Basic Information

Gene Symbol
Kdm5
Assembly
GCA_935413225.1
Location
CAKXYS010001296.1:43215-69161[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.7e-24 2e-20 74.3 0.1 2 89 117 200 116 200 0.94
2 2 0.12 9.2e+02 1.6 0.0 31 67 1248 1285 1229 1303 0.75

Sequence Information

Coding Sequence
ATGACGACCAAAGAGAAACAGTTGTTAAATGGAAATAATGGTTTAAAAAGTAATCCTGGAAGTTCAAAAAATTCACCAATTAAATGCAATGAACATTACAGTCAGTGCAAAGAAGAAGCTTTTCAATTTGAAGTACCACCAGAAGCCCCAGTGTTTTATCCAACTGATGAAGAATTTATGGACCCTTTGGCTTACATAGCCAAAATTAGACCCATCGCCGAAAATacaggaatatgtaaaattaaacCACCAGCAAAGTGGCAGCCTCCATTTGCTGTGGATGTAGATAAATTAAGGTTTACTCCCAGAATACAAAGGCTTAATGAACTAGAGgccAAAACaagagtaaaattaaattttcttgatCAGATTGCCAAATTCTGGGAATTGCAGGGATCCTCCCTAAAAATTCCTATGGTAGAGAGAAGGGTTCTAGATTTATATACTTTACATAGAGTTGTGCAATTAGAAGGTGGATTTGATGAGGTcactaaacaaagaaaatggtCCAAAGTTTCAATACGGCTGGGTTACCAGATTGGAAAAAATGTTGGcactattttaaaacaacattaTGAAAGACTTTTATTTCCATTTGATGTTTTTAAAGAAGGAAAAAGAGTTTGCAtaaaAATTGAGACGCCTGATGATGGAACTGAAAAAACTGACAAAGACTATAAACCCCACGGTATTGTTAATAGAATGGCAGTTAAGCCACCATCAGATAAAAATGCCCGTCGATCAAAACGATTTGAGGCAAACGACAAGGAAAAGACTGAAATAGAACTTAAGATAAAAGAAGAGAAATCAGACGATTTGGATGGTGATGATAAAAACAAGGAATTAAAAAGATTACAGTTTTATGGAGCTGGTCCCAAAATGGCTGGCTACGATGACAAAAAAGAACAGAAGCCTAGagctaaaaatatcaaatatgatTTTGATCCGttggccAAATATGTGTGTCACAATTGCAACAGAGGTGATGCTGAAGAATACATGTTACTATGTGATGGCTGCGATGATAGCTATCATACATTTTGTCTATTACCGCCCTTATCTGAAATACCCAAGGGTGACTGGAGATGTCCTAAATGTGTAGCTGAAGAAGTTTCTAAACCAACTGAGGCCTTTGGTTTTGAACAGGCTCAGAGAGAATATACCTTACAACAATTTGGAGAAATGGCTGATCAGTTTAAATCTGATTATTTTAATATGCCAGTTCatGTGGTTCCAACTGGTACAGTAGAACGAGAATTTTGGCGCATTGTATCATCCATCGATGAAGATGTTACAGTAGAATATGGCGCTGATTTGCACACCATGGACCATGGATCTGGATTTCCCACCAAATCATCTGCAAATCTTTTTCAATGTGATAAAGAATATGCAGAATCTAGTTGGAACTTAAACAATTTACCTGTTCTTGAGGGTTCTGTTTTGGGATACATTAATGCTGATATTTCTGGGATGAAGGTGCCATGGATGTATGTAGGAATGTGTTTTGCAACATTCTGTTGGCACAATGAAGACCACTGGTCCTATTCCATCAACTATCTACATTGGGGTGAGGCTAAGACTTGGTATGGAGTTCCTGGTAGTAAAGCTGAAGCATTTGAGGAAACCATGAAATCGGCAGCCCCAGAACTCTTTCACTCACAGCCTGATTTGTTACATCAACTTGTAACCATAATGAATCCAAACATCCTTATGAATGCTGGTGTGCCAGTTTACAGAACCGATCAACATGCTGGCGAGTTTGTTGTTACTTTTCCCCGAGCTTACCATGCTGGTTTCAATCAAGGGTACAACTTTGCTGAGGCAGTGAACTTTGCCCCAGCTGATTGGTTAAGAATGGGTAGAGAATGTATCCTCCACTATTCACATTTAAGACGATTTTGTGTATTTTCACATGATGAACTGGTGTGTAAAATGGCACTTGACAATGATAAACTTGATTTGACTATTGCCGCTGCGACCTATCAAGATATGCTTGTAATGGTCGATACTGAAAAGAAACTACGAAAAACTCTACTTGATTGGGGTGTCACAAATGCAGAACGTGAAGCCTTTGAGTTACTACCAGACGACGAAAgacaatgtgaaatatgcaAAACCACTTGTTTCTTATCTGCAATGACATGTTCCTGTTCATCAACTACTTTAGTCTGTTTaagacattataaaaacttatgTGAATGCCTACCGAAAAACAGGACTTTAAGATATCGATATACTCTTGATGAGCTACCAGTCATGTTGAAAGCACTTAAACTTAAAGCAGAGTCATTCGACCATTGGGTGGCTAAAGTTAAAGATGCACTCGATCCAAACACACCTAAAACTCTTAATTTAAGTGACCTAAAGGCACTACTTAGTGAAGCTGATGGAAAGAAATTCCCCAAGTGTGAGCTGCTTCAGACACTTACCAGTGCTGTTATAGATGCTGAGAAATGCGCCAGTGTAATTCACCAATTGGACCTGAATAAAATGCGCACCAGGACTAGGCATTCTAATGAAGCAAAATATAAGTTAACTGTTGAAGAACTTACTCTATTTTGTGAAGAAATCGACAGTCTCGCCTGCGTTTTAGATGAAGCCAAAAGTATAAGAGTGTTACTTCAGCAAACACAAAAATTTGAAACGAAAAGTGAAGAACTTTTACTACAACCATTAAAAGACAATTCACTTACAGAATTGGAAGCATGTCAGGCTCATGGAAATGGTCTTTGCATAGAGCTGCCTGGTCTAAAGCTGATTAATACCAGAATCAAGCAGGCTCAGTGGATGAAAGAAGTTGACAATTATAAGAATAAAACTGATGTTATGGGACTTGATGCTATCAAGAATTTAATACAAGCAGGTTGTTCTCTGCCGCCTCACACTGAAATGGAAGAGGAGCTATCAAAACTTCAACTTATACTACAGCAAGGTCAAGAGTGGGAGGAGAAAGCCCAAGAAGTTCTTAAATCTGAAGATGCTAGTGTACTACTTCTAGTTGACAAGCTTCTTAAGGATGCCGCAAAAATTTCCTGTCATTTGCCAACAGAAGGAATTCTTTACGATGCTATGAAGAAGGGCAGAGATTGGTTGAAACAACTTGAAGATATGAATTCGGCCGAGTACTACCCTTACTATAGCGCCATGGAAGAATTAATCAAGAAAGGACGTCAACTGACACTTCACTTGGTAGAGGCAGACAGAATGAATGACTACCTAATTTTGGCAAATGGATGGAAAGAGAAAACCAGCCGCTCATTTTTAAGAAAGGACTCTTCTTGTACCCTAATGGAGGCTCTATCTCCCAGAACAGTTTTACCCAGCATTATTAAGAATGCCAAAAAAGGTAAAAACGCCGATGATGAATTAAAATCAATAGCATTAACTAACACAATGGATCCAGCAACAGTTGTATCTTTATTTAAGGAAGCTGAAGAAGCAGAAATGTCAATgattaaaaaactaagacaaacTAACAAACTTAAAACTGTAGATCCAGCTGACACCACCACAACTTACTGCATTTGTGGAAGAGGCTTGTTTGGAATAATGATGAAGTGTGAGCTTTGTCAGGACTGGTTTCATTCCACTTGCTCTCAACTTCCAAAAATTGCATCTACTAAGTTTAAAGGCAACTTCTTAAATGTTGCTGTTAGCTTAGGATTTAAAGACTGCAAATTTATATGTTCAAATTGTCAAAGAACAAAGAGACCTCGCCTTGATACAATCCTTAGTCTTCTTATGTCCTTGCAGAAACTTTATGTTAGAGTACCTGAGGGTGAAGCCCTTCAATGCCTCACGGAGAGGGCTATGAACTGGCAAGATAGAGCCAGACAACTTTTACAAAATCCTGAACTTGAAAGAGCtaagattaaattaaattctctGAGCCAGAAGTTTACTGAAGCAGCTGCAAGGCAGAgaactgaaaaaattatttctaccgAGTTAAAACGAGCTTCCAAAAATCCAGAGCTCCACCAAAGAGTACAAGAAATAACCCCATTTAGTGGAGTAAATGAAGATGGCGTCACTTGTGATAGTGGCATAAATGATTCAGATGAGGCATCAAGAGAGTCTTCCAGAGACTCTGATGACCGAATGGGCGAACATGCCTACAGTCTTCACCTTCCGAAAAACGATGGCGAAGATTATATGGTGAGAATTCACCCAGACATAAAGAAGCAAATGGAAGACCTCCTAATGGAGGGAGACTTACTGGAAGTATACCTAGATGAGACTTTTGCCCTGTGGAAACTTATGCTTGGTTCCAGGGACCATGAACGAGAAATAATGCTTATAGATTTTGACGCTCATCTCAAGGCAGTACCTAAAAAACGCGGTAGGAAACGACTCTCTGATGATCTCATTGACTCTACAAAGAAATCTATTAAGACCATGAAAGCGGAAGGTGAAAAAAAGATACGCGGTAGAAAACAACAAACCAATAAAGACAGCACTCAGAAGAAACCGCGCGGTAAGCGCAGGGGCCGTCGTTGTCAATCTACGGCCTCAAATAGCAGTGACAGTGAAGATGAAGATTGTGCAGCAAATGGTTGCCAACGACCGACAGGACAAAATGTAGACTGGGTCCAATGTGATGGAGGATGTGAACAATGGTTTCATATGGCCTGTGTTGGCTTATCTGCAGAAGATATTAATGAAGATGAAGACTACATTTGTATCACCTGTTCTCGAAGTACTACTTTTGAAACTGTTGACCCAACGTGTGAAAGTCGTTCTAGTAGTCCTAGATCCCCTGACTCAACACAACCTTCCACATCAAAAGACGTTTCCTAG
Protein Sequence
MTTKEKQLLNGNNGLKSNPGSSKNSPIKCNEHYSQCKEEAFQFEVPPEAPVFYPTDEEFMDPLAYIAKIRPIAENTGICKIKPPAKWQPPFAVDVDKLRFTPRIQRLNELEAKTRVKLNFLDQIAKFWELQGSSLKIPMVERRVLDLYTLHRVVQLEGGFDEVTKQRKWSKVSIRLGYQIGKNVGTILKQHYERLLFPFDVFKEGKRVCIKIETPDDGTEKTDKDYKPHGIVNRMAVKPPSDKNARRSKRFEANDKEKTEIELKIKEEKSDDLDGDDKNKELKRLQFYGAGPKMAGYDDKKEQKPRAKNIKYDFDPLAKYVCHNCNRGDAEEYMLLCDGCDDSYHTFCLLPPLSEIPKGDWRCPKCVAEEVSKPTEAFGFEQAQREYTLQQFGEMADQFKSDYFNMPVHVVPTGTVEREFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKSSANLFQCDKEYAESSWNLNNLPVLEGSVLGYINADISGMKVPWMYVGMCFATFCWHNEDHWSYSINYLHWGEAKTWYGVPGSKAEAFEETMKSAAPELFHSQPDLLHQLVTIMNPNILMNAGVPVYRTDQHAGEFVVTFPRAYHAGFNQGYNFAEAVNFAPADWLRMGRECILHYSHLRRFCVFSHDELVCKMALDNDKLDLTIAAATYQDMLVMVDTEKKLRKTLLDWGVTNAEREAFELLPDDERQCEICKTTCFLSAMTCSCSSTTLVCLRHYKNLCECLPKNRTLRYRYTLDELPVMLKALKLKAESFDHWVAKVKDALDPNTPKTLNLSDLKALLSEADGKKFPKCELLQTLTSAVIDAEKCASVIHQLDLNKMRTRTRHSNEAKYKLTVEELTLFCEEIDSLACVLDEAKSIRVLLQQTQKFETKSEELLLQPLKDNSLTELEACQAHGNGLCIELPGLKLINTRIKQAQWMKEVDNYKNKTDVMGLDAIKNLIQAGCSLPPHTEMEEELSKLQLILQQGQEWEEKAQEVLKSEDASVLLLVDKLLKDAAKISCHLPTEGILYDAMKKGRDWLKQLEDMNSAEYYPYYSAMEELIKKGRQLTLHLVEADRMNDYLILANGWKEKTSRSFLRKDSSCTLMEALSPRTVLPSIIKNAKKGKNADDELKSIALTNTMDPATVVSLFKEAEEAEMSMIKKLRQTNKLKTVDPADTTTTYCICGRGLFGIMMKCELCQDWFHSTCSQLPKIASTKFKGNFLNVAVSLGFKDCKFICSNCQRTKRPRLDTILSLLMSLQKLYVRVPEGEALQCLTERAMNWQDRARQLLQNPELERAKIKLNSLSQKFTEAAARQRTEKIISTELKRASKNPELHQRVQEITPFSGVNEDGVTCDSGINDSDEASRESSRDSDDRMGEHAYSLHLPKNDGEDYMVRIHPDIKKQMEDLLMEGDLLEVYLDETFALWKLMLGSRDHEREIMLIDFDAHLKAVPKKRGRKRLSDDLIDSTKKSIKTMKAEGEKKIRGRKQQTNKDSTQKKPRGKRRGRRCQSTASNSSDSEDEDCAANGCQRPTGQNVDWVQCDGGCEQWFHMACVGLSAEDINEDEDYICITCSRSTTFETVDPTCESRSSSPRSPDSTQPSTSKDVS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2