Basic Information

Insect: Prenolepis imparis
Gene Symbol: -
Assembly: GCA_030444845.1
Location: JAUDTA010000013.1:12415142-12423966[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 2e-05 0.0038 19.0 0.1 2 23 686 707 685 707 0.97

2 17 0.33 66 5.7 0.8 1 19 713 731 713 732 0.93

3 17 6.8 1.3e+03 1.6 0.8 2 23 740 761 739 761 0.92

4 17 0.00013 0.026 16.4 1.3 3 23 770 791 769 791 0.98

5 17 0.012 2.4 10.2 2.8 1 23 798 821 798 821 0.95

6 17 0.0001 0.02 16.8 0.7 1 23 827 850 827 850 0.94

7 17 1.8 3.6e+02 3.4 1.1 2 23 858 878 858 878 0.90

8 17 1.5e-07 2.9e-05 25.7 2.1 2 23 884 905 883 905 0.97

9 17 5.4e-06 0.0011 20.8 0.3 1 23 911 933 911 933 0.99

10 17 0.00059 0.12 14.4 2.4 2 23 945 967 944 967 0.95

11 17 0.0084 1.6 10.7 2.5 1 23 973 996 973 996 0.96

12 17 0.033 6.4 8.9 3.0 2 23 1017 1039 1016 1039 0.95

13 17 3.6e-05 0.0071 18.2 1.3 2 23 1046 1068 1045 1068 0.96

14 17 6.1e-05 0.012 17.5 1.0 3 23 1077 1097 1075 1097 0.96

15 17 0.0025 0.49 12.4 2.6 1 23 1103 1126 1103 1126 0.96

16 17 1.8 3.6e+02 3.4 3.4 2 23 1133 1154 1132 1154 0.96

17 17 0.01 2 10.5 2.6 1 23 1160 1182 1160 1182 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	2e-05	0.0038	19.0	0.1	2	23	686	707	685	707	0.97
2	17	0.33	66	5.7	0.8	1	19	713	731	713	732	0.93
3	17	6.8	1.3e+03	1.6	0.8	2	23	740	761	739	761	0.92
4	17	0.00013	0.026	16.4	1.3	3	23	770	791	769	791	0.98
5	17	0.012	2.4	10.2	2.8	1	23	798	821	798	821	0.95
6	17	0.0001	0.02	16.8	0.7	1	23	827	850	827	850	0.94
7	17	1.8	3.6e+02	3.4	1.1	2	23	858	878	858	878	0.90
8	17	1.5e-07	2.9e-05	25.7	2.1	2	23	884	905	883	905	0.97
9	17	5.4e-06	0.0011	20.8	0.3	1	23	911	933	911	933	0.99
10	17	0.00059	0.12	14.4	2.4	2	23	945	967	944	967	0.95
11	17	0.0084	1.6	10.7	2.5	1	23	973	996	973	996	0.96
12	17	0.033	6.4	8.9	3.0	2	23	1017	1039	1016	1039	0.95
13	17	3.6e-05	0.0071	18.2	1.3	2	23	1046	1068	1045	1068	0.96
14	17	6.1e-05	0.012	17.5	1.0	3	23	1077	1097	1075	1097	0.96
15	17	0.0025	0.49	12.4	2.6	1	23	1103	1126	1103	1126	0.96
16	17	1.8	3.6e+02	3.4	3.4	2	23	1133	1154	1132	1154	0.96
17	17	0.01	2	10.5	2.6	1	23	1160	1182	1160	1182	0.98

