Esep015434.1
Basic Information
- Insect
- Eristalinus sepulchralis
- Gene Symbol
- hang
- Assembly
- GCA_944738805.1
- Location
- CALYJE010000160.1:432094-438599[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 16 0.027 2.9 8.6 1.3 3 23 170 191 169 191 0.93 2 16 0.011 1.2 9.9 2.7 1 23 361 384 361 384 0.91 3 16 0.00099 0.11 13.1 1.7 2 23 491 513 490 513 0.95 4 16 0.0074 0.81 10.4 0.1 1 23 521 544 521 544 0.95 5 16 1.9e-05 0.002 18.5 0.1 2 23 641 662 640 662 0.97 6 16 1.3e-05 0.0014 19.0 2.5 2 23 706 728 705 728 0.96 7 16 0.0028 0.3 11.7 0.3 2 23 737 759 736 759 0.95 8 16 0.0003 0.033 14.7 0.2 1 23 772 795 772 795 0.98 9 16 0.00021 0.023 15.3 1.0 1 23 823 845 823 845 0.99 10 16 0.00089 0.097 13.3 0.9 1 23 853 876 853 876 0.96 11 16 0.01 1.1 10.0 0.6 2 20 884 902 883 904 0.92 12 16 0.00013 0.014 15.9 0.4 3 23 962 982 961 982 0.98 13 16 1.6e-05 0.0017 18.8 0.1 1 23 1017 1039 1017 1039 0.98 14 16 4.2e-05 0.0045 17.5 0.2 2 23 1064 1086 1063 1086 0.93 15 16 0.019 2.1 9.1 0.3 2 19 1106 1123 1105 1125 0.93 16 16 0.0023 0.25 12.0 0.7 3 23 1141 1161 1141 1161 0.98
Sequence Information
- Coding Sequence
- ATGGAGAAAAAACAAATTGGCTCAGTGAATCCGCTCTCCGCTGGACAGCCAGTAGGCGTCTGCGATGGAGAAGGCGTCAGCGGTGTAGTGGGCATGAAGGCAGGCGTTCCGCATGATGACGGCGGGGAGGAACAGGAGAACAGCCCACTTGCCACATCGATTTTGGAAGGCATTTCTTCGCTGAAGAAACGGCGGTCTTTAACCGTTTACCCAATTCCTGTGCACATAAAGGACGAGCCCGTGGACGAGGATGAGTATGATATGAAACATGATGAATCCGATATTGATCCAACTCTCTTTCTGGAACGCAACGAAGAGGAGGGCTCCGACAATATGTCACAAAAGGAACAGCATTTAGCCTCTTTGGGTTTAAAACAGGCCTCAAATTCGGTTAATCCCTTAAGTTATCTGGCTGACTACAGTTTCGATGAAGAGAAAGCAAATCGGCCATCGGTTGATAAATCCCTAGAAATATCCACAACAACAGCCGAAGTAAAAGAGGCATCCTGCAGAGCTTGTAACTTAAAGTTCTCAACGAGAGCAAACGCCCGCCGACACGAGCGCAATCTTCATCCCCACCTCTTCTCCAGCATTGGACTGGGTGCGTCCGGGCCGAAAACATTCAGTATGGCTTCATCGATGCAACAAGGAACAAAAGCCTCTCAGGGGATTCGATCAGTGTTAAAGCCAGATCAACTCGGTCTCTTTGACTATGACCAGCCGGAGAAGTATCAGCAACTGCTCACAGATGACAAAATACTTTTCATGCAGAGACACGAGGACTTCCTGCAGCAATACCAGAACATGACGTGCAACTGCTGCTTACGCACGCACGCAACGTACAAAAACTTCATGGCACACATGCGCAAGAAGTACCACTCGCTGCCGAGAAACTTGTGCTTCAAGTGTCTGAAGCAAAACGACTCAAAGGCGCTCTTCATATCCCATCTTAAGAAGCGTAACTGTATTAACTTGTACAAGATCTACAACAGCCTCATTGATGCCGGGGTGCTGAAGAAGGACTCCTTGGGTTGGTCCCCAGATAAGCTGCGTGCCAAAGAATTGCTAGTGAATAAGATCTACGAGTGCAAGATCTGTTCGAAGCACTTCCGACTGAAGCTCGAATTCCGAAGCCATGTGTATGAAGAGCACGCGGATTATCAGAAGAAGGATGTCTTGCCGGGCCATTGTGGATTCTGCGGCCTGGAGATCGAGGATCCGTTTGAGCGGAAGCGGCACTACAACAACATGGACTGCATCGTCATACTGAGATGCATAACTTGCGAAGAGAAATTCGATAATCATCAGAAATTCCTTGATCATGTTTACTCCAAGCATTTAGCCAACAACAACGAAGCCCAGAAGAGCAATCTGATGAAGGAGCTCTCTTCAACGACTTCCACGGAGAGTTCACCGTCAAAGAAATCTGAAACGCCTCAGAAGCCACAGTTCTTTTCCCGTCTACCTCAAAGCTGCAACATTTGTGGCCAGCACTACAACAACTACAACAACGTCTTGCGACACATGGAGTCGAAGCACCCGGATCAATTGCCGCAAACTTACAAGTGCACCCTGTGCTTAGTCGGCTATCCCCGGCTAATGAACCTCAGGGAGCACATGATTGAAGTGCACGGCATGAAGGTGGACAAAGTACGAAACAACAGTTTCGACTACATTGTAGACTCACCAACGGTTCAAGGCAGTGTCCCACGGGGACCAGAGAAGATGACCGCCGATGCGTACACTGGGCGCTATGACTATGTCATGAAAGATTTGATGTCGATAACGAACGGAGGGACAACGCTTAACGAGAACACCAATGAAAATGACGAGGATGGAAACTTTGGGGATGTTCCATCGGCGAAGAAGATAAAACTTGAGTCGGGGGCGGTTGTGGCAATTGGCACCGCCAATTTGAAGGAGTGTCCCATATGTAGCGCAGTCTTCAACAACAACATTGGCCTCTCCAACCACATGCGCACGCATACAACTGGAGACGCTGGGCCGGATGACGATGTGCCTGAAGAAGACGATGAGGCGGGTGAGAAGAAACCAATTGATCCACTTTTCAAGCGCAGCTTGGAGTTAGCTGCAGATCGGCGATTCCGCCGAATGCGCTGTCGTATTTGCCAGAAGCGATTCTCCTCAAAGAAGAGCTACCGTCGTCACATGCTGATCGATCACCAGATCCGCAATGTGCAGTTCATCAAGTGCAAACTCTGCAATGCTGAGTTCGCCTACGAGAAGGGTCTCAAGGTGCACATGTTCAAGATACACAACACATTGCTGAAAGACGAAATGATTGTGAAGCAATTCGAGTGTGACATCTGCTCGATTGTGTATCGTACTGAGGAACAGCTGTTGCTTCACAAGAAGACCGTGCACGGCAACGAGAGCGCGCAAGCGGACGATGAATTGCCGCAAATGATGGATCAAAGCACGGAGTCTTCGGCTCCTCTCTACTGGTACCAGTGCCGATACTGTCCATCAAACTTCAACACTAACAAAAAATTGGCCATTCACATTAACTCGCATTATGAATTCGATTCGAATGACTACTCTTGCAAAGACTGCGGGAACGTGTACAGTGGGCGCAAAAGTCTGTGGGTACACCGCTACAAGAAGCATCCGCCTGTTGCCGACCCGTCCGAGTGTTCTCAGTGCAAGAAGATCTTCTTTGACAAGCAAATGCTGGAGAATCACTCGCAGTCATGTACGAAGAAGGCGTCAACAGCAGTGGTCACTGTAGGAGTGTCAGAAACAGATGTGGGGTCGTCCTTCCAGCACAAAACGGGTGACGACGATGACGTTGCTGAATCCCAGCAAGAAGCCCCAATTGGGGATGGCACTGCGAGCCTAAAAATAAAACTTCCCGAAGTCGCTTGCACCATTTGTGCACAGAAATTCACTGACCAGGAGCTCTTCACCAAGCACATTCAGATGCACGAAATGGAGTTGTACACCGACAACCCTCTAGCAGCTATGTTCGACACCGGGCCCGCCGATCCGAACCAATTCTACCTGGACCGTGTCAACGACAATGGGCAGTATGTGTGTGACATTTGTAACAAAGCCTTCGCGCAGATGACTGCACTGAAGGTCCACCGCAAGTGGCATTTCCGAGGTGATAGCAAACAGACTCCTGCCGATGTAAATGCGCCAAAGACGATAAAACGCAAGAGGGAACTTAAATGCGATTACTGCCCGTCGACCTTCATCAGCTCCAACAACCTCCGCCGCCATATTGCCGAACTACATAAGTCGGAAATATCCAACTGGCCCGAACCACCCAAAATTGAACCTGAGAAGTACCTCCAATGCACTAAATGTGACCTGAAGTTCGATACCAAGAAAGATTGGATCGAGCACAAAGTAAACGAAGCTAAGATTGCCAAGCCATTTGGCCCATTCCAGTGGGGCTGCGAGATCTGTGGGACGTACTTGTCCCGCCGTGAAAAGCTCATACATCACATGTTGGCGCACATCAAGGAGACCAACGGCCAGTTGAGCGTGGAGGGCGAAAATTATCCCGGAGAAAGTAACTCTCAGGACTCGGAAACATCAAGTCACCAAGCAGCGTCCGAACAGAGACAAATCGACGACGAGGACGATGATGAAGAAGACGAGGAAGAGGAGTTTGACGGCGATGAGGAAGACGCTGAGGAGACAGTCGACGCAGTAAACCATGATGACAACGCAAACGACGGACAGAACGACGACGACATTGACCAGCAACCACAGCTAGGAGCAAGACTAACACACGAATCGAACGACGACAGCAATGATTCAAGTGCCCAGAGTTCAGATTCAGATGACTCTTCATCCGAAGACGACGAACCGGAAGATGACGACGACGACGATGAAGACGACGATACGACCGAGGCAGACGGTGTTGACTCTTAA
- Protein Sequence
- MEKKQIGSVNPLSAGQPVGVCDGEGVSGVVGMKAGVPHDDGGEEQENSPLATSILEGISSLKKRRSLTVYPIPVHIKDEPVDEDEYDMKHDESDIDPTLFLERNEEEGSDNMSQKEQHLASLGLKQASNSVNPLSYLADYSFDEEKANRPSVDKSLEISTTTAEVKEASCRACNLKFSTRANARRHERNLHPHLFSSIGLGASGPKTFSMASSMQQGTKASQGIRSVLKPDQLGLFDYDQPEKYQQLLTDDKILFMQRHEDFLQQYQNMTCNCCLRTHATYKNFMAHMRKKYHSLPRNLCFKCLKQNDSKALFISHLKKRNCINLYKIYNSLIDAGVLKKDSLGWSPDKLRAKELLVNKIYECKICSKHFRLKLEFRSHVYEEHADYQKKDVLPGHCGFCGLEIEDPFERKRHYNNMDCIVILRCITCEEKFDNHQKFLDHVYSKHLANNNEAQKSNLMKELSSTTSTESSPSKKSETPQKPQFFSRLPQSCNICGQHYNNYNNVLRHMESKHPDQLPQTYKCTLCLVGYPRLMNLREHMIEVHGMKVDKVRNNSFDYIVDSPTVQGSVPRGPEKMTADAYTGRYDYVMKDLMSITNGGTTLNENTNENDEDGNFGDVPSAKKIKLESGAVVAIGTANLKECPICSAVFNNNIGLSNHMRTHTTGDAGPDDDVPEEDDEAGEKKPIDPLFKRSLELAADRRFRRMRCRICQKRFSSKKSYRRHMLIDHQIRNVQFIKCKLCNAEFAYEKGLKVHMFKIHNTLLKDEMIVKQFECDICSIVYRTEEQLLLHKKTVHGNESAQADDELPQMMDQSTESSAPLYWYQCRYCPSNFNTNKKLAIHINSHYEFDSNDYSCKDCGNVYSGRKSLWVHRYKKHPPVADPSECSQCKKIFFDKQMLENHSQSCTKKASTAVVTVGVSETDVGSSFQHKTGDDDDVAESQQEAPIGDGTASLKIKLPEVACTICAQKFTDQELFTKHIQMHEMELYTDNPLAAMFDTGPADPNQFYLDRVNDNGQYVCDICNKAFAQMTALKVHRKWHFRGDSKQTPADVNAPKTIKRKRELKCDYCPSTFISSNNLRRHIAELHKSEISNWPEPPKIEPEKYLQCTKCDLKFDTKKDWIEHKVNEAKIAKPFGPFQWGCEICGTYLSRREKLIHHMLAHIKETNGQLSVEGENYPGESNSQDSETSSHQAASEQRQIDDEDDDEEDEEEEFDGDEEDAEETVDAVNHDDNANDGQNDDDIDQQPQLGARLTHESNDDSNDSSAQSSDSDDSSSEDDEPEDDDDDDEDDDTTEADGVDS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01254232;
- 90% Identity
- iTF_00672356;
- 80% Identity
- -