Basic Information

Insect: Pseudomyrmex dendroicus
Gene Symbol: stc
Assembly: GCA_014825645.1
Location: QVNZ01019337.1:1057-5164[+]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 1.5 1.9e+04 -3.7 1.1 15 19 499 503 498 503 0.82

2 13 0.031 4e+02 1.7 0.2 4 10 532 538 531 540 0.95

3 13 1.3e-06 0.017 15.7 12.5 3 18 547 562 546 563 0.94

4 13 3.1e-07 0.004 17.7 15.7 1 18 599 616 599 617 0.98

5 13 4.8e-07 0.0062 17.1 8.4 1 19 655 673 655 673 0.96

6 13 0.96 1.2e+04 -3.1 0.7 5 10 702 707 702 707 0.94

7 13 1.5e-05 0.19 12.3 12.0 4 18 720 734 713 735 0.86

8 13 0.008 1e+02 3.6 11.3 1 11 775 785 775 797 0.88

9 13 3e-09 3.9e-05 24.1 13.8 1 18 802 819 802 820 0.97

10 13 1.9 2.5e+04 -4.0 0.6 6 10 849 853 849 854 0.82

11 13 0.9 1.2e+04 -3.0 4.3 14 19 872 877 865 877 0.75

12 13 1.6e-07 0.0022 18.5 9.4 1 16 913 928 913 938 0.87

13 13 4.7e-05 0.62 10.7 14.9 1 19 945 964 945 964 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	1.5	1.9e+04	-3.7	1.1	15	19	499	503	498	503	0.82
2	13	0.031	4e+02	1.7	0.2	4	10	532	538	531	540	0.95
3	13	1.3e-06	0.017	15.7	12.5	3	18	547	562	546	563	0.94
4	13	3.1e-07	0.004	17.7	15.7	1	18	599	616	599	617	0.98
5	13	4.8e-07	0.0062	17.1	8.4	1	19	655	673	655	673	0.96
6	13	0.96	1.2e+04	-3.1	0.7	5	10	702	707	702	707	0.94
7	13	1.5e-05	0.19	12.3	12.0	4	18	720	734	713	735	0.86
8	13	0.008	1e+02	3.6	11.3	1	11	775	785	775	797	0.88
9	13	3e-09	3.9e-05	24.1	13.8	1	18	802	819	802	820	0.97
10	13	1.9	2.5e+04	-4.0	0.6	6	10	849	853	849	854	0.82
11	13	0.9	1.2e+04	-3.0	4.3	14	19	872	877	865	877	0.75
12	13	1.6e-07	0.0022	18.5	9.4	1	16	913	928	913	938	0.87
13	13	4.7e-05	0.62	10.7	14.9	1	19	945	964	945	964	0.96

