Basic Information

Gene Symbol
Kdm5
Assembly
GCA_031761425.1
Location
JARFXV010000184.1:19846-25495[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 9.3e-25 8.1e-21 75.7 0.2 2 89 116 199 115 199 0.94
2 2 0.1 8.7e+02 1.9 0.0 32 68 1248 1285 1231 1303 0.73

Sequence Information

Coding Sequence
atgacTACCAAAGAGAAACAATTGAATGGAAGTAACAATTTCAAAAGCGGTCCTGGAAGTTCAAAAAATTCACCCATTAAATGCAGTGAACATTATAATCAATGCAAAGAAGAAGCTTTTCAATTTAAAGTACCACCAGAAGCTCCTGTGTTTTATCCAACTGAAGAGGAATTCTTGGATCCTTTAGCTTACATAGCTAAAATTAGACCTATTGCAGAAAACACGggaatatgtaaaataaaaccACCTGGGAGGTGGCAGCCTCCATTTGCTGTAGATGTAGATAAATTAAGGTTTACTCCTAGGATACAAAGATTAAATGAACTTGAGGCAAAAACTCGAGTCAAACTTAATTTTCTAGACCAAATTGCCAAATTTTGGGAATTGCAGGGTTCCTCCCTGAAAATTCCTATGGTTGAAAGAAGAGTTTTAGATTTATATACATTACACAGAATAGTACAATTAGAGGGTGGGTTTGAAGaagtaacaaaacaaagaaaatggtCTAAAGTATCAATTCGGATGGGATACCAAAtaggaaaaaatgttggaaCCATTTTGAAGCAACACTATGAAAGGCTTTTATATCCATATGATGTTTTTAAAGAAGGAAAAACAGTTAGTATAAAAATTGAAAATCCTGATGATGGAACTGAAAAAACAGATAAAGATTATAAACCACATGGTATTGTAAATAGAATGGCTGTTAAACCACCATCAGATAAGAATGCCAGACGTTCTAAAAGATTTGAAACTAATGACAAGGATAAGACTGAaATAGAACttaagataaaagaagaaaaaatggaAGATGCTGATGGTGATGACAAAAATAAAGAGTTAAAAAGATTGCAGTTTTATGGAGCTGGACCAAAAATGGCTGGATATGatgaaagaaaagaaacaaagccaagatcaaaaaatatcaaatatgatTTCGACCCTTTGGCAAAATATGTATGCCATAACTGTAATAGAGGTGATGCTGAAGAATATATGTTGCTCTGTGATGGATGTGATGATAGTTACCATACTTTCTGTTTAATGCCTCCTTTATCAGAGATCCCAAAAGGTGATTGGAGGTGTCCTAAATGTGTTGCAGAAGAAGTTTCCAAGCCTGTTGAAGCATTTGGCTTTGAACAAGCCCAAAGGGAATATACTTTACAACAATTTGGTGAAATGGCAGATCAGTTTAAAAGTGATTATTTCAATATGCCTGTACATATGGTTCCAACAAGTACAGTTGAAAGAGAATTTTGGAGAATAGTTTCATCCATTGATGAAGATGTTACTGTAGAATATGGAGCTGACTTACACACAATGGATCATGGGTCTGGATTTCCAACAAAATCATCTGCTAATTTATTTCAAGGAGACAAAGAATATGCAGAATCTAGTTGGAATTTGAATAATTTACCAGTATTAGAGGGATCAGTCTTAGGATATATTAATGCAGACATTTCTGGGATGAAGGTTCCATGGATGTATGTTGGAATGTGCTTTGCAACATTTTGTTGGCATAATGAAGACCACTGGTCATACTCTATAAATTATCTTCATTGGGGAGAAGCCAAAACTTGGTATGGAGTTCCTGGAAGTAAAGCAGAAGCATTTGAGGAAACAATGAAATCTGCTGCTCCTGAACTATTCCACTCCCAACCAGATTTACTCCATCAATTAGTGACAATAATGAATCCAAATATTCTAATGAATGCTGGAGTGCCCGTTTTTAGAACAGATCAACATGCTGGAGAATTTGTTGTCACTTTTCCAAGAGCCTATCATGCTGGGTTTAATCAAGGATACAATTTTGCTGAAGCAGTTAACTTTGCACCAGCTGACTGGTTAAGAATGGGTAGAGAGTGTGTCCTCCACTATTCACATTTAAGGAGATTCTGTGTCTTTTCCCATGATGAACTTGTATGTAAAATGGCTCTggacaatgaaaaattagaCTTAACTATAGCAGCTGCAACATATCAAGATATGCTTGTTATGGTTGACACTGAAAAGAAATTAAGGAAGGCTTTACTTGATTGGggTGTTACTAATGCCGAGCGTGAGGCATTTGAACTACTCCCAGATGACGAACGCCAATGTGAGGTATGCAAAACAACATGCTTTCTATCAGCAATGACATGTTCATGTTCAACCACCACCTTGGTTTGTCTTAGACATTATAAGAATCTTTGTGAGTGTCCTCCTAAGAACCGGACATTGCGCTATCGCTATACTTTAGATGAACTACCAGTAATGTTAAAAGCCCTAAAACTAAAAGCTGAATCGTTTGATCACTGGGTCGCCAAAGTTAAAGATGCATTGGATCCAAACACTCCAAAAACTCTCAATTTAAGTGATTTGAAAGCTTTGTTAAATGAGGCTGATGGAAAGAAGTTTCCTAAATGTGAACTCCTTCAAACCTTGACTAGTGCTGTCATAGATGCTGAAAAGTGTGCCAGTGTTATCCACCAATTAGACCTTAATAAAATGCGTACTAGAACCCGACATTCTAATGAAGCTAAATACAAGCTCACTGTTGAAGAATTAACATTGTTTTGTGAAGAAATTGATAGCTTAGCATGTGTTTTGGATGAGGCTAAGAGCATTAGAGTATTATTGGAACAAACTCAGAAATTTGAATCTAAAAGTGAAGAACTTCTATGCCAACACTTAAGAGAAAATGTCTTGTCAGAACTTGAAGCTTGCCAAACTCATGGAAATGGACTGTGTATTGAACTTCCAGGTTTAAAGCTCATCCAAACAAGAATTAAACAAGCCCAGTGGATGAAAGATCTAGAAAATTACAGGAACAAAACTGAAGTTATGGGACTTGATGTGATTAAAAACTTAATTCAAGAGGGATGCTCGTTGCCACCCCACTGTGAGATGGAAGAAGAACTGTCAAATCTTCAACTTATACTTCAACAAAGTCAAGAATGGGAAGAGAGAGCCGCCGAAGTTTTGAAATCGCAAGACGCTAATGTATTAATCCAAGTCGATAAGCTGTTAAAAGAGTCATCTAAAATATCTTGTCATTTACCTACAGAGGGTATTCTTTATGATGCTATGAAGAAGGGCAGAGATTGGCTGAGGCAATTGGAAGAAATGAATTCGGCTGAATACTACCCTTACTATAGTGCCATGGAAGAACTCATTAAAAAGGGCCGCACCCTCGCACTTCACTTAGTTGAAGTAGACAGAATGAATGACTATCTCATATTAGCTAATAATTGGAAGGAGAAAACGGGTCATGCCTTTCTCAGAAAAAATTCGTCATGTACACTTATGGAAGCACTTTCTCCCAGGACGGTTTTGCCAAGTAACatcaaaaataccaaaaaagggaaaaatgtAGATGATGACATAAAATCTATATCATTGACTAACACAATGGATCCTGCAACAGTTGTAGCTTTATTCAAAGAAGCTGAAGAAGCAGAGATGACAATGATTAGAAGGCTTAGACAAGCTAATAGACAAAAGTCACTAGATCCTAATGATACCACAACAACATACTGTATTTGTGGTAGGGGCCTTTTTGGTGTAATGATGAAATGTAAATTATGTCAAGACTGGTTCCATTCAACTTGCACTCAACTACCCAAAATAGCATCAACAAAATTCAAAGGAAATTTTCTTAATGTGTGTATAAGTTTAGGCTTTAAAGACTGTAAATATTTGTGCCCAAATTGTCAAAGAACCAAAAGACCTAGATTGGATATAATACTCAGTCTTCTCATGTCTCTACAAAAGCTTTATGTTAGAGTTCCAGAAGGAGAAGCTCTTCAATGCCTTACCGAACGCGCGATGAATTGGCAAGATAGAGCCAGACAACTTTTAAAACATCCTGAACTAGAAAAAGCCAAAGTAAAGCTGAGTTTATTAAGTCAGAAATATACAGAGGCAGCTGCTAGACAAAGGACTGAAAAAATTATCTCTACCGAGTTAAAACGTGCTTCCAAAAACCCAGAATTGCAGCAAAGAGTTCAGGAAATAACCCCATTTAGCGGTGTTAATGAAGATGGAGTAACTTGCGACAGTGGGATAAACGACTCAGATGAAGGTTCAAGAGAATCATCTAGAGATTCAGATGATCGAATGGGAGAACATGCGTATAGTTTGCATATGCCTAAAAACGACGGTGAAGATAATGTCATCAGAATTCATCAGGACATAAAGAAACAATTAGAAGAACTTCTAATGGAAGGTGATTTACTTGAAGTTTACCTAGATGAAACATTTGCTCTCTGGAAACTTATGTTAGCGTCCACGGATCCTGAACAAGACATAATACTTATCGATTTTGATGCTCACCTTAAAAATGCGCCCAAGAAACGAGGTAGGAAGAGGCTTTCAGATGACCTAATCGACTCTACAAAGAAATCTATAAAGTCGATGAAACCGGATGGAGAAAAGAAAATTCGAGGTCGGAAGCAACAGAGCACAAATAAAGACGCTACTCAAAAGAAACAGCGAAGCAAACGCAGAGGCAGAAGATGTCAATCGACAGCCTCAAACAGCAGTGACAGTGAAGATGAAGATTGCGCTGCTAACGGTTGTCAAAGACCAACAGGACAAAATGTGGACTGGGTGCAGTGTGATGGGGGTTGTGAACAATGGTTTCATATGGCCTGCGTTGGTTTATCAGCAGAAGATATTAATGAAGATGAAGACTATATTTGTATTACTTGTTCTCGAAGTACAACATTCGAGAGTGTTGATACATGCGAGAGCAGATCGAGCAGTCCAAGATCCCCGGATTCCACGCAACCTTCCACTTCGAAAGACGTTTCCTAG
Protein Sequence
MTTKEKQLNGSNNFKSGPGSSKNSPIKCSEHYNQCKEEAFQFKVPPEAPVFYPTEEEFLDPLAYIAKIRPIAENTGICKIKPPGRWQPPFAVDVDKLRFTPRIQRLNELEAKTRVKLNFLDQIAKFWELQGSSLKIPMVERRVLDLYTLHRIVQLEGGFEEVTKQRKWSKVSIRMGYQIGKNVGTILKQHYERLLYPYDVFKEGKTVSIKIENPDDGTEKTDKDYKPHGIVNRMAVKPPSDKNARRSKRFETNDKDKTEIELKIKEEKMEDADGDDKNKELKRLQFYGAGPKMAGYDERKETKPRSKNIKYDFDPLAKYVCHNCNRGDAEEYMLLCDGCDDSYHTFCLMPPLSEIPKGDWRCPKCVAEEVSKPVEAFGFEQAQREYTLQQFGEMADQFKSDYFNMPVHMVPTSTVEREFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKSSANLFQGDKEYAESSWNLNNLPVLEGSVLGYINADISGMKVPWMYVGMCFATFCWHNEDHWSYSINYLHWGEAKTWYGVPGSKAEAFEETMKSAAPELFHSQPDLLHQLVTIMNPNILMNAGVPVFRTDQHAGEFVVTFPRAYHAGFNQGYNFAEAVNFAPADWLRMGRECVLHYSHLRRFCVFSHDELVCKMALDNEKLDLTIAAATYQDMLVMVDTEKKLRKALLDWGVTNAEREAFELLPDDERQCEVCKTTCFLSAMTCSCSTTTLVCLRHYKNLCECPPKNRTLRYRYTLDELPVMLKALKLKAESFDHWVAKVKDALDPNTPKTLNLSDLKALLNEADGKKFPKCELLQTLTSAVIDAEKCASVIHQLDLNKMRTRTRHSNEAKYKLTVEELTLFCEEIDSLACVLDEAKSIRVLLEQTQKFESKSEELLCQHLRENVLSELEACQTHGNGLCIELPGLKLIQTRIKQAQWMKDLENYRNKTEVMGLDVIKNLIQEGCSLPPHCEMEEELSNLQLILQQSQEWEERAAEVLKSQDANVLIQVDKLLKESSKISCHLPTEGILYDAMKKGRDWLRQLEEMNSAEYYPYYSAMEELIKKGRTLALHLVEVDRMNDYLILANNWKEKTGHAFLRKNSSCTLMEALSPRTVLPSNIKNTKKGKNVDDDIKSISLTNTMDPATVVALFKEAEEAEMTMIRRLRQANRQKSLDPNDTTTTYCICGRGLFGVMMKCKLCQDWFHSTCTQLPKIASTKFKGNFLNVCISLGFKDCKYLCPNCQRTKRPRLDIILSLLMSLQKLYVRVPEGEALQCLTERAMNWQDRARQLLKHPELEKAKVKLSLLSQKYTEAAARQRTEKIISTELKRASKNPELQQRVQEITPFSGVNEDGVTCDSGINDSDEGSRESSRDSDDRMGEHAYSLHMPKNDGEDNVIRIHQDIKKQLEELLMEGDLLEVYLDETFALWKLMLASTDPEQDIILIDFDAHLKNAPKKRGRKRLSDDLIDSTKKSIKSMKPDGEKKIRGRKQQSTNKDATQKKQRSKRRGRRCQSTASNSSDSEDEDCAANGCQRPTGQNVDWVQCDGGCEQWFHMACVGLSAEDINEDEDYICITCSRSTTFESVDTCESRSSSPRSPDSTQPSTSKDVS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00386968;
90% Identity
iTF_01238345;
80% Identity
-