Basic Information

Insect: Lasius platythorax
Gene Symbol: -
Assembly: GCA_963971435.1
Location: OZ020547.1:14110682-14121552[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 2e-05 0.004 19.0 0.1 2 23 662 683 661 683 0.97

2 17 0.34 68 5.7 0.8 1 19 689 707 689 708 0.93

3 17 6.9 1.4e+03 1.6 0.8 2 23 716 737 715 737 0.92

4 17 0.00014 0.027 16.4 1.3 3 23 746 767 745 767 0.98

5 17 0.013 2.5 10.2 2.8 1 23 774 797 774 797 0.95

6 17 0.0001 0.02 16.8 0.7 1 23 803 826 803 826 0.94

7 17 1.9 3.7e+02 3.4 1.1 2 23 834 854 834 854 0.90

8 17 1.5e-07 3e-05 25.7 2.1 2 23 860 881 859 881 0.97

9 17 5.5e-06 0.0011 20.8 0.3 1 23 887 909 887 909 0.99

10 17 0.00061 0.12 14.4 2.4 2 23 921 943 920 943 0.95

11 17 0.0086 1.7 10.8 2.5 1 23 949 972 949 972 0.96

12 17 0.013 2.6 10.2 3.0 2 23 993 1015 992 1015 0.95

13 17 2.9e-05 0.0058 18.5 1.0 2 23 1022 1044 1021 1044 0.96

14 17 6.2e-05 0.012 17.5 1.0 3 23 1053 1073 1051 1073 0.96

15 17 0.0025 0.51 12.4 2.6 1 23 1079 1102 1079 1102 0.96

16 17 0.35 71 5.7 3.2 2 23 1109 1130 1108 1130 0.96

17 17 0.01 2.1 10.5 2.6 1 23 1136 1158 1136 1158 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	2e-05	0.004	19.0	0.1	2	23	662	683	661	683	0.97
2	17	0.34	68	5.7	0.8	1	19	689	707	689	708	0.93
3	17	6.9	1.4e+03	1.6	0.8	2	23	716	737	715	737	0.92
4	17	0.00014	0.027	16.4	1.3	3	23	746	767	745	767	0.98
5	17	0.013	2.5	10.2	2.8	1	23	774	797	774	797	0.95
6	17	0.0001	0.02	16.8	0.7	1	23	803	826	803	826	0.94
7	17	1.9	3.7e+02	3.4	1.1	2	23	834	854	834	854	0.90
8	17	1.5e-07	3e-05	25.7	2.1	2	23	860	881	859	881	0.97
9	17	5.5e-06	0.0011	20.8	0.3	1	23	887	909	887	909	0.99
10	17	0.00061	0.12	14.4	2.4	2	23	921	943	920	943	0.95
11	17	0.0086	1.7	10.8	2.5	1	23	949	972	949	972	0.96
12	17	0.013	2.6	10.2	3.0	2	23	993	1015	992	1015	0.95
13	17	2.9e-05	0.0058	18.5	1.0	2	23	1022	1044	1021	1044	0.96
14	17	6.2e-05	0.012	17.5	1.0	3	23	1053	1073	1051	1073	0.96
15	17	0.0025	0.51	12.4	2.6	1	23	1079	1102	1079	1102	0.96
16	17	0.35	71	5.7	3.2	2	23	1109	1130	1108	1130	0.96
17	17	0.01	2.1	10.5	2.6	1	23	1136	1158	1136	1158	0.98