Sequence Information

Coding Sequence: ATGATTCTGAAGAAAATGCCAAATTCTGAAATCAATAAGCGTGACCATAATTATAGTGAATCGGAACCACCTCAGAATGTCAACGTATTCGATAGTAGTATCAGCAAGGAATCCAAAATCGCACCTATTGTTGGCCAGATTAAAGATATCGATGAATTGAAAAAGATCGCACCGCGCGTCCGACTACAAGATGCCAAAAGCTTGAATGAATTGACGAGGATCTCATCCTTAAGTAACAACAACAGTAAATTGCAGCAGAGCAAGTTGTCCATTTCTGAGAGAACTCAGcaagaattgaaaaaatattgccgTACTTGTGCTGGTCTAAAATTACCCTTGGTCGACATCTTTAGCGAGAAGGGTATCAAATTACGATTGAGTCAACAAATCAAACACCTGGAAGTGAATCCTTACGATAGCCTTTCTACACAGATGTGCATGGACTGCATCTGTGATCTTAAAATAAGTTACAAATTCTTCATGCAGATCAAAAAGGCCGAGATGAAACTCAAGTCCATTCACGTCAACTTGACAACCGAGAACGTCGCAAAGAAATCTGAATCGATTAATGAGTCTTTGATAACAAAACAAGAAAAGCAATCATTCTGCCtagaaacaaaGCAAGAGCGCgaattattttctacaattcAACAAAATCAATCTTTACTATCGACGATGCAAGAAAGccaaataattatgaaaaatcaaGAAGATAACTCTGCTCCTAAAATTTGTGCCATCTTTTCGTTGAAGAACGAGTCAAAGATGGAAGAAGAAGGGGCGCAGGTGGGCGGAGGAATCTTCGAGGAGATAGCAGAGGGAGGAGAGGACGAAGAATCTATCGAGGAATTTGATCCCGAAGATCCGGCTTTCCAGGAAGatgatgaagaagaagaattttCAAGATCTCCAACTGCTATTTACAAGTATGACATGTTGGCGAAGTCTTATGTGAGAGTGGAAGGAGGTGAGGAGGAGGTAGTCTCCGTGAAATCTGGAATCACTCAGACTTCAGAGGGTGAAGGAGAAAATCAAAGAGAGGGAATGAGACAACCAAATATCCTGAAAAGAAGATTATTGATGTCAACACCAACGGTAAAAAGTGGGGAAAAGGATGGAATGCAGAATGAAGTGGAAAGTACTCTAAAGGAGTGCAAGGTGCAAAAGTTAGACTTGAATAATCCACTGAGTGTGAATAATGCTCCACACGAGGATGGAGTTATGTATGTGACTGTGAAGGGGTCTAAGCCAAACGAGATTTTATTGGTAAAGGTCAAGAAAATGGATAAACCTATGGAATCAAAACGCATGGTATCCTCCACCGATCTCAAGCCCGTTGAACGTTTCCTCAAACGCTATGATACTTTGACATCGCGGGACTCCTCCTCATCTCGATCCCGTCCTGATGCCCGCGAGCAAATAATTGAGGAACAAATCGAAGAATATAAGAAGAAACGCGAGAAAGTTCTCGGAAATCAATCGGCAAAGACCTGTATCGTGAACGAGATGGAAAAAGAAatacaagaagaaaaaatttggGCTACATTAAACCCCAAAAAGgcggaaaaagaaataatagctTCCAcaaaagaaggaaaagaagaagaagaagaagaaaaagagaaagaagaaaaagaaaaagagaaagaagaaaaagcagAAGAAAGCGAAAAAGTCGAAGAAAATCAGGAGAAGGTCAAATTGGATAGTTCGAAGgaatatatttcaaagttATCGAGAGAAAAGTTGAAATGGGAAGAAGCAAagcagaagaaagaaaatctaCAAAACCAGGACTCGGATGAAACATATACCGAGGGAAATTTGGAAAAGTTGACGAGAATCTTGggagagaaggaggagaatCTGCAGGAATTCCAGGAATACTTGAAGCAGCGCAAGATCGTTCTCCCTCGTCTCAAGGACGAGGACGTAATCTCTCTCTACGAAGATCGTTTTTCCGTCACGTTAAAATTACCTCCTAAACCCCTGCCAGATCTTATAGACATTCAACCATCTGCTGTTGATTCGCTTTCCATAGAGCGCTGCTATCTGGAATGCGATTACTGCCCGGAAACTTTTTCCAATCGCGATGTCCTCGAGGAGCATTTGAAAACTCACGACTACCGCATCCTTCACTATTGCGACGACTGTGAAGAAGAATTTCCAACTAATAAAGCGAAGAGAAATCATAATGTCATTTGTGTAAGAAAgttaatttgcaaatattgCGATCTACTTTTGGATTCTAGAGGGAAAAAACGTCAACATGAACAGAAACATATCGATGCCCTTTATGGACAACTTTGCGAAGTTTGCGGAGAAAGATTCAAACATCAGGGAACCCTGGACCAGCACTTGAAAACACAACATACGattttagagaaaatttaTCAGTGTTCAAAGTGTCCAAAAAAATTTGCTTTCAAGCAAAAACTAAGTTTTCATCTAAAATCAGTGCACACAACTTTAAGAGCATATCTTTGCGAAGATTGCGGTGCAGATTTTAAGAATCCTGCGAGTTTAAGGCATCACAGAATTAGAAAACATCAACCAGTCGGAAACAAGAGGGAATGTCCCGTTTGCAGGAAATTAGTGCCGTTCTACAGTTTATCCAAACACATGCACACGCACAAAGCTTATAGTATTCAGTGTCCGCATTGCGACAAGATGTTTAAAAATAGCTCGACCTTGAAGCAACATGTAAGGATTCATGAAGATCAAAGACAGTATCGTTGCGATACTTGTGGGGTTGGATTTAATCGAAGAGATGGTTTGAGGTTGCACATGAAGGTGCATGAAAAAACGGGTAGCAGGGGCTTGAAAGAATGTTCTTGTCAAGTTTGTGGAGAAAAATTCCCGAATCATTCGACTTTGGTAATTCATAGAAATAGAGTACACAAGGATGGCAGGCAATATACATGTCACATTTGTAATAGGTCAATGATTTCGACAAGATCGCTCGAATGGCACATGTCACACATTCATAACGAATCGATGCCAGGAATTACCCGCGACGAGTCCGGTCCGCCTGAAAAGAAACGGGTTTCCTGTTATCACTGCAGTAAGACCTTCAAAACAGAGATGATACTGCGCACACACATAAAAAACACTCATATGGAAAAAGATCCAATGAAGTGTACCGACTGCGACCAGACTTTTACATCCGAAGTACGTCTACGTCATCATATGATGGTCGCACACAACCGTCTCGAGGGCACTTTAGCGTGTCCGCACTGTCCGAAACGATTCGTCAACCAATTAAGGCTAAAGACTCACATGATTTCTCATTCCGAGGATAGGCCGTACACTTGTGAGATTTGCGGTTTCAACTTGAAAACGAAGATCCAACTCCTTAAGCATCATCAAAACCGACACAGCGACGAAAGACCTTTACAGTGCAGATTTTGTCCCTGGCGATGCAAGCAGGTGAGTGCCCTTGTCTGTCATGAGCGCACGCACACGAATGAGCGTCCGTATTCGTGTAGTGTATGTCGCCAACGCTTCAAATATCTCGGCGATAAAAACAAGCATGAGCGACGTCACGAGAGCCTTGGCGGTTCGGGATTCAAACGCATTGTACCAGGAAGGAATATTAAACCAAAAGTGCGCGCCGACGATTCCTCTGGCTCCGAGCAGGAGCAAAACTCGATCAAGCATTCTGTAAATCAGCAGATTGAAGAGCAATATGGAGAAGAGCAACAGGGAGAAGAACAATATGATGAACAGGAAGAACAGATTGTCAAATTCGAACGGGAACAGATCGTCAAGTTTGAGGATCAGGAGGAGGAGTATGAACAAGTGTACGAGCAGGAATATGAAGAAACTTCAAGAGAGGCATCGGAGGTAGCTACAGAAGTAATCATGAACATAGAGGATTCCAATGTGTACACGGAGGAAGTTACGGCCGACAATATGGAACCCAGTTCTGAAATTATGACGGATGAAATTATGACGAATGATATTCTGCAATCCGGTACCGCTGTAGTGCATCTACAACGGCAGGACGATACGGGGAAGATTCAAGTGATACCCGTGATGCTATCCTTGCCCGATCTGTCCGACACGAATGCCGAAGTCAATCTCGCAACCGCGTCTatcatgtataataattag
