Basic Information

Insect: Anoplolepis gracilipes
Gene Symbol: -
Assembly: GCA_031304115.1
Location: JAPWJP010000584.1:166395-178612[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 0.00039 0.071 14.9 0.1 2 23 660 681 659 681 0.96

2 17 0.3 54 5.8 0.8 1 19 687 705 687 706 0.93

3 17 6 1.1e+03 1.7 0.8 2 23 714 735 713 735 0.92

4 17 0.00012 0.021 16.5 1.3 3 23 744 765 743 765 0.98

5 17 0.0025 0.46 12.3 2.0 1 23 772 795 772 795 0.95

6 17 8.9e-05 0.016 16.9 0.7 1 23 801 824 801 824 0.94

7 17 1.6 2.9e+02 3.5 1.1 2 23 832 852 832 852 0.90

8 17 1.3e-07 2.4e-05 25.8 2.1 2 23 858 879 857 879 0.97

9 17 4.7e-06 0.00086 20.9 0.3 1 23 885 907 885 907 0.99

10 17 0.00052 0.095 14.5 2.4 2 23 919 941 918 941 0.95

11 17 0.0062 1.1 11.1 2.6 1 23 947 970 947 970 0.96

12 17 0.011 2 10.3 3.0 2 23 991 1013 990 1013 0.95

13 17 8.8e-05 0.016 16.9 1.0 2 23 1020 1042 1019 1042 0.96

14 17 5.3e-05 0.0097 17.6 1.0 3 23 1051 1071 1049 1071 0.96

15 17 0.0011 0.2 13.4 2.3 1 23 1077 1100 1077 1100 0.96

16 17 0.31 55 5.8 3.2 2 23 1107 1128 1106 1128 0.96

17 17 0.0089 1.6 10.6 2.6 1 23 1134 1156 1134 1156 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	0.00039	0.071	14.9	0.1	2	23	660	681	659	681	0.96
2	17	0.3	54	5.8	0.8	1	19	687	705	687	706	0.93
3	17	6	1.1e+03	1.7	0.8	2	23	714	735	713	735	0.92
4	17	0.00012	0.021	16.5	1.3	3	23	744	765	743	765	0.98
5	17	0.0025	0.46	12.3	2.0	1	23	772	795	772	795	0.95
6	17	8.9e-05	0.016	16.9	0.7	1	23	801	824	801	824	0.94
7	17	1.6	2.9e+02	3.5	1.1	2	23	832	852	832	852	0.90
8	17	1.3e-07	2.4e-05	25.8	2.1	2	23	858	879	857	879	0.97
9	17	4.7e-06	0.00086	20.9	0.3	1	23	885	907	885	907	0.99
10	17	0.00052	0.095	14.5	2.4	2	23	919	941	918	941	0.95
11	17	0.0062	1.1	11.1	2.6	1	23	947	970	947	970	0.96
12	17	0.011	2	10.3	3.0	2	23	991	1013	990	1013	0.95
13	17	8.8e-05	0.016	16.9	1.0	2	23	1020	1042	1019	1042	0.96
14	17	5.3e-05	0.0097	17.6	1.0	3	23	1051	1071	1049	1071	0.96
15	17	0.0011	0.2	13.4	2.3	1	23	1077	1100	1077	1100	0.96
16	17	0.31	55	5.8	3.2	2	23	1107	1128	1106	1128	0.96
17	17	0.0089	1.6	10.6	2.6	1	23	1134	1156	1134	1156	0.98

