Basic Information

Insect: Pseudomyrmex cubaensis
Gene Symbol: stc
Assembly: GCA_014825685.1
Location: QVOA01011093.1:5137-9974[-]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 1.5 1.8e+04 -3.8 1.1 15 19 501 505 500 505 0.82

2 12 0.033 3.9e+02 1.6 0.2 4 10 534 540 533 542 0.95

3 12 1.4e-06 0.016 15.6 12.5 3 18 549 564 548 565 0.94

4 12 3.3e-07 0.0039 17.6 15.7 1 18 601 618 601 619 0.98

5 12 1.1e-06 0.013 15.9 8.1 1 19 657 675 657 675 0.96

6 12 1 1.2e+04 -3.2 0.7 5 10 704 709 704 709 0.94

7 12 1.3e-05 0.15 12.5 11.8 4 18 722 736 715 737 0.86

8 12 0.0089 1.1e+02 3.4 11.3 1 11 777 787 777 799 0.88

9 12 3.2e-09 3.8e-05 24.0 13.8 1 18 804 821 804 822 0.97

10 12 0.95 1.1e+04 -3.1 4.3 14 19 874 879 867 879 0.75

11 12 1.7e-07 0.002 18.5 9.4 1 16 915 930 915 940 0.87

12 12 5e-05 0.6 10.6 14.9 1 19 947 966 947 966 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	1.5	1.8e+04	-3.8	1.1	15	19	501	505	500	505	0.82
2	12	0.033	3.9e+02	1.6	0.2	4	10	534	540	533	542	0.95
3	12	1.4e-06	0.016	15.6	12.5	3	18	549	564	548	565	0.94
4	12	3.3e-07	0.0039	17.6	15.7	1	18	601	618	601	619	0.98
5	12	1.1e-06	0.013	15.9	8.1	1	19	657	675	657	675	0.96
6	12	1	1.2e+04	-3.2	0.7	5	10	704	709	704	709	0.94
7	12	1.3e-05	0.15	12.5	11.8	4	18	722	736	715	737	0.86
8	12	0.0089	1.1e+02	3.4	11.3	1	11	777	787	777	799	0.88
9	12	3.2e-09	3.8e-05	24.0	13.8	1	18	804	821	804	822	0.97
10	12	0.95	1.1e+04	-3.1	4.3	14	19	874	879	867	879	0.75
11	12	1.7e-07	0.002	18.5	9.4	1	16	915	930	915	940	0.87
12	12	5e-05	0.6	10.6	14.9	1	19	947	966	947	966	0.96