Protein Sequence: MILKKMPNSEINKRDHNYSESEPPQNVNVFDSSISKESKIAPIVGQIKDIDELKKIAPRVRLQDAKSLNELTRISSLSNNNSKLQQSKLSISERTQQELKKYCRTCAGLKLPLVDIFSEKGIKLRLSQQIKHLEVNPYDSLSTQMCMDCICDLKISYKFFMQIKKAEMKLKSIHVNLTTENVAKKSESINESLITKQEKQSFCLETKQERELFSTIQQNQSLLSTMQESQIIMKNQEDNSAPKICAIFSLKNESKMEEEGAQVGGGIFEEIAEGGEDEESIEEFDPEDPAFQEDDEEEEFSRSPTAIYKYDMLAKSYVRVEGGEEEVVSVKSGITQTSEGEGENQREGMRQPNILKRRLLMSTPTVKSGEKDGMQNEVESTLKECKVQKLDLNNPLSVNNAPHEDGVMYVTVKGSKPNEILLVKVKKMDKPMESKRMVSSTDLKPVERFLKRYDTLTSRDSSSSRSRPDAREQIIEEQIEEYKKKREKVLGNQSAKTCIVNEMEKEIQEEKIWATLNPKKAEKEIIASTKEGKEEEEEEKEKEEKEKEKEEKAEESEKVEENQEKVKLDSSKEYISKLSREKLKWEEAKQKKENLQNQDSDETYTEGNLEKLTRILGEKEENLQEFQEYLKQRKIVLPRLKDEDVISLYEDRFSVTLKLPPKPLPDLIDIQPSAVDSLSIERCYLECDYCPETFSNRDVLEEHLKTHDYRILHYCDDCEEEFPTNKAKRNHNVICVRKLICKYCDLLLDSRGKKRQHEQKHIDALYGQLCEVCGERFKHQGTLDQHLKTQHTILEKIYQCSKCPKKFAFKQKLSFHLKSVHTTLRAYLCEDCGADFKNPASLRHHRIRKHQPVGNKRECPVCRKLVPFYSLSKHMHTHKAYSIQCPHCDKMFKNSSTLKQHVRIHEDQRQYRCDTCGVGFNRRDGLRLHMKVHEKTGSRGLKECSCQVCGEKFPNHSTLVIHRNRVHKDGRQYTCHICNRSMISTRSLEWHMSHIHNESMPGITRDESGPPEKKRVSCYHCSKTFKTEMILRTHIKNTHMEKDPMKCTDCDQTFTSEVRLRHHMMVAHNRLEGTLACPHCPKRFVNQLRLKTHMISHSEDRPYTCEICGFNLKTKIQLLKHHQNRHSDERPLQCRFCPWRCKQVSALVCHERTHTNERPYSCSVCRQRFKYLGDKNKHERRHESLGGSGFKRIVPGRNIKPKVRADDSSGSEQEQNSIKHSVNQQIEEQYGEEQQGEEQYDEQEEQIVKFEREQIVKFEDQEEEYEQVYEQEYEETSREASEVATEVIMNIEDSNVYTEEVTADNMEPSSEIMTDEIMTNDILQSGTAVVHLQRQDDTGKIQVIPVMLSLPDLSDTNAEVNLATASIMYNN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00730244; iTF_01077673; iTF_00730956; iTF_01245392; iTF_00110001; iTF_00869073; iTF_00868284; iTF_00867637; iTF_00280118; iTF_00729528; iTF_00264479; iTF_00265193;
90% Identity: iTF_00868284;
80% Identity: -