Hdys020884.1
Basic Information
- Insect
- Hecatera dysodea
- Gene Symbol
- lov
- Assembly
- GCA_905332915.1
- Location
- HG995304.1:5596363-5598459[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.6e-18 1.7e-15 57.5 0.0 1 44 58 101 58 102 0.96
Sequence Information
- Coding Sequence
- ATGGACTCTCCTCTGGGACTGTTCCCGCCGGGCATGGAGCACAAGATGTACCCGATGATGGACGTGGAACACCGCGCGCCGCTCGACGCACAACTATTTACCAATGTGAAAAAGAAATGGCGACCGAAGGGCCAGCACAGCGCGCCGCGCGGCGGTCCACCTCGGTCGTGGACGAACGCCGAGCTCACGGAGGCGCTGCAGCACGTGTGGAACAAGAAGATGACGACGAGCCAGGCCTCCAGGATCTTCGGCATCCCGTACAACTCGCTGCTCATGTACGTGCGCGGCAAGTACGGGAAGAGCCTCAAGCTGGAGCAGCTCAGGAAAGACTGCATCGGCGGACCTCTAGACGTGCTAAACCTTAACTCcggcaacaacaacaacaaccaaCCCTCGAGCAAACACCACGACAAAGACGACCACTCACAACGACCAGCGAGCTCCGAGCCAGACATCGCCTCGAATCCCATGTTCAATCCATTCCAGCAAGGGTTCTACCCGGAGTTCCCGCCAGGTTTTCCGATGCCGCTCAACATGCTGCATCTACTACCACCGAACGACAAAGCGCGGGAACTGTACCAGTCGATGCCGATGGCTCTGGACTCGCTGTCAGGAGTAACGAAAGAGGAGGACTGTAAGAGTGACAGGTCAAAGGAGAACTCTGCCGACGAGGAGGGCGACTCGTACCGCGCGCCCTCGCACCCGCCGCATCCGCCCGACACGCGCCAGCTGCTGCACCACAACGGACAGGACTAG
- Protein Sequence
- MDSPLGLFPPGMEHKMYPMMDVEHRAPLDAQLFTNVKKKWRPKGQHSAPRGGPPRSWTNAELTEALQHVWNKKMTTSQASRIFGIPYNSLLMYVRGKYGKSLKLEQLRKDCIGGPLDVLNLNSGNNNNNQPSSKHHDKDDHSQRPASSEPDIASNPMFNPFQQGFYPEFPPGFPMPLNMLHLLPPNDKARELYQSMPMALDSLSGVTKEEDCKSDRSKENSADEEGDSYRAPSHPPHPPDTRQLLHHNGQD*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01264319;
- 90% Identity
- iTF_00072104;
- 80% Identity
- iTF_00951713; iTF_00037697; iTF_00124163; iTF_01093955; iTF_01094820; iTF_00924517; iTF_00121321; iTF_00122281; iTF_00851689; iTF_01030121; iTF_00123274; iTF_00758058; iTF_00071307; iTF_00850543; iTF_01031055; iTF_00906034; iTF_00973682; iTF_00831092; iTF_00907799; iTF_00906971; iTF_00038621; iTF_00036543; iTF_00667263; iTF_01092992; iTF_00952610; iTF_01027220;