Sequence Information

Coding Sequence: ATGGCTACCTGGGACGGCTCGTGTCCAGAAGATCCAAATACCCTCGTGTACAGTAACCAGAATACATCTGGCAACACTGCGAATAACTGGCCACACTTCGCCAACAATATCGCGTGTCTGCAGAACGTGCCTGCGGAAAGTTATTACACAAGAAACGGCAGTCGGTATCCATACCAAGAGTGCGAGCAAACCGGGTCTACCGTCGCGTTTTGGCACTCATCGAACACAATGTCTTTAAGACATAGCCACCAGGAATATCTATTGCCAAACATCGCGTCTATCAGTGATGCACAAATGTCAAGCAACAATTTTCAACACTCAATGAGTGATATCCCTTCGACATCTTTAAACAATGTGTCGTCGTCTTCCAGTGACAATTACGATAAATCAAAGTGGATGAACAACTCGATGGTCAAGCATGTTTCAGCCACAGGAAGCGATAGTGTTTTGTTTGACATAGTAGAGAACTCAACTTTACATCCTTCAGCTAATGAATTTGTGCCAAACAATATCAAGCCAAGAAAAGAGAAATTTAATAAAAGGAACAGGTATAATGATGTAGTAGATAATACTTCCGATGCTGGTAGGCAAAACTTCAGATCCAAGTCATTTCCCAAGAATGCATACTTGTCAGATAATAGATACAAGAATAATTATAACTATAGTAACAAGTTTTACTGTTCTGCTAAGAAGGATGTGAATTGCAAACAGAAGAATTTTCAAGATGCACAGATTCCACCAAAATCCAGCTACAAAGACACTCATAGAACTCACAACACAAGAAATTTCAACAAATTTCAAAACAGCAGATATTACAACAACAGAAAGTATCAGTCAAACTCTTCTCTTGCAAAACAGAATGCTTTTGATGAAAGTTTTACATCAACAACTAAATTCACAGATATATCAAATACTCAAGATAATATATCTAGGTCTTCTAATAAAGAGATACGAGAAAACAATTCATCTTTGAGTATGAAACATAACATAAATGAAGAGAAGACACTTGTGCAGCAAAAAAGTAATAATTCTGAAAATGCATTGTCGGATGTTTCCGATATACAACAAAATAAATCTAAGCGATTACCTGCTAATGGATCTAATTATTACAAGTACAATTTTAATGATACACAAACTGAATTCAGTCCTAAACGTAGAACGGCAGCAACTTTGATGAAGTGTACGTATAGAAGAAACAATGAAGCGATTTCAAATCAAAAAGAGACACAAGTAGATAATTGGAGAAATAGAACAGAGAAAGATGAGACGGCACAAGCACAAAGAAAACATCCCAAGAAAAAATACGAAAATGATAATCATGTGAGTCAAAGAGAAAGATTAACAGAACAGTTGAACAAAGGAACGTTGGAGTGTCTAGTTTGTTATGAGCATATCAGACAAACCGATTATGTTTGGTCCTGCAGTAATTGTTATCATGTGTTGCATCTGAAATGCATCAAGAAGTGGGCAAGATCCTCACAAAGTGACAACGGTTGGAAGTGTCCGGCTTGTCGGGACGTCAGTTTCCAAGTTCCTGAAGATTACTTTTGCTTTTGTGGAAAGATGAAAATGCCGCAGTGGAATCGCAGAGACGCGGCGCATACATGTGGCAGGATTTGCGGTCGAAAATTGACAAAAAATTGCAATCATAAATGCATTTTGCTTTGCCATCCTGGCTCCTGTCCGCAGTGCGAGGCAATGGTGACTAAGTATTGCGGCTGCGGAAGAACATCGCAGATGCTTCTGTGCAGCACTCAACAGTTGTTATTGTGCGATTCGATATGCAACAAGATTCTGTCGTGCGGCAAACATTTCTGCCAGAAGAAATGCCATCATGGAGAGTGCGAACCTTGCGACAAAACTGTACAGCAAACCTGCTTTTGTGGAAAAAAAACACAAGAAGTGCCTTGTCGAGCCAACGTCACGGATATGTATTGCTGTAACAATGTCTGTAATAAACCGTTGGACTGCGGAAAGCATTATTGTAAAAAAGTCTGTCATTTGGAGCCCTGCGAGTTTTGCAGCCTGGCGCCGGAAAGAGTTACTGTGTGTTGCTGCGGTCAAACACCTTTAACAGAAAAGAGAGAGAGCTGCTTAGATTCTGTGCCCACTTGCGATAAAATCTGTTCCAAATCTCTGGCTTGCGGTCGACCTAGTAACCCGCATACCTGCAAGATGCAATGTCACGCTGGCGATTGTCCCGAGTGCGATTTAAGCACGGAAGTCAAATGCCGATGTGGTAACATGAATCGTGAGATTCCTTGCCGAGACTTGACGAGCAAAGCCGATGACGCGCGTTGCGCGAAGCGTTGCAAGAAGAAGAGGTCCTGTGGCAAGCATAACTGCAATCAACTCTGTTGCATCGATATTGAGCATATTTGTCCGTTACCGTGCTCAAAGACTCTAAGCTGCGGTCGTCACAAGTGTCAGGAAAGATGTCACATAGGACGATGTCCTCCTTGTTTACAGAGCAGTTTCGATGAATTGTACTGTGAGTGCGGCGCTGAAGTGATCTACCCGCCAGTACCGTGCGGCACAAGAAGACCTGTTTGCAATCGACCTTGTTCACGTCCACATTCCTGCGCTCATGAAGTGTTGCATAATTGTCACAGCGAACTTACCTGTCCACCTTGTACTGTGCTGACTCAGAGATGGTGCCACGGTAAACACGAACTTAGAAAAGCCGTACCATGTCACGTGACTGAGCTTTCATGCGGTCTGCCTTGCAACAAGCAGCTGTCATGCGGACGGCACAAATGCATTAGAATGTGCCACGCTGGATCGTGTGAAATATCTGGGCAACAATGCACGCAGCCTTGTGGCACAAAAAGAGAACTATGCGGGCATATCTGCGGCGCTCCGTGCCATGAAGGCAAGTGTCCGGAGTTACCATGTAAAGAAGTGGTCAAGGTTACATGTCAGTGTGGACATAGGACTTCGAGTCGTGTTTGCAATGAGAATGCACAAGAATATATGAAGATAATGAGCGTCCTAGTGGCTAGCAAAATGAAGGACATGCAGCTTGGCCATTCGATCGATTTGGAAGAAGTGTACGGACAGAATGCAAAGAAGCAAAATCAGCTGAAGACTTTGGAGTGCAATGACGAGTGCAAAACGATCGAGAGAAACAGAAGACTCGCGTTGGGACTGCAGATCGTCAATCCAGATTTGAGCGGCAAATTGATGCCTCGATATACCGATTACTTGAAACAGTGGACCAAAAGAGATCCGTTCTTCTGTCAAATGGTTCATGATAAACTGACGGAATTGGTACAATTAGCGAAAACTTCCAAGCAGAAATCCCGGAGTTATTCGTTCGAAATTATGAATCGTGAAAAACGCCATTTCGTTCACGAGTTGTGTCAGCATTTTGGCTGCGAAAGTCAAGCATACGACGAGGAGCCGAAGAGAAATGTCGTTGCCACTGCCGTAAAAGATAAGTGTTGGTTACCGAGCTATAGCTTACTGGAGATAGTGCAGAGGGAGAAGGGACAAAGAAAAGTTCCAGGGCCGGTACTGAACACTTCGATGGGAAATAGCTCTACAAAGACTGTTCTTTCGTTACCTGCGAAACAAGGTCAACAATCGATGTCATTGTCAACAACTATAAAAACTCCCGACAAAGAAATCGATTATTTTGAATATCAAGGATAA
Protein Sequence: MATWDGSCPEDPNTLVYSNQNTSGNTANNWPHFANNIACLQNVPAESYYTRNGSRYPYQECEQTGSTVAFWHSSNTMSLRHSHQEYLLPNIASISDAQMSSNNFQHSMSDIPSTSLNNVSSSSSDNYDKSKWMNNSMVKHVSATGSDSVLFDIVENSTLHPSANEFVPNNIKPRKEKFNKRNRYNDVVDNTSDAGRQNFRSKSFPKNAYLSDNRYKNNYNYSNKFYCSAKKDVNCKQKNFQDAQIPPKSSYKDTHRTHNTRNFNKFQNSRYYNNRKYQSNSSLAKQNAFDESFTSTTKFTDISNTQDNISRSSNKEIRENNSSLSMKHNINEEKTLVQQKSNNSENALSDVSDIQQNKSKRLPANGSNYYKYNFNDTQTEFSPKRRTAATLMKCTYRRNNEAISNQKETQVDNWRNRTEKDETAQAQRKHPKKKYENDNHVSQRERLTEQLNKGTLECLVCYEHIRQTDYVWSCSNCYHVLHLKCIKKWARSSQSDNGWKCPACRDVSFQVPEDYFCFCGKMKMPQWNRRDAAHTCGRICGRKLTKNCNHKCILLCHPGSCPQCEAMVTKYCGCGRTSQMLLCSTQQLLLCDSICNKILSCGKHFCQKKCHHGECEPCDKTVQQTCFCGKKTQEVPCRANVTDMYCCNNVCNKPLDCGKHYCKKVCHLEPCEFCSLAPERVTVCCCGQTPLTEKRESCLDSVPTCDKICSKSLACGRPSNPHTCKMQCHAGDCPECDLSTEVKCRCGNMNREIPCRDLTSKADDARCAKRCKKKRSCGKHNCNQLCCIDIEHICPLPCSKTLSCGRHKCQERCHIGRCPPCLQSSFDELYCECGAEVIYPPVPCGTRRPVCNRPCSRPHSCAHEVLHNCHSELTCPPCTVLTQRWCHGKHELRKAVPCHVTELSCGLPCNKQLSCGRHKCIRMCHAGSCEISGQQCTQPCGTKRELCGHICGAPCHEGKCPELPCKEVVKVTCQCGHRTSSRVCNENAQEYMKIMSVLVASKMKDMQLGHSIDLEEVYGQNAKKQNQLKTLECNDECKTIERNRRLALGLQIVNPDLSGKLMPRYTDYLKQWTKRDPFFCQMVHDKLTELVQLAKTSKQKSRSYSFEIMNREKRHFVHELCQHFGCESQAYDEEPKRNVVATAVKDKCWLPSYSLLEIVQREKGQRKVPGPVLNTSMGNSSTKTVLSLPAKQGQQSMSLSTTIKTPDKEIDYFEYQG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01270196;
90% Identity: iTF_01268677; iTF_01269482; iTF_01270196;
80% Identity: -