Pmac039781.1
Basic Information
- Insect
- Portevinia maculata
- Gene Symbol
- hang
- Assembly
- GCA_949715645.1
- Location
- OX454526.1:95870783-95876722[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 17 0.041 17 8.6 1.3 3 23 117 138 116 138 0.93 2 17 0.016 6.7 9.9 2.7 1 23 299 322 299 322 0.91 3 17 0.0015 0.63 13.1 1.7 2 23 431 453 430 453 0.95 4 17 0.017 7.2 9.8 0.1 1 23 461 484 461 484 0.95 5 17 2.8e-05 0.012 18.5 0.1 2 23 578 599 577 599 0.97 6 17 1.8e-05 0.0077 19.1 2.5 2 23 654 676 653 676 0.96 7 17 0.0042 1.8 11.7 0.3 2 23 685 707 684 707 0.95 8 17 0.00078 0.32 14.0 0.2 1 23 720 743 720 743 0.97 9 17 0.00031 0.13 15.2 1.0 1 23 771 793 771 793 0.99 10 17 0.0013 0.56 13.3 0.9 1 23 801 824 801 824 0.96 11 17 0.0023 0.96 12.5 0.5 2 21 832 851 831 852 0.93 12 17 0.00019 0.081 15.9 0.4 3 23 907 927 906 927 0.98 13 17 6e-05 0.025 17.5 0.2 1 23 962 984 962 984 0.98 14 17 6.3e-05 0.026 17.4 0.2 2 23 1009 1031 1008 1031 0.93 15 17 0.18 76 6.5 0.3 2 19 1051 1068 1051 1070 0.94 16 17 0.0095 4 10.6 0.3 3 23 1086 1106 1086 1106 0.97 17 17 0.0028 1.2 12.3 1.9 1 23 1245 1267 1245 1267 0.96
Sequence Information
- Coding Sequence
- ATGGAGGAATGGGATAAGTTTGGAGAAAACTGGGGTACATTGGATGTACCTAAAGAGTTAATATTGGTATGGTTTGAAGTTGAAATCTTGTTATTAGGTTCACTTGTGCTAGCGTCAGGGATTTTAGAAAGCCTAGCTGGCGGCTTGGGTGGGTTTGGGAGGGCACCCTCAGGAACTTTGTCAATTGATGAATTGTTATTGGCCGGAATTGGTTGGGGGTCGGTAGTCTTGGTAACTGAGGCATATGACATCGCTGACTACACTTTCGATGGAGACAAGCTGTCACATCCAACGATAGACAAATCTCTCGAAATTACCCCGACAATCAATGAAGTAAAAGAAGCATCATGCCGAGCTTGCAACTTAAAATTTTCCACAAGGGCAAACGCACGCCGCCATGAGCGCAACCTCCATCCACAGCTGTTTACAAGTATTGCTGCAGCCCAGTCAAAGGGACTAAATATAGTTCCACCCATGCAGGTAATTCGACCGGCTATCAAACCCGAGCAGCTGGGACTTTTTGATTATGATCAACCAGAGAAGTATATACAACTTTTAACtgaagaaaaaataatgttCATGCAGCGTCATGACGATTTTCTTCAACAATACCAGAATATGACATGCAATTGCTGCTTGCGCACTCATGCCACGTACAAAAACTTTATGGCTCACATGCGGAAGAAGTATCACTCATTGCCGCGCAATCTGTGTTTCAAGTGTCTCAAGCAAAATGATTCGAAAGCACTGTTCATATCGCATTTGAAGAAACGTAACTGTATTAATCTGTACAAGGTCTATCATAGCTTGATCGATGCTGGTGTATTAAAGAAGGACGTGGTCATCTGTTCGGCTGATAAGCTGGGTGCCAAAGAATTGCTGGTTAATAAAATTTACGAATGCAAGATTTGCTCTAAACATTTTCGGTTGAAGTTGGAATTCCGAAGTCACGTTTATGAAGAACATGCAGATTATCAGAAGAAGGATGTCTCACCGGGACATTGTGGATTCTGTGGGCTGGAAATCGAAGACCCCTTCGAAAGAAAACGTCACTACAATAACATGGACTGCATTGTTATACTGCGTTGCATCACATGCGAAGAGAAGTTTGATAATCACCAGAAATTCTTAGATCATGTATACTCTAAGCATTTGGCAAACAACAACGAAGCACAGAAGGGCAATTTGATGAAGGAGCTAGCGGCAACCGCAACTACGTCTACAGACAGCTCGCCGTCAAAAAAGTCCGAAACCCCGTCAAAACCGCAGTTCTTTTCCCGTTTACCTCAGAGCTGCAATATTTGCGGCCAGCACTACAACAATTACAACAATGTTCTACGACATATGGAGTCCAAGCACCCGGATCAACTGCCACAGACGTACAAATGTACCCGATGTCTCGTAGGCTATCCACGTTTAATGAACCTCCGCGAACACATGATTGAGGTGCACGGTATGAAGGTGGACAAAGTACGCAACAACAGCTTTGAGTATATTGTGGACTCGCCCACTTTGCAGGGAAGTGCCCCTCGGCCAGGTGACAAAATGACCGCCGATGCGTACACTGGAAGGTATGACTACGTGATGAAAGACTTAATGTCTATAACCAACGGTGGCGCAGAGGGCGCAAATGAAATCGATGATGATGGCAATCAGTCAGATTCGCCGACTCCAAAGAAAATTAAGCTGGACGGCTGTACGATGGTGGCGGTTGGAACAGCTAGCTTGAAAGAATGTCCGATCTGCAGTGCAGTCTTCAACAACAACATCGGACTCTCCAATCACATGCGTACTCATACTGCGGTTGAGAGTGCTGTTGGCAGTGCTACTGCCACTGTAGCCGCTGGTGGGGAAGAAAATATACCTGATGAAGATGAGGAGGCTGCAGAAAAAAAACCGATTGACCCACTTTTCAAGAGAAGTCTAGAGTTGGCGGCCGATCGGCGGTTCCGCCGCATGCGATGCCGCATTTGCCAGAAACGCTTTTCATCGAAAAAGAGCTATCGCCGCCACATGTTGGTTGATCATCAAATCCGTAATGTGCAGTTTATCAAATGTAAGCTCTGCAACGCTGAATTTGCCTACGAGAAAGGCCTAAAAGTACACATGTTCAAAATACACAACACTCTACTAAAAGATGAAATGATCGTGAAGCAATACGAGTGCGATATCTGTTCTATTGTATACCGGACCGAGGAACAGCTGCTGCTGCATAAGAAGTCGGTTCATGGCAATGAAACTGCCCAAGCTGACGATGATCTGCTCCCATCAATGGAGCAAACAATGGAGTCATCACCGCCGCTgtactggtatcagtgtcgctATTGCCCATCCAACTTCAACACAAACAAGAAGCTTGCAATTCATATAAACTCCCACTACGAATTCGACTCAAATGACTACTCCTGCAAGGATTGCGGCAATGTGTACAGCGGACGTAAAAGTCTTTGGGTACATCGCTACAAAAAACACCCCCCGGTGGCTGATCCTTCGGAGTGTTCCCTATGCAAAAAAACCTTCTTCGATAAGCAAATGCTAGAGAACCACGTCCAGTCATGTGTCAAGAAATCGAAAGGTGGTGGTGCAACTGAATCTGAAGTCTCTTCTACTTTCTTTCAGCATAAAACCGGAGACGATGACGATATTCATGATCAGCAGCAGTCGGAGCAAACAGCAGAAAGGTCTGCgaatttaaaaatcaaattacCTGAAGTCGCGTGCACGATTTGTGCACAGAAATTCACTGATCAGGAGCTCTTTACCAAACACATTCAGATGCACGAGATGGAGTTGTACACTGACAATCCGCTGGCAGCTATGTTTGACACCGGACCAGCTGACCCGAATCAATTCTACTTAGATCGTGTCAATGATAATGGGGAGTATGTGTGCGATATCTGCACAAAGGCTTTCGCCCAAATGACAGCGCTGAAGGTCCACCGCAAGTGGCATTTCCGAGGTGATAGCAAACAGACTCCAGTCGATGTAAACGTGTCAAAGGCGATGAAACGCAAACGTGAACTTAAATGCGATTACTGTCCGTCGACGTTCATAAGCTCTAACAATCTACGCCGCCATATAGCTGAGCTGCACAAGTCCGAAATATCAAACTGGCCCGAACCACCAAAAATTGAACCCGAAAAGTACCGCCAATGCAGCAGATGCGACCTGAAGTTCGACACGAAAAAGGACTGGATTGAGCACAAGGTAAATGAAGCAAAGATTGCCAAACCGTTTGGTCCATTCCAGTGGGGCTGTGAGATCTGTGGCGTGTACTTATCGCGTCGGGAGAAGCTCATACATCACATGATAGCACACATTAAAGAATCCAACGGCCAGGTTAGTCAGGTCGAGGGCGATAATTATCCGGGCGAGAGTAACTCACAAGATTCGGAGTCCTCAAGTCGTCAAGAGGCATCTGAACAACAGCGAGCTGATGAAGAAGAcgaagaggaggaagaagaggaagacgacgacgacgaagaggaggaggaagaatTTGAAGGTGATGAAGAAGAAGCTGACGAAACAGTCAACTCAGTAAACCACGATGACAACGCCAACGACGGCCAGAATGACGACGAACAGCAATCACAACTTAGACAACGACTGCAGCGTGAATCAAACGATGACAGCAATGACTCAAGCGAACAAAGTTCCGATTCAGACGATTCATCGTCTGAAGAGGAGGAACAAGAGGCTCCCCAATCAAGTGAAGAGTTCAAAAAACGACATTCGTGCGATTTATGTCAGGTTTTCTTTGACACGTCGACGGAGCTGCAAAAGCATGTCACTAGTCATTTTCTCAACGGACCCGGTTCAGTCACATTGACCACAATCACAAAGCACAAGCGATCAACAAAATCAAATCacgatgatgaagatgatgatgatggtgatgacgAGGAGGATATAACCGAGGCGCACGTTTTGAATTCGTAA
- Protein Sequence
- MEEWDKFGENWGTLDVPKELILVWFEVEILLLGSLVLASGILESLAGGLGGFGRAPSGTLSIDELLLAGIGWGSVVLVTEAYDIADYTFDGDKLSHPTIDKSLEITPTINEVKEASCRACNLKFSTRANARRHERNLHPQLFTSIAAAQSKGLNIVPPMQVIRPAIKPEQLGLFDYDQPEKYIQLLTEEKIMFMQRHDDFLQQYQNMTCNCCLRTHATYKNFMAHMRKKYHSLPRNLCFKCLKQNDSKALFISHLKKRNCINLYKVYHSLIDAGVLKKDVVICSADKLGAKELLVNKIYECKICSKHFRLKLEFRSHVYEEHADYQKKDVSPGHCGFCGLEIEDPFERKRHYNNMDCIVILRCITCEEKFDNHQKFLDHVYSKHLANNNEAQKGNLMKELAATATTSTDSSPSKKSETPSKPQFFSRLPQSCNICGQHYNNYNNVLRHMESKHPDQLPQTYKCTRCLVGYPRLMNLREHMIEVHGMKVDKVRNNSFEYIVDSPTLQGSAPRPGDKMTADAYTGRYDYVMKDLMSITNGGAEGANEIDDDGNQSDSPTPKKIKLDGCTMVAVGTASLKECPICSAVFNNNIGLSNHMRTHTAVESAVGSATATVAAGGEENIPDEDEEAAEKKPIDPLFKRSLELAADRRFRRMRCRICQKRFSSKKSYRRHMLVDHQIRNVQFIKCKLCNAEFAYEKGLKVHMFKIHNTLLKDEMIVKQYECDICSIVYRTEEQLLLHKKSVHGNETAQADDDLLPSMEQTMESSPPLYWYQCRYCPSNFNTNKKLAIHINSHYEFDSNDYSCKDCGNVYSGRKSLWVHRYKKHPPVADPSECSLCKKTFFDKQMLENHVQSCVKKSKGGGATESEVSSTFFQHKTGDDDDIHDQQQSEQTAERSANLKIKLPEVACTICAQKFTDQELFTKHIQMHEMELYTDNPLAAMFDTGPADPNQFYLDRVNDNGEYVCDICTKAFAQMTALKVHRKWHFRGDSKQTPVDVNVSKAMKRKRELKCDYCPSTFISSNNLRRHIAELHKSEISNWPEPPKIEPEKYRQCSRCDLKFDTKKDWIEHKVNEAKIAKPFGPFQWGCEICGVYLSRREKLIHHMIAHIKESNGQVSQVEGDNYPGESNSQDSESSSRQEASEQQRADEEDEEEEEEEDDDDEEEEEEFEGDEEEADETVNSVNHDDNANDGQNDDEQQSQLRQRLQRESNDDSNDSSEQSSDSDDSSSEEEEQEAPQSSEEFKKRHSCDLCQVFFDTSTELQKHVTSHFLNGPGSVTLTTITKHKRSTKSNHDDEDDDDGDDEEDITEAHVLNS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01301094; iTF_01300246; iTF_00241671; iTF_01541615; iTF_00310461; iTF_00671719; iTF_00672356; iTF_00671095; iTF_00241012; iTF_01542396; iTF_01116607; iTF_00389818;
- 90% Identity
- -
- 80% Identity
- -