Sequence Information

Coding Sequence: ATGCCAAACTCTGAAATCAATAAGCGTGACCATAATTATAGTGAATCGGAACCACCTCAGAATGTCAACAATTCCGACAGCATTATCAGCAGGGAATCCAAAATGGCGCCTATTGTTGGCCAGATTAAAGATATCGATGAGCTGAAGAAGATCGCACCACGCGTCCGACTACAAGATGCTAAGAGCTTGAATGAATTGACAAGGATCTCGTCCTTGAGCAATAGTAAATCGCAGCAAAGCAAGTTGTCCATTTCTGAGAGGACTCagcaagaattaaaaaaatattgtcgtACTTGTGCTGGTCTAAAATTGCCGTTGGTGGACATTTTCAGCGAGAAGGGTGTCAAATTGCGACTGAGTCAGCAAATTAAGCATCTGGAAGTGAATCCTTACGATAGCCTTTCTACACAGATGTGCATGGATTGCATCTGTGATCTTAAGATGAGTTACAAATTCTTCATGCAGATCAAAAAGGCCGAGATGAAACTCAAATCCATTCACGTCAACTTGACAACTGATAACGTTGCAAAGAAAGCGGAATCGATTGATGAGTCTTTGATAACAAAACAGGAAGAACAATCATCCTGCATAGaaacaaaGCAAGAGCGCGAATCACTTTCCACAATTCAACAAAATCCATCTTTGTCATTAATAAAGCAAGAAAGTCAAATAATTATGAGAAATCAAGAAGACAACTCTGCTCCCAAAATTTGTGCCATCTTTTCGTTGAATAATGAATCGAAgatggaagaggaagaggaaggggCGAGGGTGGGCGGAGGAATCTTCGAGGAGATAGCAGAGGGAGAGGACGAAGAATCTATTGAGGAATTTGATCCCGAAGACCCGGCTTTCcatgaagatgaagaagaagaagaattttCAAGGTCTCCAGCTGCTGTTTACAAGTATGACATGTTGGCAAAGTCTTATGTGAGAGTGGAAGGAGGTGAGGAAGTAGTTTCCATGAAATCTGGGATCACTCAGACTTCAGAGGGTGAAGGAGAAAATCAAAGAGAGGGAATGAGACAACCAAATATTCTGAAAAGAAGATTATTGATGTCAACAACAACGACGAAGAGTGGGGAAAAGGATGGGATGCAGAATGAAGTGGAAAGTACTCTGAAGGAGTGCAAGGTGCAAAAATTAGACTTGAATAATCCACTGAGTGTGAACAATGCTCCACATGAGGATGGAATTATGTACGTAACCGTGAAGGGGTCCAAACCAAACGAGATTTTATTGGTGAAGGTCAAGAAAATGGACAAACCCATGGAATCAAAACGCATAGTATCCTCCACCGATCTCAAGCCCGTTGAACGTTTCCTCAAACGCTATGAGACCTTGGCATCGCGAGACTCCTCATCTCGACGTCCTGATGCCCGCGAGCAAATAATTGAGGAACAAatcgaagaatataaaaagaaacgcgAGAAAGTCCTCGGAAATCAATCAGCAAAGACCTGTACCGTAAACGAGAcgcaaaaagaaatacaagaagaaaatatttgggCCACATTAAGTCCCAAAAAGgcggaaaaagaaatattggtTTCAACAAAAGAAgatgaagagaaagagaaggaagaggaaacGGAGGAAGGCGAAAAAGTCAATGAAAGTCAAGAGAAAGTTAATGATAGTACGAaggaatatatttcaaaattatcgaGAGAAAAGTTGAAATGGGAAGAGGCAAAGCAGAAGAAAGAAAGTCTGCAGAACCAGGAATCAGACGAGACATATATCGAAGGGAATTTGGAAAAGTTGATGAGAATCTtgggagagaaggagaagaattTGCAGGAATTCCAGGAATACTTGAAGCAGCGCAAGATCGTTCTTACTCGTCTCAAAGACGAGGATGTAATCTCTCTCTATGAAGATCGTTTTTCCATCACGTTGAAATTACCTCCTAAACCCCTGCCGGATCTTATAGACATTCAACCATCTGTTGATTTGCTGCCCATAGAGCGTTATCTGGAATGCGATTACTGCCCGGAGACTTTTTCCAATCGTGATGTCCTCGAAGAACACCTGAAAACTCACGACTACCGCATTCTTCACTATTGCGACGACTGTGAAGAAGAATTTCCAACTAATAAAGCAAAGAGAAATCATAATGTCATTTGTGTAAGAAagttaatttgcaaatattgcgATCTACTTTTGGATTCCAGAGGGAAAAAACGTCAACATGAGCAGAAACATATTGATGCCCTTTATGGACAACTTTGCGAAGTTTGCGGAGAAAGATTCAAACACCAGGGAACCCTGGATCAGCACTTGAAAACACAACATACgattttagagaaaatttatCAGTGTTCAAAGTgtccaaaaaaatttgctttcaAGCAAAAACTAAGTTTTCATCTAAAATCAGTACATACAACTTTAAGAGCATATCTTTGCGAAGATTGCGGTGCAGATTTTAAGAATCCTGCGAGTTTAAGGCATCACAGAATTAGAAAACATCAACCTGTCGGAAACAAGAGGGAATGTCCCGTTTGCAGGAAATTAGTGCCGTTTTATAGTTTATCCAAACACATGCACACGCACAAAGCTTATAGTATTCAGTGTCCGCATTGTGACaagatgtttaaaaatagttcGACCTTGAAGCAACACGTGAGGATTCATGAAGATCAAAGACAATATCGTTGTGACACTTGCGGGGTTGGGTTTAATCGAAGGGATGGTTTGAGACTGCACATGAAGGTGCACGAAAAAACGGGTAGTAGGGGCTTAAAAGAGTGTTCTTGCCAAGTTTGTGGAGAAAAATTCCCGAATCATTCGACCTTGGTAATTCATAGGAATAGAGTGCACAAGGATGGCAGGCAATATACATGTCACATTTGTAATAGATCGATGATTTCGACAAGATCGCTCGAATGGCATATGTCACATATTCATAATGAGTCGATGCCAGGCGTTACACGCGACGAGTCCGGTCCGCCTGAAAAAAAACGGGTTTCCTGTTATCACTGCAATAAAACCTTCAAGACGGAGATGATACTGCGTACACACATCAAAAACACTCATATGGCAAAAGATCCAATGAAGTGCACTGACTGCGACGAGACTTTCACATCCGAAGTACGTCTACGTCATCATATGATGGTCGCACACAACCGTCTCGAGGGCACTTTGGCGTGTCCTCACTGTCCGAAACGATTCGTGAATCAATTAAGGCTAAAGACTCACATGATTTCTCATTCTGAGGATAGGCCGTACACTTGCGAGATTTGCGGTTTCAACTTGAAGACGAAGATCCAGCTGCTTAAGCATCATCAAAACCGACACAGTGACGAAAGACCTTTACAGTGCAGATATTGTCCCTGGCGGTGCAAGCAGGTGAGTGCTCTCGTCTGCCATGAGCGCACGCACACCAATGAGCGTCCGTATTCGTGCAGCGTGTGTCGGCAGCGCTTCAAATATCTCGGCGATAAAAACAAGCATGAGCGACGTCACGAGAGCCTTGGTGGTTCAGGCTTCAAACGCATTGTACCTGGAAGGAACATCAAGCCAAAAGTGCGCGCCGACGATTCCTCTGGATCCGAGCAGGAGCAAGACTCAATCAAGGATTCTGTAAATCAGCAGATTGAAGAGCAATATGGAGAGCAACAGGGAGAGCAATATGAACAAGAAGAACAGATTGTCAAATTCGAACAGGTGAAATTTGAGGATCAGGAGGAGTACGAACAAGTATATGAGCAGGAGTATGAAGAAACTTCGAGAGAGGCATCGGAAGCTACAGAAGTGATCATGAACATAGAGGATTCCAATGTGTACACGGAGGAAGTTACGGCCGACAATATGGAGCCCAGTTCTGAAATTATGACAGACGAAATTATGACGAATGATATTCTGCAATCCGGTACCGCTGTAGTGCATCTACAACGTCAGGACGATACGGGGAAGATTCAAGTGATACCCGTGATGCTATCCTTGCCCGATCTGTCCGACACAAATGCCGAAGTCAATCTCGCAACCGCGTCTatcatgtataataattag
Protein Sequence: MPNSEINKRDHNYSESEPPQNVNNSDSIISRESKMAPIVGQIKDIDELKKIAPRVRLQDAKSLNELTRISSLSNSKSQQSKLSISERTQQELKKYCRTCAGLKLPLVDIFSEKGVKLRLSQQIKHLEVNPYDSLSTQMCMDCICDLKMSYKFFMQIKKAEMKLKSIHVNLTTDNVAKKAESIDESLITKQEEQSSCIETKQERESLSTIQQNPSLSLIKQESQIIMRNQEDNSAPKICAIFSLNNESKMEEEEEGARVGGGIFEEIAEGEDEESIEEFDPEDPAFHEDEEEEEFSRSPAAVYKYDMLAKSYVRVEGGEEVVSMKSGITQTSEGEGENQREGMRQPNILKRRLLMSTTTTKSGEKDGMQNEVESTLKECKVQKLDLNNPLSVNNAPHEDGIMYVTVKGSKPNEILLVKVKKMDKPMESKRIVSSTDLKPVERFLKRYETLASRDSSSRRPDAREQIIEEQIEEYKKKREKVLGNQSAKTCTVNETQKEIQEENIWATLSPKKAEKEILVSTKEDEEKEKEEETEEGEKVNESQEKVNDSTKEYISKLSREKLKWEEAKQKKESLQNQESDETYIEGNLEKLMRILGEKEKNLQEFQEYLKQRKIVLTRLKDEDVISLYEDRFSITLKLPPKPLPDLIDIQPSVDLLPIERYLECDYCPETFSNRDVLEEHLKTHDYRILHYCDDCEEEFPTNKAKRNHNVICVRKLICKYCDLLLDSRGKKRQHEQKHIDALYGQLCEVCGERFKHQGTLDQHLKTQHTILEKIYQCSKCPKKFAFKQKLSFHLKSVHTTLRAYLCEDCGADFKNPASLRHHRIRKHQPVGNKRECPVCRKLVPFYSLSKHMHTHKAYSIQCPHCDKMFKNSSTLKQHVRIHEDQRQYRCDTCGVGFNRRDGLRLHMKVHEKTGSRGLKECSCQVCGEKFPNHSTLVIHRNRVHKDGRQYTCHICNRSMISTRSLEWHMSHIHNESMPGVTRDESGPPEKKRVSCYHCNKTFKTEMILRTHIKNTHMAKDPMKCTDCDETFTSEVRLRHHMMVAHNRLEGTLACPHCPKRFVNQLRLKTHMISHSEDRPYTCEICGFNLKTKIQLLKHHQNRHSDERPLQCRYCPWRCKQVSALVCHERTHTNERPYSCSVCRQRFKYLGDKNKHERRHESLGGSGFKRIVPGRNIKPKVRADDSSGSEQEQDSIKDSVNQQIEEQYGEQQGEQYEQEEQIVKFEQVKFEDQEEYEQVYEQEYEETSREASEATEVIMNIEDSNVYTEEVTADNMEPSSEIMTDEIMTNDILQSGTAVVHLQRQDDTGKIQVIPVMLSLPDLSDTNAEVNLATASIMYNN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01255001;
90% Identity: iTF_00868284;
80% Identity: -