Rfer020829.1
Basic Information
- Insect
- Rhynchophorus ferrugineus
- Gene Symbol
- Kdm5
- Assembly
- GCA_014462685.1
- Location
- JAACXV010000013.1:1894535-1902026[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 6.1e-25 2e-21 76.5 0.1 2 89 116 199 115 199 0.94 2 3 1.6 5.1e+03 -1.7 0.0 29 47 929 944 916 967 0.80 3 3 0.18 5.9e+02 1.3 0.0 31 66 1246 1282 1229 1301 0.71
Sequence Information
- Coding Sequence
- ATGACTACCAAAGAGAAACAGTTGAATGGAActaacaatttcaaaaatatcccTGGAAGTTCAAAAAATTCATCAATTAAATGTAATGAACATTATAATCAATGTAAAGAAGAGGCTTTCCAATTTAAAGTACCACCAGAAGCCCCAGTATTTTATCCAACTGAAGAAGAATTCTTGGATCCTTTGGCTTACATAGCTAAAATTAGACCAATTGCAGAAAACACgggaatatgtaaaattaaaccacctgggagGTGGCAACCTCCATTTGCTGTTGATGTTGATAAATTAAGATTTATTCCTAGGATTCAGAGATTAAATGAACTAGAGGCGAAAACTCGTGTTAAACTTAATTTTCTGGATCAAATTGCCAAATTTTGGGAATTACAAGGATCCTCCCTAAAAATTCCAATGGTTGAAAGAAGGGTTCTAGATTTATACACTTTACATAGAATAGTACAATTAGAAGGTGGGTTTGAAGAAGTAACAAGACAAAGAAAATGGTCTAAAGTATCTTCACGTATGGGATACCAAATAGGAAAAAATGTTGGTACAATCCTTAAGCAACATTACGAAAGGCTTTTATTTCCCTATGATGTTTTCAAGGAAGGAAAAACAGTTAGTATAAAACTTGAGAACCCTGATGATGGAACTGAAAAAACTGATAAAGATTATAAACCACATGGTATTGTAAATAGAATGGCAGTTAAACCACCATCAGATAAGAATGCTAGACGTTCTAAAAGATTTGAAACTAATGACAAGGATAAGACTGAAatagaACTTaagataaaagaagaaaaaattgatGATGATGGAGATGACAAAAACAAGGAATTGAAGAGGTTACAATTTTATGGAGCTGGACCTAAAATGGCTGGCTATGACGATAAGAAAGAAACTAAACCAAGATCAAAGAATGTTAAATATGAGTTTGATCCTTTGGCAAAATATGTATGTCATAACTGCAATAGAGGTGATGCAGAAGAATATATGCTGCTTTGTGACGGTTGTGACGATAGTTACCATACATTCTGTCTGATGCCACCTCTATCCGAAATCCCTAAGGGTGATTGGAGATGCCCTAAATGTGTTGCAGAAGAAGTTTCTAAACCTGTCGAAGCATTTGGTTTTGAACAAGCACAAAGAGAATATACTCTACAACAGTTTGGGGAAATGGCAGATCAATTTAAAagcgattattttaatatgccaGTACATATGGTGCCAACGAATACAGTAGAAAGAGAATTTTGGAGAATAGTTTCCTCAATCGATGAAGATGTTACGGTAGAGTATGGAGCAGATTTACATACAATGGATCATGGATCTGGATTCCCGACAAAGTCATCTGCTAATCTATTTCAAGGAGATAAAGAATATGCAGAATCCAGTTGGAATTTAAACAACTTACCAGTATTAGAAGGATCAGTTTTAGGCTATATTAATGCAGATATTTCAGGAATGAAAGTTCCTTGGATGTACGTTGGAATGTGCTTTGCAACATTTTGCTGGCACAATGAAGATCATTGGTcttattcgattaattatctTCACTGGGGAGAAGCTAAAACTTGGTACGGAGTTCCTGGTAgtaaagcagaagcatttgaaGATACAATGAAATCTGCTGCACCTGAATTGTTTCATTCACAACCTGATTTACTCCATCAATTAGTAACCATAATgaatccaaatattttaatgaatgcaGGTGTTCCTGTATATAGAACAGATCAGCACGCTGGAGAATTTGTTGTCACTTTCCCAAGAGCTTATCATGCTGGGTTCAATCAAGGGTATAATTTTGCTGAAGCAGTCAATTTTGCTCCAGCTGACTGGTTAAGAATGGGTAGAGAATGTGTTTTACACTATTCACATCTAAGAAGATTCTGTGTATTTTCTCATGACGAACTCGTGTGTAAGATGGCTCTTGATAatgagaaattagatttaactaTAGCAGCTGCAACTTATCAAGATATGCTTGTTATGGTTGACACTGAGAAGAAGTTAAGAAAGGCTTTACTAGATTGGgGTGTTACTAATGCGGAACGTGAAGCATTCGAGTTACTACCGGATGACGAACGTCAATGTGAAGTGTGTAAAACAACATGCTTCTTATCAGCGATGACGTGTTCCTGTTCAAAGACCACTTTAGTTTGTCTTAGGCATTACAAAAACCTTTGTGAATGCCCTCCTAAAAACCGAACTTTGCGATATCGTTACACGCTGGATGAACTACCGGTTATGTTAAAAGCTTTGAAGCTAAAAGCTGAATCATTTGATCATTGGGTTGCTAAAGTTAAGGATGCGTTAGATCCAAATACGCCTAAGACCCTTAACTTGAATGACTTAAAAGCTTTGTTGAAAGAGGCTGATGGAAAGAAATTTCCTAAATGTGAGCTGCTTCAGACACTAACTAATGCGGTAATAGATGCAGAAAAATGTGCAAGTGTCATACACCAGTTAGATCTTAACAAGATGCGTACGAGAACTAGACATTCTAACGAagcgaaatataaattaaccgTGGAGGAGTTGACTTTATTTTGTGAGGAAATCGATAGTCTAGCATGTGTTTTGGATGAGGCAAAGAGCATTAGAGTATTACTGGAACAAACTCAAAAGTTTGAATCCAAAAGTGAAGAACTTCTTCGCCAGCCTTTGAAAGAAAACGTCTTGTCAGAATTAGAATCTTGCCAATCTCATGGCAACGGGCTTTGTATAGAACTACCAGGGTTAAAGCTGATTCAGACAAGAATAAAACAAAGCCAATGGATGAAAGACTTAGATAACTACAGACTCAAAACTGAAGTTATGGGACTAGAAGTTATCAAAAATCTAATTCAAGAAGGATGTTCCTTACCACCTCACAGTGAAATGGAAAGGGAATTATCAAATCTTCAGCTTATACTTCAACAGAGCCAAGAATGGGAAGAGAAAGCTGCTgaagttttaaaatcagaagATTCTGGTGTATTAATACAAGTTGATAAACTGCTAAAAGAATCTTCTAAAATATCCTGTCATTTACCAACAGAAGATATTCTGTATGATGCTATGAAAAAAGCAAGGGATTGGCTGAGACAACTAGACGAAATGAATTCAGCCGAATATTATCCTTACTATAGTGCCATGGAAGAACTAATTAAGAAAGGGCGTACCCTTGCACTCCATTTAGTTGAGGTAGATAAAATGAATGATTATCTGACATTAGCTAATAACTGGAAGGAGAAAACAGCTCATGCTTTTCTCAGAAAAAATTCTGCTTGTACTCTGATGGAAGCATTGTCTCCTAGAACAGTTTTACCAAGCAGCATTAAAAATACGAAAAAGGGAAAGAATGTAGACGATGATATCAAATCTATAGCTTTAACCAACACCATGGATCCCGCAACAGTTGTAGCATTATTCAAAGAAGCTGAAGAAGCAGAAATGGCGATGATCAGAAAACTTAGACAAGCTAATAGACAGAAATCACTTGATCCTAATGAAACTACCACAACATATTGCATTTGTGGCAGAGGTCTTTTTGGCATCATGATGAAATGTGAATTATGTCAGGATTGGTTCCATTCAACTTGCACTCAATTACCAAAAATAGCTTCGACAAAATTCAAGGgtaattttctcaatatttgTATAAGTTTGGGATTCAAAGACTGTAAATATGTATGCCCGAATTGTCAGAGAACTAAAAGACCTAGATTGGATGTCATCCTCAATCTACTTATGTCTTTGCAAAAGCTTTATGTTAGAGTTCCTGAAGGAGAAGCTCTACAATGCCTTACCGAACGTGCTATGAACTGGCAAGATAGAGCTAGAAATCTTTTAAAACACACTGAACTGGAAAAGGCCAAAGTAAAGCTAAGTTTATTAAGCCAGAAATACACAGAAGCAGCAGCTAGACAAAGGACTGAAAAAATAATCTCCACTGAGTTAAAACGAGCTTCCAAGAATCCAGAGTTACAACAAAGAGTTCAAGAAATTACACCGTTTAGCGGTGTTAATGAAGATGGGGTAACTTGCGATAGCGGAATAAACGATTCTGATGAAGGATCAAGAGAATCGTCTAGGGATTCCGATGACAGAATGGGAGAACATGCTTATAGCTTACACTTGCCCAAGAATGATGGAGAGGATAACGTTATCAGGATCCATCcggatattaaaaaacaattggaGGAGCTTTTAATGGAAGGTGATTTGTTGGAAGTGTATTTAGACGAAACATTTGCTCTTTGGAAGTTAATGTTAGCATCTACGGATCCAGAACAAGATGTAATAATCATCGACTTTGATGCGCATCTTAAGAATGCGCCCAAAAAACGAGGTAGGAAAAGACTTTCCGATGACATTATTGATTCAACAaagaaatcaataaaatcaatgaaaGCGGACGGTGAAAAGAAAATACGTGGACGAAAACAGCAGAGCACTAACAAAGATTCTGCTCAGAAGAAACAGCGAAGCAAACGTAGAGGTAGACGATGTCAGTCAACAGCCTCAAACAGTAGTGATAGTGAGGATGAAGATTGTGCTGCTAGCGGTTGTCAACGACCTACGGGACAAAACGTAGACTGGGTACAGTGTGATGGAGGCTGTGAACAATGGTTCCATATGGCTTGCGTTGGTCTATCCGCTGAAGATATTAATGAAGATGAGGactatatttgtattacttGTTCACGAAGTACAACATTCGAAAGCGTAGACACGTGCGAGAGCAGATCTAGTAGTCCTAGATCCCCGGACTCTACCCAACCTTCCACTTCCAGAGATGTTTCCTAG
- Protein Sequence
- MTTKEKQLNGTNNFKNIPGSSKNSSIKCNEHYNQCKEEAFQFKVPPEAPVFYPTEEEFLDPLAYIAKIRPIAENTGICKIKPPGRWQPPFAVDVDKLRFIPRIQRLNELEAKTRVKLNFLDQIAKFWELQGSSLKIPMVERRVLDLYTLHRIVQLEGGFEEVTRQRKWSKVSSRMGYQIGKNVGTILKQHYERLLFPYDVFKEGKTVSIKLENPDDGTEKTDKDYKPHGIVNRMAVKPPSDKNARRSKRFETNDKDKTEIELKIKEEKIDDDGDDKNKELKRLQFYGAGPKMAGYDDKKETKPRSKNVKYEFDPLAKYVCHNCNRGDAEEYMLLCDGCDDSYHTFCLMPPLSEIPKGDWRCPKCVAEEVSKPVEAFGFEQAQREYTLQQFGEMADQFKSDYFNMPVHMVPTNTVEREFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKSSANLFQGDKEYAESSWNLNNLPVLEGSVLGYINADISGMKVPWMYVGMCFATFCWHNEDHWSYSINYLHWGEAKTWYGVPGSKAEAFEDTMKSAAPELFHSQPDLLHQLVTIMNPNILMNAGVPVYRTDQHAGEFVVTFPRAYHAGFNQGYNFAEAVNFAPADWLRMGRECVLHYSHLRRFCVFSHDELVCKMALDNEKLDLTIAAATYQDMLVMVDTEKKLRKALLDWGVTNAEREAFELLPDDERQCEVCKTTCFLSAMTCSCSKTTLVCLRHYKNLCECPPKNRTLRYRYTLDELPVMLKALKLKAESFDHWVAKVKDALDPNTPKTLNLNDLKALLKEADGKKFPKCELLQTLTNAVIDAEKCASVIHQLDLNKMRTRTRHSNEAKYKLTVEELTLFCEEIDSLACVLDEAKSIRVLLEQTQKFESKSEELLRQPLKENVLSELESCQSHGNGLCIELPGLKLIQTRIKQSQWMKDLDNYRLKTEVMGLEVIKNLIQEGCSLPPHSEMERELSNLQLILQQSQEWEEKAAEVLKSEDSGVLIQVDKLLKESSKISCHLPTEDILYDAMKKARDWLRQLDEMNSAEYYPYYSAMEELIKKGRTLALHLVEVDKMNDYLTLANNWKEKTAHAFLRKNSACTLMEALSPRTVLPSSIKNTKKGKNVDDDIKSIALTNTMDPATVVALFKEAEEAEMAMIRKLRQANRQKSLDPNETTTTYCICGRGLFGIMMKCELCQDWFHSTCTQLPKIASTKFKGNFLNICISLGFKDCKYVCPNCQRTKRPRLDVILNLLMSLQKLYVRVPEGEALQCLTERAMNWQDRARNLLKHTELEKAKVKLSLLSQKYTEAAARQRTEKIISTELKRASKNPELQQRVQEITPFSGVNEDGVTCDSGINDSDEGSRESSRDSDDRMGEHAYSLHLPKNDGEDNVIRIHPDIKKQLEELLMEGDLLEVYLDETFALWKLMLASTDPEQDVIIIDFDAHLKNAPKKRGRKRLSDDIIDSTKKSIKSMKADGEKKIRGRKQQSTNKDSAQKKQRSKRRGRRCQSTASNSSDSEDEDCAASGCQRPTGQNVDWVQCDGGCEQWFHMACVGLSAEDINEDEDYICITCSRSTTFESVDTCESRSSSPRSPDSTQPSTSRDVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00386968;
- 90% Identity
- iTF_01238345;
- 80% Identity
- -