Eper011818.1
Basic Information
- Insect
- Eristalis pertinax
- Gene Symbol
- hang
- Assembly
- GCA_907269125.1
- Location
- OU026149.1:11073495-11084277[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 17 0.034 2.7 8.4 1.3 3 23 269 290 268 290 0.93 2 17 0.014 1.1 9.7 2.7 1 23 460 483 460 483 0.91 3 17 0.0013 0.1 12.9 1.7 2 23 590 612 589 612 0.95 4 17 0.0094 0.76 10.2 0.1 1 23 620 643 620 643 0.95 5 17 2.4e-05 0.0019 18.4 0.1 2 23 740 761 739 761 0.97 6 17 1.6e-05 0.0013 18.9 2.5 2 23 805 827 804 827 0.96 7 17 0.0035 0.28 11.5 0.3 2 23 836 858 835 858 0.95 8 17 0.00029 0.023 15.0 0.2 1 23 871 894 871 894 0.98 9 17 0.00026 0.021 15.1 1.0 1 23 922 944 922 944 0.99 10 17 0.0011 0.091 13.1 0.9 1 23 952 975 952 975 0.96 11 17 0.028 2.3 8.7 0.3 2 21 983 1002 982 1003 0.92 12 17 0.00016 0.013 15.7 0.4 3 23 1061 1081 1060 1081 0.98 13 17 2e-05 0.0016 18.6 0.1 1 23 1116 1138 1116 1138 0.98 14 17 5.3e-05 0.0043 17.3 0.2 2 23 1163 1185 1162 1185 0.93 15 17 0.036 2.9 8.3 0.4 2 19 1205 1222 1204 1224 0.93 16 17 0.0029 0.24 11.8 0.7 3 23 1240 1260 1240 1260 0.98 17 17 0.0012 0.095 13.0 0.2 1 23 1392 1414 1392 1414 0.97
Sequence Information
- Coding Sequence
- ATGACAGAAGAATCAATATTACGTGCACGTCAGAATTGCTGTCGCTTATGCTTGGCTCCGGACAGTGAATGTATTTCGATTTTTAACAGCTACGCGGCTGATAAGGAGCCCCTAGCTACCAAAATTCTATCTTGTGTCAATATTAAGGTGTCGCCGATTGATAGGCTTTCGTTGCGAATATGTCACGCTTGCATCAGTTACTTGAATTCATGGCAGAGTTTCAAGAATCGATGTGTTGCCTCACAGAACAAGCAACGCAGTTGGCTGGATATATcgaagaaaatggagaaaaaacaAATTGGCTCAGCGATTCCACTCTCTGTTGGGGCTCCAGGGGGCGTatgcgacggcggcggcggtggaacAGGAAATGTTACGGGTGCGGGTGCGGGTGCGAGAGGAGTCCCGCATGAAGACGGAGAGGAGGACCAAGAAAACAGCCCACTTGCCACATCGATTTTGGAAGGCATTTCATCGCTCAAGAAGCGGCGGTCTTTGACGGTTTACCCAATTCCAGTTCACATAAAGGACGAGCCAGTCGATGAAGAAGAGTATGATCCCAAGCATGACGAGTCTGATATCGATCCAACGCTCTTTTTGGAACGTACCGAAGAGGAGGGGTCCGATAATATGTCACAAAAGGAACAGCACTTGGCGTCGTTAGGTTTAAAACAAGCCTCAAATTCGGTTAATCCTTTAAATTACCTGGCTGATTACAGTTTCGACGAAGACAAAGCAAACCGGCCATCCGTTGACAAATCGCTGGAAATATCTGCCACGACAACCGAAGTAAAAGAGGCATCATGCAGGGCTTGTAATTTAAAGTTTTCCACAAGAGCAAATGCTCGTCGGCACGAGCGCAACCTTCATCCACATCTTTTCTCCGGCATGGGACTAGGCAACCCCGGTTCCAAAGGACTCAGTGTAGTCGCATCAATGCAACAAGGAATCAAAACTACTCAGGCAATTCGATCAGTGATGAAACCAGATCAACTTGTACTCTTTGACTATGATCAACCCGAAAAGTATCAGCAGCTTCTGACGGATGAGAAGATATTATTTATGCAGCGACACGAAGACTTCCTGCAGCAGTATCAGAATATGACGTGCAACTGTTGCCTACGCACGCATGCAACTTACAAAAATTTCATGGCACACATGCGAAAGAAGTATCATTCGCTGCCGAGGAATTTGTGCTTCAAATGCTTGAAGCAAAACGATTCGAAAGCCCTTTTCATATCGCATCTTAAGAAGCGAAACTGTATTAATTTGTACAAGGTGTACAACAGCCTCATTGATGCCGGTGTTTTAAAGAAAGACTCCTTAGGGTGGTCCCCCGATAAGCTGCGTGCCAAAGAGTTGCTAGTGAATAAGATCTACGAATGTAAGATCTGCTCGAAGCACTTCCGATTAAAGCTCGAGTTTCGAAGCCATGTGTATGAGGAGCACGCTGACTATCAGAAGAAGGACGTCTCACCGGGTCACTGTGGATTCTGCGGCTTGGAAATCGAGGATCCCTTCGAGCGTAAGCGCCACTACAACAACATGGATTGCATTGTTATATTGAGATGCATCACCTGCGAGGAAAAGTTCGATAATCATCAGAAATTCCTTGATCATGTGTATTCCAAGCATTTAGCAAACAACAACGAAGTGCAAAAGAGCAATCTGATGAAGGAGCTCTCTTCAACGACGTCTACAGAGAGTTCGCCATCAAAGAAATCCGAAACTCCTCAGAAACCACAGTTCTTTTCCCGTCTACCTCAGAGCTGCAACATTTGCGGCCAGCATTATAACAACTACAACAACGTCTTGCGGCACATGGAGTCGAAGCATCCGGATCAGTTGCCGCAAACATACAAATGCACTCTGTGCTTAGTGGGTTATCCGCGTCTGATGAACCTCAGGGAGCACATGATCGAAGTGCACGGCATGAAAGTGGACAAAGTTCGAAACAACAGTTTTGACTATATTGTCGACTCGCCTACAGTTCAAGGAACTCTGCCACGCGGACCAGACAAAATGATCGCTGACGCGTACACAGGGCGTTATGATTACGTCATGAAGGATTTGATGTCGATAACGAATGGCGGTACATCGCTGAACGAGAACACAAATGAAAATGACGACGATGGCAACCTCGGCGACATGCCTGcagcaaagaaaataaaacttgAGTCTGGGGCAGTTGTGGCAATAGGTACCGCCAATTTGAAAGAATGCCCGATATGCAGTGCCGTCTTCAACAACAACATCGGCCTTTCCAATCACATGCGCACTCATACAACTGGAGAAGTGGGAGCGGAGGATGAGATACCTGAAGAAGACGATGAAGTGACTGAGAAAAAGTCAATCGATCCATTGTTCAAACGAAGCCTAGAGCTAGCCGCAGACCGGCGATTCCGTCGTATGCGTTGCCGCATTTGCCAGAAGCGTTTTTCCTCAAAGAAGAGCTACCGCCGTCACATGCTGATTGATCATCAAATCCGCAATGTGCAGTTCATCAAGTGTAAACTTTGCAATGCCGAGTTCGCCTACGAGAAAGGTCTCAAAGTGCACATGTTCAAGATACACAACACACTGCTGAAAGACGAGATGATTGTGAAGCAGTATGAGTGTGACAtatgctcgattgtgtatcgaACAGAGGAACAGTTATTGCTTCATAAGAAGACTGTTCATGGCAACGAGAGCGCCCAAGCGGACGACGAACTGCCACAAATGATGGATCAGAGCATGGAATCGACGGCTCCACTGTACTGGTATCAGTGCCGCTACTGTCCGTCAAAtttcaacacaaacaaaaagcTGGCCATTCACATTAACTCGCATTACGAATTCGATTCAAATGATTACTCTTGCAAAGACTGCGGAAACGTGTACAGTGGACGTAAGAGTCTGTGGGTGCATCGCTACAAGAAACATCCGCCCGTTGCCGATCCGTCCGAGTGTTTACAATGCAAGAAGATATTCTTTGACAAgcaaatgctggaaaatcatGCGCAATCTTGCACGAAGAAAACATCAACTGCTGCAGTTGGTGTCGTAACAACCGAAGCAGAAGTCGCACCTTCATTTCAGCACAAGACgggtgatgatgacgatgtcgCCGATTCCCAGCAAGAAGCCGCCATCGGGGAAGGCACTACAAATCTTAAAATAAAACTACCCGAAGTCGCTTGCactatttgtgcacagaaattcacTGATCAGGAGCTCTTTACCAAACATATTCAGATGCACGAAATGGAGTTGTACACTGACAATCCACTGGCAGCTATGTTCGACACTGGGCCCGCTGATCCAAATCAATTCTATCTGGATCGTGTCAACGATAATGGACAGTATGTGTGTGACATTTGTAACAAAGCATTTGCCCAGATGACCGCACTAAAGGTCCACCGCAAGTGGCATTTTCGAGGTGATAGCAAACAGACCCCTGCCGATGTAAATGCGCCAAAGACGATAAGACGCAAGAGAGAACTTAAATGCGATTACTGCCCGTCGACTTTCATCAGCTCGAACAACCTCAGGCGTCATATAGCCGAACTGCATAAATCCGAAATTTCCAACTGGCCGGAACCACCCAAAATTGAACCTGAAAAGTACCTTCAATGCACTAAATGTGACCTGAAATTCGAGACCAAGAAATATTGGATCGAACATAAAGTTAATGAAGCGAAGATTGCCAAACCATATGGCCCATTCCAGTGGGGTTGCGAGATCTGCGGGACGTACTTGTCACGTCGTGAAAAACTCATACATCACATGTTGGCGCACATTAAAGAGACCAACGGCCAGTTGAGTGCGGAAGGCGAAAACTATCCCGGAGAAAGTAACTCTCAGGATTCCGAATCATCCAGTCATCAAGGAGCATCTGAACAGAGGCAAatcgacgacgaggacgaagatgaggaggacgaggaggaagaaTTTGACGGCGATGAGGAAGATGCTGAAGAAACAGTCGATGCAGTAAACCACGATGACAACGCAAACGACGGACAAAATGACGATGACAACGATCAGCAATCACAGCTGGGACCAAGGCGGCTACCTGAATCGAATGACGACAGTAATGACTCAAGTGCCCAGAGCTCTGACTCGGACGATTCATCATCAGACGACGATGAACCAGAGCCATCTTTACATCGGGCGGAGCATAAAACACGGTTCCCCTGCGATCTATGTCAGGTGTACTTTGAATCATCGGCGGAACTACAACGGCATGTCACTAGTCATTTCCTTAACGGCCCGGGGTCAGTAACACTGACCACCATAACAAAGGACAAGCCTAATAAACCATTAGAAATCCATGCGaaagacgatgacgacgacgacgacgacgaagatgacGATATGACCGAGGCAGACGTTGTTGACTCTTAA
- Protein Sequence
- MTEESILRARQNCCRLCLAPDSECISIFNSYAADKEPLATKILSCVNIKVSPIDRLSLRICHACISYLNSWQSFKNRCVASQNKQRSWLDISKKMEKKQIGSAIPLSVGAPGGVCDGGGGGTGNVTGAGAGARGVPHEDGEEDQENSPLATSILEGISSLKKRRSLTVYPIPVHIKDEPVDEEEYDPKHDESDIDPTLFLERTEEEGSDNMSQKEQHLASLGLKQASNSVNPLNYLADYSFDEDKANRPSVDKSLEISATTTEVKEASCRACNLKFSTRANARRHERNLHPHLFSGMGLGNPGSKGLSVVASMQQGIKTTQAIRSVMKPDQLVLFDYDQPEKYQQLLTDEKILFMQRHEDFLQQYQNMTCNCCLRTHATYKNFMAHMRKKYHSLPRNLCFKCLKQNDSKALFISHLKKRNCINLYKVYNSLIDAGVLKKDSLGWSPDKLRAKELLVNKIYECKICSKHFRLKLEFRSHVYEEHADYQKKDVSPGHCGFCGLEIEDPFERKRHYNNMDCIVILRCITCEEKFDNHQKFLDHVYSKHLANNNEVQKSNLMKELSSTTSTESSPSKKSETPQKPQFFSRLPQSCNICGQHYNNYNNVLRHMESKHPDQLPQTYKCTLCLVGYPRLMNLREHMIEVHGMKVDKVRNNSFDYIVDSPTVQGTLPRGPDKMIADAYTGRYDYVMKDLMSITNGGTSLNENTNENDDDGNLGDMPAAKKIKLESGAVVAIGTANLKECPICSAVFNNNIGLSNHMRTHTTGEVGAEDEIPEEDDEVTEKKSIDPLFKRSLELAADRRFRRMRCRICQKRFSSKKSYRRHMLIDHQIRNVQFIKCKLCNAEFAYEKGLKVHMFKIHNTLLKDEMIVKQYECDICSIVYRTEEQLLLHKKTVHGNESAQADDELPQMMDQSMESTAPLYWYQCRYCPSNFNTNKKLAIHINSHYEFDSNDYSCKDCGNVYSGRKSLWVHRYKKHPPVADPSECLQCKKIFFDKQMLENHAQSCTKKTSTAAVGVVTTEAEVAPSFQHKTGDDDDVADSQQEAAIGEGTTNLKIKLPEVACTICAQKFTDQELFTKHIQMHEMELYTDNPLAAMFDTGPADPNQFYLDRVNDNGQYVCDICNKAFAQMTALKVHRKWHFRGDSKQTPADVNAPKTIRRKRELKCDYCPSTFISSNNLRRHIAELHKSEISNWPEPPKIEPEKYLQCTKCDLKFETKKYWIEHKVNEAKIAKPYGPFQWGCEICGTYLSRREKLIHHMLAHIKETNGQLSAEGENYPGESNSQDSESSSHQGASEQRQIDDEDEDEEDEEEEFDGDEEDAEETVDAVNHDDNANDGQNDDDNDQQSQLGPRRLPESNDDSNDSSAQSSDSDDSSSDDDEPEPSLHRAEHKTRFPCDLCQVYFESSAELQRHVTSHFLNGPGSVTLTTITKDKPNKPLEIHAKDDDDDDDDEDDDMTEADVVDS*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01254232;
- 90% Identity
- iTF_00671719; iTF_00671095; iTF_00672987;
- 80% Identity
- -