Sequence Information

Coding Sequence: ATGGCCACCTGGGACGGCTCGTGCCCAGAAGATCCAAATACCCTCGTGTACAGCAACCAGAATACATCTGGCAACACTGCGAATAACTGGCCACATTTCGCCAACAATATCGCGTGTCTGCAGAACGTGCCTGCGGAAAATTATTACACAAGAAACGGCAGTCGGTATCCATATCAAGAGTGCGAGCAGACCGGGTCTACCGTCGCGTTTTGGCACTCGTCGAACGCAATGTCTTTAGGACATAACCACCAGGAATGTCTATTGCCAAACATCGCATCTATCAGTGCACAAATGTCAAGCAACAATTTTCAACACTCCATGAGTGATATTCCTTCGACATCTTTAAACAATGTGTCATCGTCTTCTAGTGACAATTACGATAAATCAAAGTGGATGAACAGCCCGATGATCAAACATGTTCCAGCTGCAGGAAGCGATAGTGTTTTGTTTGACATAGTAGAGAACTCAACTTTGCATCCTTCAGCTAATGAATTTGTGCCGAACAATATCAAGCCAAGAAAAGAGAAATTTAATAAAAGGAACAGGTATAATGATGTAGTAGATAATACTTCCGATGCTGGTAGACAAAACTTCAGATCCAAGTCATTTCCCAAGAATGCATACTTGTCAGATAATAGATACAAGAATAATTATAACTATAGTAATAAGTTTTACTGTTCTACTAAAAAGGATGTGAATTACAAACAGAAGAATTTTCAAGATGCACAGATTCCACCAAAATCTAGCTACAAAGATACTCATAGAACTCACAACACAAAGAATTTCAACAAATTTCAAAACAGCAGATATTACAACAACAGAAAGTATCAGTCAAACTCTTCTCTTGCAAAACAGAATGCTTTTGATGAAAGTTTTACATCAACAACTAAATTCACAGATATATCAAATACTCAAGATAATATATCTAGGTCTTCTAATAAAGAGATACGAGAAAACAATTCATCTTTGAGTATGAAACATAACATAAATGAAGAGAAGACACTTGTGCACCAAAAAAGTAATAATTCTGAAAATGCATTGTCGGATGTTTCCGATATACAACAAAATAAATCTAAGCGATTACCTGCTAATGGATCTAATTATTACAAGTACAATTTTAATGATACACAAACTGAATTCAGTCCTAAACGTAGAACGGCAACTTTGACGAAGTGCACATATAGAAGAAACAATGAAGCGATATCAAATCAAAAAGAGACACAAGTAGATAATTGGAGAAATAGAACAGAGAAAGATGAGATGGCACAAGCACAAAGAAAAAATCCGAAGAAAAAATACGAAAATGATAATCATGTGAGTCAAAGAGAAAGATTAACGGAACAGTTGAACAAAGGAAGGTTGGAGTGTCTAGTTTGTTACGAGCATATCAGACAAACCGATTATGTTTGGTCCTGCAGTAATTGTTATCATGTGTTGCATCTGAAATGCATCAAGAAGTGGGCAAGATCCTCACAAAGTGACAACGGTTGGAAGTGTCCGGCTTGTCGGGACGTCAGCTTCCAAGTTCCTGAAGATTACTTTTGCTTTTGTGGAAAGATGAAAATGCCGCAGTGGAATCGCAGAGACGCGGCGCATACATGTGGCAGGATTTGTGGTCGAAAATTGACAAAAAATTGCAATCATAAATGCATTTTGCTTTGCCATCCTGGCTCTTGTCCGCAGTGCGAGGCAATGGTGACTAAGTATTGCGGCTGCGGAAGAACATCGCAGATGCTTCTGTGCAGTACTCAACAGTTGTTATTGTGCGATTCGATATGCAACAAGATTCTGTCGTGCGGCAAACATTTCTGCCAGAAGAAATGCCATCATGGAGAGTGCGAACCTTGCGATAAAACTGTACAGCAAACCTGCTTTTGTGGAAAAAAAACACAAGAAGTGCTTTGTCGAGCCAACGTCACGGATATGTATTGCTGTAACAATATCTGTAATAAACCGTTGGACTGCGGAAAGCATTATTGTCAAAAAGTCTGTCATTTGGAGCCCTGCGAGTTTTGCAGCCTGGTGCCGGAAAGAGTTACTGTGTGTTGCTGCGGTCAAACACCTTTAACAGAAAAGAGAGAGAGCTGCTTAGATTCTGTGCCCACTTGCGATAAAATCTGTTCCAAATCTCTGGCTTGCGGTCGACCTAGTAAGCCGCATACCTGCAAGATGCAATGTCACGCTGGCGATTGTCCCGAGTGTGATTTAAGCACGGAAGTCAAATGCCGATGTGGTAACATGAATCGTGAGATTCCTTGCCGAGACTTAACGAGCAAGGCCGATGACGCGCGTTGCGCGAAGCGTTGCAAGAAGAAGAGGTCCTGTGGCAAGCATAACTGCAATCAACTCTGTTGCATCGATATTGAGCATATTTGTCCGTTACCGTGCTCAAAGACTCTAAGCTGCGGTCGTCACAAGTGTCAGGAAAGATGTCACATAGGACGATGTCCTCCCTGTTTACAGAGCAGTTTCGATGAATTGTACTGTGAGTGCGGCGCTGAAGTGATCTACCCGCCGGTACCGTGCGGCACAAGAAGACCTGTTTGCAATCGACCTTGTTCACGTCCACATTCCTGCGCTCATGAAGTGTTGCATAATTGTCACAGCGAACTTACTTGTCCACCCTGTACTGTGCTGACTCAGAGATGGTGCCACGGTAAACACGAACTCAGAAAAGCCGTACCATGTCACGTGACTGAGCTTTCATGCGGTCTGCCCTGCAACAAGCAGCTGTCATGCGGACGGCACAAATGCATCAGAATGTGCCACGCTGGATCGTGTGAAATATCTGGACAACAATGCACGCAGCCTTGTGGCACAAAAAGAGAACTATGCGGGCATATCTGCGGCGCTCCGTGCCACGAAGGCAAGTGTCCGGAGTTACCATGTAAAGAAGTCGTCAAGGTTACATGTCAGTGTGGACATAGGACTTCGAGTCGTGTCTGCAATGAGAATGCACAAGAATATATGAAGATAATGAGCGTCCTGGTGGCTAGCAAAATGAAGGACATGCAGCTTGGCCATTCGATCGATTTGGAAGAAGTGTACGGACAGAATGCAAAGAAGCAAAATCAGCTGAAGACTTTAGAGTGCAATGACGAGTGCAAAACAATCGAGAGAAACAGAAGACTCGCGTTGGGACTGCAGATCGTCAATCCAGATTTGAGCGGCAAATTGATGCCTCGATATACCGATTACTTGAAACAGTGGGCTAAAAGAGATCCGTTCTTCTGTCAAATGGTTCATCATAAACTGACGGAATTGGTACAATTAGCGAAAACTTCCAAGCAGAAATCCCGGAGTTATTCGTTCGAAATTATGAATCGGGAAAAACGCCATTTCGTTCATGAGTTGTGTCAGCATTTTGGCTGCGAAAGTCAAGCATACGACGAGGAGCCAAAGAGAAATGTCGTTGCCACTGCCGTAAAAGATAAGGTAACAGAGCTTTGTGTAATTAAGAGTATATAA
Protein Sequence: MATWDGSCPEDPNTLVYSNQNTSGNTANNWPHFANNIACLQNVPAENYYTRNGSRYPYQECEQTGSTVAFWHSSNAMSLGHNHQECLLPNIASISAQMSSNNFQHSMSDIPSTSLNNVSSSSSDNYDKSKWMNSPMIKHVPAAGSDSVLFDIVENSTLHPSANEFVPNNIKPRKEKFNKRNRYNDVVDNTSDAGRQNFRSKSFPKNAYLSDNRYKNNYNYSNKFYCSTKKDVNYKQKNFQDAQIPPKSSYKDTHRTHNTKNFNKFQNSRYYNNRKYQSNSSLAKQNAFDESFTSTTKFTDISNTQDNISRSSNKEIRENNSSLSMKHNINEEKTLVHQKSNNSENALSDVSDIQQNKSKRLPANGSNYYKYNFNDTQTEFSPKRRTATLTKCTYRRNNEAISNQKETQVDNWRNRTEKDEMAQAQRKNPKKKYENDNHVSQRERLTEQLNKGRLECLVCYEHIRQTDYVWSCSNCYHVLHLKCIKKWARSSQSDNGWKCPACRDVSFQVPEDYFCFCGKMKMPQWNRRDAAHTCGRICGRKLTKNCNHKCILLCHPGSCPQCEAMVTKYCGCGRTSQMLLCSTQQLLLCDSICNKILSCGKHFCQKKCHHGECEPCDKTVQQTCFCGKKTQEVLCRANVTDMYCCNNICNKPLDCGKHYCQKVCHLEPCEFCSLVPERVTVCCCGQTPLTEKRESCLDSVPTCDKICSKSLACGRPSKPHTCKMQCHAGDCPECDLSTEVKCRCGNMNREIPCRDLTSKADDARCAKRCKKKRSCGKHNCNQLCCIDIEHICPLPCSKTLSCGRHKCQERCHIGRCPPCLQSSFDELYCECGAEVIYPPVPCGTRRPVCNRPCSRPHSCAHEVLHNCHSELTCPPCTVLTQRWCHGKHELRKAVPCHVTELSCGLPCNKQLSCGRHKCIRMCHAGSCEISGQQCTQPCGTKRELCGHICGAPCHEGKCPELPCKEVVKVTCQCGHRTSSRVCNENAQEYMKIMSVLVASKMKDMQLGHSIDLEEVYGQNAKKQNQLKTLECNDECKTIERNRRLALGLQIVNPDLSGKLMPRYTDYLKQWAKRDPFFCQMVHHKLTELVQLAKTSKQKSRSYSFEIMNREKRHFVHELCQHFGCESQAYDEEPKRNVVATAVKDKVTELCVIKSI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01270196;
90% Identity: iTF_01267955;
80% Identity: -