Sequence Information

Coding Sequence: ATGCCAAACTCTGAAATTAATAAGTGTGATCATAATTATAGTGAATCAGAACCAGTTCAGAATGCTGTCAATTCTGACAATAACACTATCAACAAGGAATCCAAAATGGCACCTATTATGGGCCAAATTAAGGATATCGATGAGCTAAAGAAGATTGCGCCTCGTGTTCGACTACAAGATACTAAGAGCTTGAATGAATTAACAAGGATTTCATCCTTAAGTAATAGCAGTAGTAAATCACAGCAGAGCAAGTTGTCCATTTCTGAGAGAACTCagcaagaattaaaaaaatattgccgtACTTGTGCTGGTCTAAAATTACCCTTGGTGGACATATTTAGTGAAAAGGGTATAAAATTACGATTGAGCCAGCAAATCAAGCATTTGGAAGTGAATCCTTATGATAGTCTTTCTACGCAGATGTGCATGGACTGCATATGTGATCTTAAAATGAGTTACAAATTCTTCATGCAGATCAAAAAGGCTGAGGTAAAACTCAAATCCATTCATGTCAACTTGACAACTGATAATGTCGCAAAAAAAGCGGAATCGATTAATGAGTCTTTGATAACAAAGCAGACGAAGCAACCATCCTGTTTAGaaataaaacaagattgCCAATCACTTTCCACGATCCAACAAAATTCATCTTTATCTTCAACAAACCAAGAAAGTCAAATAATTACGAGAAATCAAGAAGATAACTCTGCTCCTAAAATTTGTGCCATCTTTTCATTGAATAAGGAGTTAAAGATGGAAGAAGAAGGAGCGCAAGTGGGTGGAGGAATCTTCGAGGAAATAGCAGAGGCAGAGGACGAAGAATCCATCGAGGAATTTGATCCTGAAGATCCAGCTTTTCAAGaagatgaagaagaagaattttCAAGGTCTCCAGCTgctgtttataaatatgacatgTTAGCAAAGTCTTATGTGCGAGTAGAAGAAGGTGAAGAAATAGTCTCCTTGAAATCTGAGATTACACAGACTTCagagggagaaggagaaaatCAAAAAGAAGGAATGAAACAACCAAATATTCTGAAAAGAAGATTGTTAATGTCAACAACAGCAGGAAAAAGTTGGGAAAAAGATGAAGTGCAGACCGAGATGGAGAATAGTCCAAAGGAGTGCAAGATGCAAAAATTAGACTTGAATAATCCATTGAGTGTGAACAATACTCCACATGAAGATGGAATTATGTACGTGACTGTGAAAGGATCCAAACCAAACGAGCTTTTATTAGTGAAGgttaaaaaaatggataaacCCATGGAATCAAAACGTACAACATCCTCCACTGATTTCTTCCAGCCTGTTGAACGTTTCCTCAAACGCTATGAACCCCTTGCATCGCGGGACTCCTCATCTCGACGTCCTGATGCCCGCGAGCAAATAATTGAGGAAcaaatagaagaatataaaaagaaacgtgAAAAAGTCCTCGGAAATCAATCAGCAAAGACCTTTATCGTGAACGAAATGCAAAAAGAAGTACAAGAAGAACAAATTTGCATCACAAGCcccaaaaaggaaaaagaaataatagttttaacaaaagaagaagatgaagagaaagagaaagaagaagaagtgaaagaaaatgaaaaagtcgACGAAAATCaggaaaagattaataataatacgaaggAACATGTTTTGAAGTTATCAAGAGAAAAGGTGAAATGGGAAGAGGCGAAACAGAAGAAAGAAAGTCTGCAGAATCAGGAATCCGAtgatactgaaaaaaatttggagaAGTTGATAAGAATCTtgggagagaaggagaagaatTTGCAggAATTCcaagaatatttgaaacagCGCAAGATCGTTCTTACTCGACTCAAAGACGAAGATGTAATCTCTCTCTACGAAGAATGTTTTTCCATCACATTGCAATTACCTCCTAAATCCTTGCCAGATCTTATAGACATTCAACCATCtgtcaatatattttccacAGAACGCGATCTAGAATGTGATTACTGTCCGGAAACTTTTTCTAATCGCGATATTCTCGAGGAACATCTCAAAGTTCACGACTATCGCATCCTTCACTATTGCGACGACTGTGAGGAAGAATTTCCAACTAATAAAGCAAAGAGAAATCACAATGTTAtttgtataagaaaattaatttgcaaatattgtgATCTACTTTTGGATTCCAGAGGAAAAAAACGTCAACATGAGCAAAAACATATTGATGCTCTTTATGGACAACTTTGCGAAGTTTGCGGAGAAAGATTCAAACATCAGGGAACTCTGGACCAGCACTTGAAAACACAACATACAattctagaaaaaatttatcagtGTCCAAAGTGtccaaaaaaatttgcttttaaaCAAAAACTAAGTTTTCATCTGAAATCGGTACACACAACTTTAAGAGCATATCTTTGTGAAGATTGTGGTGCAGATTTTAAGAATCCTGCAAGTTTAAGGCATCATAGAATCAGAAAACATCAACCGATCGGAAACAAGAGGGAATGTCCCGTTTGCAGGAAATTAGTGCCGTTTTATAGTTTATCCAAacatatgcacacacacaaagCTTATAGTATTCAGTGCCCACATTGTGAcaagatgtttaaaaatagttcGACCTTGAAGCAACACGTAAGGATTCACGAAGATCAAAGACAGTATCGTTGTGATACTTGCGGGGTTGGATTTAATCGAAGAGATGGTTTGAGGCTGCACATGAAAGTGCATGAAAAAACGGGTAGTAGGGGCTTGAAAGAATGTTCTTGCCAAGTTTGTGGAGAAAAATTCCCAAATCATTCGACTTTAGTGATTCATAGAAACAGAGTGCATAAGGATGGCAGGCAATATACATGTCATATTTGTAATAGATCAATGATTTCGACAAAATCACTCGAATGGCATATGTCACATATTCATAATGAGTCGATGCCAGgtGTTATCCGTGACGAGTCCGGTCCGCCTGAAAAAAAACGAGTTTCCTGCTACCACTGCAATAAAACCTTTAAAACGGAAATGATACTGCGTACACACATTAAAAACACTCATATGGAAAAGGATCCAATGAAATGCACTGACTGCGAGGAGACTTTTACATCCGAAGTACGTCTACGTCATCATATGATGGTTGCACACAATCGTCTCGAGGGCACGTTGGCGTGTCCCCACTGTCCGAAACGATTCGTGAACCAATTAAGGCTAAAGACTCACATGATTTCTCATTCTGAAGAAAGGCCGTATACTTGTGAGATTTGCGGTTTCAACTTGAAGACAAAGATCCAGCTGATTAAGCACCATCAAAATAGACACAGTGACGAGAGACCCTTGCAGTGCAGATATTGTCCCTGGCGGTGCAAACAAGTGAGTGCTCTCGTCTGCCATGAACGCACGCACACCAATGAACGTCCGTATTCGTGCAGTGTATGTCGGCAGCGATTCAAATATCTTGGAGATAAAAACAAGCATGAGCGACGTCACGAAAGCCTTGGCGGTTCGGGCTTTAAACGTATTGTACCTGGACGGAATATCAAACCAAAAGTGCGCGCCGATGATTCCTCTGGATCTGAACAGGGTTCAATCAAGGATTCTGTAAATCAGCAAAACATCCAGATTGTTGAACAGCAATATGGAGAGCAACAGGAAGAGCAATATGAACAGGAAGAAGAACAGATTGTTAAATTCGAACGGGAGCAGATTGTGAAGTTTGAAGATCCCGAGGAATACGAACAAGTTTATGAACAgTCAATCAGCGCGGAGCTACAAGAGGAAGCCAGGGGCGAAGCGCACAAAGTGAGAAGCGAGAGCATGAGCGCGGTAGTCGTCGCACAGTGGGCATAA
Protein Sequence: MPNSEINKCDHNYSESEPVQNAVNSDNNTINKESKMAPIMGQIKDIDELKKIAPRVRLQDTKSLNELTRISSLSNSSSKSQQSKLSISERTQQELKKYCRTCAGLKLPLVDIFSEKGIKLRLSQQIKHLEVNPYDSLSTQMCMDCICDLKMSYKFFMQIKKAEVKLKSIHVNLTTDNVAKKAESINESLITKQTKQPSCLEIKQDCQSLSTIQQNSSLSSTNQESQIITRNQEDNSAPKICAIFSLNKELKMEEEGAQVGGGIFEEIAEAEDEESIEEFDPEDPAFQEDEEEEFSRSPAAVYKYDMLAKSYVRVEEGEEIVSLKSEITQTSEGEGENQKEGMKQPNILKRRLLMSTTAGKSWEKDEVQTEMENSPKECKMQKLDLNNPLSVNNTPHEDGIMYVTVKGSKPNELLLVKVKKMDKPMESKRTTSSTDFFQPVERFLKRYEPLASRDSSSRRPDAREQIIEEQIEEYKKKREKVLGNQSAKTFIVNEMQKEVQEEQICITSPKKEKEIIVLTKEEDEEKEKEEEVKENEKVDENQEKINNNTKEHVLKLSREKVKWEEAKQKKESLQNQESDDTEKNLEKLIRILGEKEKNLQEFQEYLKQRKIVLTRLKDEDVISLYEECFSITLQLPPKSLPDLIDIQPSVNIFSTERDLECDYCPETFSNRDILEEHLKVHDYRILHYCDDCEEEFPTNKAKRNHNVICIRKLICKYCDLLLDSRGKKRQHEQKHIDALYGQLCEVCGERFKHQGTLDQHLKTQHTILEKIYQCPKCPKKFAFKQKLSFHLKSVHTTLRAYLCEDCGADFKNPASLRHHRIRKHQPIGNKRECPVCRKLVPFYSLSKHMHTHKAYSIQCPHCDKMFKNSSTLKQHVRIHEDQRQYRCDTCGVGFNRRDGLRLHMKVHEKTGSRGLKECSCQVCGEKFPNHSTLVIHRNRVHKDGRQYTCHICNRSMISTKSLEWHMSHIHNESMPGVIRDESGPPEKKRVSCYHCNKTFKTEMILRTHIKNTHMEKDPMKCTDCEETFTSEVRLRHHMMVAHNRLEGTLACPHCPKRFVNQLRLKTHMISHSEERPYTCEICGFNLKTKIQLIKHHQNRHSDERPLQCRYCPWRCKQVSALVCHERTHTNERPYSCSVCRQRFKYLGDKNKHERRHESLGGSGFKRIVPGRNIKPKVRADDSSGSEQGSIKDSVNQQNIQIVEQQYGEQQEEQYEQEEEQIVKFEREQIVKFEDPEEYEQVYEQSISAELQEEARGEAHKVRSESMSAVVVAQWA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01255001;
90% Identity: -
80% Identity: -