Basic Information

Gene Symbol
Kdm5
Assembly
GCA_034092305.1
Location
JASJET010000068.1:30570929-30577756[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.3e-24 1.7e-20 74.9 0.1 2 89 117 200 116 200 0.94
2 2 0.26 1.9e+03 1.0 0.0 31 65 1248 1283 1232 1301 0.79

Sequence Information

Coding Sequence
ATGACGACTAAAGAGAAACAGTTGTTAAATGGAAATAATGGTATAAAAAGTAATCCTGGAagttcaaaaaattcaccaatcAAGTGCAGTGAACACTATAATCAATGCAAAGAAGAGGCCTTTCAATTTGAAGTACCACCAGAAGCTCCAGTATTTTATCCAACTGAAGAAGAATTTTTGGACCCTTTGGCTTACATAGCCAAAATTAGACCCATCGCCGAAAATACaggaatatgtaaaattaaacCACCAGCGAGGTGGCAGCCTCCATTTGCTGTAGATGTGGATAAATTAAGATTTACTCCTAGAATACAAAGGCTAAATGAATTAGAGGCCAAAACTCGtgtgaaattaaattttcttgatcagATAGCCAAATTCTGGGAATTGCAGGGATCCTCCCTAAAAATTCCTATGGTTGAAAGAAGAGTTTTAGATTTATATACCCTACATAGAGTAGTACAACTAGAAGGGGGATTTGACGAAGTCACTAAGCAAAGAAAATGGTCCAAGGTTTCAGTCCGACTAGGTTACCAAATCGGAAAAAATGTTGGCACTATTTTAAAACAACATTATGAGAGACTTTTATTTCCTTTTGatgtttttagagaaggaaaaagAGTTTGCATAaaaattgaAAGCCCAGATGATGGGACTGAGAAAACCGACAAAGATTATAAGCCTCATGGTATAGTTAATAGAATGGCTGTTAAACCACCTTCGGATAAAAATGCTAGACGATCCAAACGATTTGAGGCAAATGACAAGGAAAAGACTGAAataGAACTTAAGATAAAGGAAGAAAAATCAGACGATACGGATAGTGAAGATAAAAACAAAGAATTAAAAAGACTACAATTTTATGGTGCTGGTCCGAAAATGGCTGGCTACGATGACAAAAAAGATCAAAAACCTaggacgaaaaatataaaatatgattttgatcCGttggCAAAATATGTATGCCATAATTGTAATAGAGGTGATGCTGAAGAATACATGTTGTTATGTGATGGTTGCGATGATAGCTACCATACTTTTTGCCTATTACCTCCATTATCTGAAATTCCAAAGGGTGACTGGAGATGTCCTAAATGTGTAGCTGAAGAAGTTTCAAAACCAACTGAAGCTTTTGGATTTGAACAAGCCCAAAGAGAGTACACTTTACAGCAGTTTGGAGAGATGGCAGATCAGTTTAAATCTGACTATTTTAATATGCCAGTTCATATGGTTCCAACAAACACAGTAGAACGAGAATTTTGGCGCATTGTTTCATCCATCGATGAGGATGTTACAGTAGAATATGGTGCTGATTTACACACAATGGATCATGGATCTGGATTTCCCACCAAATCATCTGCAAATTTATTTCAATGTGACAAAGAATATGCTGAATCAAGTTGGAACTTAAACAATTTGCCGGTTCTTGAAGGCTCTGTTTTGGGTTATATTAACGCTGATATTTCTGGAATGAAGGTACCATGGATGTATGTAGGCATGTGTTTTGCAACATTTTGCTGGCATAACGAAGACCACTGGTCCTATTCTATAAACTATCTTCATTGGGGTGAAGCTAAGACTTGGTATGGGGTCCCTGGATGCAAAGCAGAAGCATTTGAAGAAACAATGAAATCAGCTGCTCCGGAACTATTTCACTCACAACCTGACTTATTGCATCAACTTGTTACAATTATGAATCCAAACATTCTTATGAATGCTGGTGTACCAGTTTACAGAACAGATCAACATGCGGGAGAATTTGTTGTTACTTTTCCTCGAGCTTACCATGCTGGTTTCAATCAAGGATATAATTTTGCTGAGGCAGTCAACTTTGCCCCAGCTGATTGGCTAAGAATGGGTAGAGAGTGTATTCTGCATTATTCACATTTAAGAAGATTCTGTGTATTTTCTCATGATGAACTTGTATGTAAGATGGCACTTGACAATGAGAAGCTCGATTTAACCATTGCCGCTGCTACTTATCAGGACATGCTTGCTATGGTCGATACTGAAAAGAAGCTAAGGAAAATTTTACTAGATTGGGGTGTCACAAATGCTGAACGCGAAGCCTTTGAATTACTCCCAGATGATGAAAGGCAATGTGAAGTATGTAAAACTACTTGCTTTCTATCTGCTATGACATGTTCTTGCTCAACAACTACTCTAGTTTGCTTGAGACATTACAAGAATTTGTGTGAATGTCCTCCAAAAAATAGAACGTTACGATACCGATACACTCTTGATGAACTACCTGTTATGTTGAAAGCACTAAAACTTAAAGCAGAGTCTTTTGATCATTGGGTGGCCAAAGTTAAAGATGCTCTTGATCCCAATACACCCAAGACCCTTAATTTAAGTGACCTAAAAGCATTACTTAATGAAGCTGATGGCAAAAAGTTCCCAAAATGTGATCTGCTTCAAACACTCACCAGCGCAGTGATAGATGCTGAAAAATGTGCGAGTGTAATCCACCAATTAGACCTCAATAAAATGCGTACTAGAACTAGACATTCGAATGAAGCAAAGTATAAGCTGACAGTTGAAGAACTTACCttattttgtgaagaaattgATAGTCTTGCTTGTGTTTTGGATGAGTCGAAAAGTATAAGAGTGTTACTTCAACAAACACAAATGTTTGAAACTAGAAGTGAAGAACTTTTAACACAACCATTAAGAGAAAATTCACTTGCAGAATTGGAAGCATGTCAGTCCCATGGAAATGGTCTCTGCATAGAGCTTCCAggcttaaaattaattaataccaGAATAAAGCAGGCACAATGGATGAAAGAAtgtgaaaactataaaaataaaactgatgttATGGGACTTGAAGCTACCAAAAAATTAATACAGGATGGTTGTTCTTTACCACCTCATTCTGAAATGGAAGAAGAGTTATCAAATCTTCAATTAATACTACAGCAAAGCCAGGAATGGGAGGAAAGAGCCCAAGAAGTTCTTAAATGTCAAGACGCGACTGTACTAGTTCAAGTCGACAAACTTCTAAAAGATGCATCaaaaatttcttgtcatttgCCAACAGAGGTTGTTCTTTATGATTCCATGAGGAAGGGTAGGGAGTGGTTGAAACAACTTGAGGAGATGAACTCCGCCGAATACTACCCATATTATAGTGCCATGGAAGAACTAATCAAAAGAGGACGTCAACTTACACTTCACTTGGTGGAAGTAGACAGAATGAATGATTACCTTATTTTAGCAAATGGTTGGAAAGAGAAAACGAGCCGATCGTTTCTAAGGAAAGATTCATCCTGTACACTTATGGAAGCCTTATCTCCTAGAACAGTTTTACCTAGCAgtattaaaaataccaaaaaaggtaaaaatgttGATGATGAGTTGAAATCAATTGCACTAACTAACACAATGGATCCAGCAACGGTGGTATCATTATTTAAAGAAGCTGAAGAAGCAGAGATGTCTATGATTAAGAAATTAAGACAAGCTAACAAACTTAAGTCTTTAGATCCAAACGACACCAATACAACTTACTGCATTTGTGGAAGGGGTTTGTTCGGTGTAATGATGAAATGTGAGCTCTGCCAAGATTGGTTCCACTCGTCTTGTTGCCAGCTTCCAAAAATTGCTAGTACAAAGTTAAAgggcaattttttaaatgttgctGTTAGCTTAGGATTTAAAGACTGTAAATATATTTGTCCAAACTGCCAGAGAACGAAAAGACCACGTCTTGACACAATTCTTAGCCTCCTGATGTCATTACAAAAACTTTATGTAAGGGTACCTGAAGGGGAAGCCCTTCAGTGTCTTACAGAGAGGGCTATGAATTGGCAAGATAGAGCTAGACAGCTTTTGCAAAATACTGAACTAGAAAGAGCCaagattaaattaaatgttttaagcCAAAAGTTTAGTGAAGCAGCTGCAAGGCAAAGAACTGAAAAAATCATTTCAACTGAGTTAAAAAGAGCTTCCAAAAATCCAGAGCTCCATCAAAGAGTACAAGAAATAACCCCCTTCAGTGGAGTCAATGAAGATGGCATGACTTGCGACAGTGGCATTAATGATTCAGATGATGCTTCAAGAGAATCTTCTAGAGATTCTGACGATCGAATGGGAGAACATGCCTATAGTCTTCACCTTCCTAAAAACGATGGCGAAGAATATATGGTGAGAATTCAACCGGACATCAAGAGGCAAATGGAGGATCTCTTAATGGAAGGAGATTTATTAGAAGTATACTTAGATGAAACTTTTGCCCTGTGGAAGCTCATGCTTGCATCTAGGGATCCTGAACGAGAAATCATGCTTATAGATTTTGATGCACACCTTAAGACAGCACCTAAAAAACGCGGCAGGAAAAGACTATCTGATGATCTCATTGATTCCACAAAGAAATCTATTAAGACCGTGAAAACAGAAGGTGAAAAGAAGATACGAGGTCGAAAACAGCAGACAACTAATAAAGACAATACCCAAAAAAAACAGCGCGGCAAACGCAGGGGACGACGTTGCCAATCAACTGCGTCAAATAGCAGTGACAGTGAGGACGAAGATTGTGCTGCAAATGGTTGCCAACGCCCGACTGGACAAAACGTTGATTGGGTTCAATGTGATGGTGGATGTGAACAATGGTTTCATATGGCATGTGTCGGTTTGTCCGCAGAAGATATTAATGAAGACGAAGACTATATTTGTATTACCTGTTCTCGAAGTACTACTTTTGAAAGTGTTGATACGTGTGAAAGTCGATCTAGTAGCCCTAGATCGCCCGATTCAACCCAACCTTCCACTTCAAGAGACGTTTCCTAG
Protein Sequence
MTTKEKQLLNGNNGIKSNPGSSKNSPIKCSEHYNQCKEEAFQFEVPPEAPVFYPTEEEFLDPLAYIAKIRPIAENTGICKIKPPARWQPPFAVDVDKLRFTPRIQRLNELEAKTRVKLNFLDQIAKFWELQGSSLKIPMVERRVLDLYTLHRVVQLEGGFDEVTKQRKWSKVSVRLGYQIGKNVGTILKQHYERLLFPFDVFREGKRVCIKIESPDDGTEKTDKDYKPHGIVNRMAVKPPSDKNARRSKRFEANDKEKTEIELKIKEEKSDDTDSEDKNKELKRLQFYGAGPKMAGYDDKKDQKPRTKNIKYDFDPLAKYVCHNCNRGDAEEYMLLCDGCDDSYHTFCLLPPLSEIPKGDWRCPKCVAEEVSKPTEAFGFEQAQREYTLQQFGEMADQFKSDYFNMPVHMVPTNTVEREFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKSSANLFQCDKEYAESSWNLNNLPVLEGSVLGYINADISGMKVPWMYVGMCFATFCWHNEDHWSYSINYLHWGEAKTWYGVPGCKAEAFEETMKSAAPELFHSQPDLLHQLVTIMNPNILMNAGVPVYRTDQHAGEFVVTFPRAYHAGFNQGYNFAEAVNFAPADWLRMGRECILHYSHLRRFCVFSHDELVCKMALDNEKLDLTIAAATYQDMLAMVDTEKKLRKILLDWGVTNAEREAFELLPDDERQCEVCKTTCFLSAMTCSCSTTTLVCLRHYKNLCECPPKNRTLRYRYTLDELPVMLKALKLKAESFDHWVAKVKDALDPNTPKTLNLSDLKALLNEADGKKFPKCDLLQTLTSAVIDAEKCASVIHQLDLNKMRTRTRHSNEAKYKLTVEELTLFCEEIDSLACVLDESKSIRVLLQQTQMFETRSEELLTQPLRENSLAELEACQSHGNGLCIELPGLKLINTRIKQAQWMKECENYKNKTDVMGLEATKKLIQDGCSLPPHSEMEEELSNLQLILQQSQEWEERAQEVLKCQDATVLVQVDKLLKDASKISCHLPTEVVLYDSMRKGREWLKQLEEMNSAEYYPYYSAMEELIKRGRQLTLHLVEVDRMNDYLILANGWKEKTSRSFLRKDSSCTLMEALSPRTVLPSSIKNTKKGKNVDDELKSIALTNTMDPATVVSLFKEAEEAEMSMIKKLRQANKLKSLDPNDTNTTYCICGRGLFGVMMKCELCQDWFHSSCCQLPKIASTKLKGNFLNVAVSLGFKDCKYICPNCQRTKRPRLDTILSLLMSLQKLYVRVPEGEALQCLTERAMNWQDRARQLLQNTELERAKIKLNVLSQKFSEAAARQRTEKIISTELKRASKNPELHQRVQEITPFSGVNEDGMTCDSGINDSDDASRESSRDSDDRMGEHAYSLHLPKNDGEEYMVRIQPDIKRQMEDLLMEGDLLEVYLDETFALWKLMLASRDPEREIMLIDFDAHLKTAPKKRGRKRLSDDLIDSTKKSIKTVKTEGEKKIRGRKQQTTNKDNTQKKQRGKRRGRRCQSTASNSSDSEDEDCAANGCQRPTGQNVDWVQCDGGCEQWFHMACVGLSAEDINEDEDYICITCSRSTTFESVDTCESRSSSPRSPDSTQPSTSRDVS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00386968;
90% Identity
iTF_01238345;
80% Identity
-