Basic Information

Gene Symbol
Kdm5
Assembly
GCA_963969555.1
Location
OZ018384.1:42922692-42929960[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 3.5e-24 3.7e-20 74.3 0.1 2 89 117 200 116 200 0.94
2 2 0.16 1.7e+03 1.6 0.0 31 67 1248 1285 1229 1303 0.75

Sequence Information

Coding Sequence
ATGACGACCAAAGAGAAACAGTTGTTAAATGGAAATAATGGTTTAAAAAGTAATCCTGGAAGTTCAAAAAATTCACCAATTAAATGCAATGAACATTACAGTCAGTGCAAAGAAGAAGCTTTTCAGTTTGAAGTTCCACCAGAAGCCCCAGTGTTTTACCCAACTGATGAAGAATTCATGGACCCTTTGGCTTACATAGCCAAAATTAGACCCATCGCCGAAAATACAGGAATATGTAAAATTAAACCACCAGCAAAGTGGCAGCCTCCATTTGCTGTGGATGTAGATAAATTAAGATTTACACCTAGAATACAAAGGCTTAATGAACTAgagGCCAAAACAagagtaaaattgaattttcttGATCAGATAGCAAAATTCTGGGAGTTGCAGGGGTCCTCCCTAAAAATTCCTATGGTAGAGAGGAGGGTTCTAGATTTATATACTTTACATAGGGTTGTACAATTAGAAGGTGGATTTGACGAGGTCACAAAGCAAAGAAAATGGTCCAAAGTTTCAATTCGGTTGGGTTACCAGATTGGAAAAAACGTTGGCACTATTTTAAAACAACACTATGAAAGACTTTTATTTCCATTTGATGTTTTTAAAGAAGGAAAAAGAGTTTGCATAaaaatcgaGAGTCCCGATGATGGCACTGAAAAAACTGACAAAGACTATAAACCCCATGGTATTGTTAATAGGATGGCGGTTAAGCCACCATCGGATAAAAATGCCCGGCGATCTAAACGATTTGAGGCAAACGACAAGGAAAAGACTGAAatagAACTTAAGATAAAAGAAGAGAAATCAGATGATTTGGATGGTGATGACAAAAACAAAGAATTAAAAAGATTACAGTTTTATGGAGCTGGTCCTAAAATGGCTGGCTACGATGACAAAAAGGAACAAAAGCCTAgatctaaaaatatcaaatacgATTTTGACCCAttggcTAAATATGTGTGTCACAATTGTAATAGAGGTGATGCAGAAGAATACATGTTGCTATGTGATGGCTGCGATGATAGCTATCATACATTTTGTCTGTTACCTCCCTTATCTGAAATACCTAAAGGTGACTGGAGATGCCCAAAATGTGTAGCTGAGGAAGTTTCAAAACCAACTGAGGCTTTTGGTTTTGAACAGGCTCAAAGGGAATACACCTTACAACAGTTTGGAGAAATGGCAGATCAGTTTAAGTCTGATTATTTTAACATGCCAGTTCATGTGGTTCCAACTGGTACAGTAGAGCGAGAATTTTGGCGCATTGTATCGTCCATCGATGAAGATGTTACAGTAGAATATGGTGCTGATCTACACACCATGGACCATGGATCTGGATTTCCTACCAAATCATCTGCAAACCTTTTCCAGTGTGATAAGGAATATGCAGAATCTAGTTGGAACTTAAACAACTTGCCTGTTCTTGAGGGCTCTGTTTTGGGATATATTAATGCTGATATTTCTGGAATGAAGGTACCATGGATGTATGTAGGCATGTGTTTTGCAACATTCTGTTGGCACAATGAAGACCACTGGTCCTATTCAATAAACTATCTTCATTGGGGCGAGGCTAAGACCTGGTATGGAGTTCCTGGTAGTAAAGCTGAAGCATTTGAGGAAACCATGAAATCTGCAGCCCCAGAACTATTTCACTCGCAACCTGATTTGTTACATCAACTAGTGACCATAATGAACCCAAACATCCTTATGAATGCTGGTGTGCCAGTTTACAGAACAGATCAACATGCAGGAGAGTTTGTTGTTACTTTTCCTCGAGCTTACCATGCTGGCTTCAATCAAGGATATAACTTTGCTGAGGCCGTGAACTTTGCCCCAGCTGATTGGTTAAGAATGGGTAGAGAATGTATCCTTCACTATTCACATTTAAGACGATTTTGCGTGTTTTCACATGATGAGCTGGTGTGTAAAATGGCACTCGACAATGATAAACTTGATTTGACCATCGCTGCTGCTACGTATCAGGATATGCTGGTAATGGTTGATACCGAAAAGAAACTACGGAAAACTCTACTTGACTGGGGTGTCACAAATGCAGAACGTGAAGCCTTTGAGTTACTACCAGATGATGAAAGACAATGTGAAGTATGCAAGACCACTTGTTTCTTATCTGCAATGACGTGTTCCTGCTCAACAACCACTTTGGTCTGTTTAAGACACTACAAAAACTTATGTGAATGCCTCCCTAAAAACAGGACATTAAGATATCGTTATACTCTTGATGAGCTACCGGTCATGTTGAAAGCACTTAAACTTAAAGCAGAGTCCTTTGACCATTGGGTTGCGAAAGTTAAAGACGCACTTGATCCAAACACACCTAAAACTCTCAATTTAAGTGACCTAAAGGCACTACTTAGCGAAGCTGATGGAAAGAAATTCCCCAAGTGCGAGCTACTTCAGACACTTACCAGTGCTGTTATAGATGCTGAGAAGTGTGCCAGTGTCATCCACCAACTGGACTTGAATAAAATGCGCACCAGGACTAGGCATTCTAATGAAGCAAAGTATAAGCTGACTGTTGAAGAACTGACCCTCTTTTGTGAAGAAATCGACAGCCTCGCCTGTGTTTTAGATGAAGCTAAAAGTATAAGAGTATTGCTTCAACAAACACAAAAGTTCGAAACTAAAAGTGAGGAACTTTTAGCACAACAATTAAAGGAAAATTCACTTACAGAATTGGAAGCATGTCAGGCTCATGGAAATGGTCTTTGCATAGAGCTGCCTGGTCTAAAGCTGATTAATACCAGAATCAAGCAAGCTCAATGGATGAAAGAAGTTGACAATTATAAGAATAAAACTGATGTGATGGGACTTGAtgctataaaaaatttaatacaagcAGGTTGTTCTTTGCCGCCCCACCCTGAAATGGAAGAGGAGTTATCAAAGCTTCAACTTATACTGCAGCAAGGTCAGGAGTGGGAGGAAAAAGCCCAAGAAGTTCTTAAATCTGAAGATGCCAGTGTGTTAATTGTAGTTGACAAACTTCTTAAGGATGCCGCAAACATTTCCTGTCATTTGCCAACAGAAGGAATTCTTTATGACGCTATGAAGAAGGGCAGGGACTGGTTGAAACAACTTGAAGAGATGAATTCGGCAGAGTACTACCCTTATTATAGTGCCATGGAAGAATTAATCAAGAAAGGACGCCAACTTACACTTCATTTGGTAGAGGCAGATAGAATGAATGACTACCTTATTTTGGCAAATGGTTGGAAAGAAAAGACCAGTCGGTCATTTTTAAGAAAGGACTCTTCTTGTACACTTATGGAGGCTCTATCTCCTAGAACAATTTTACCAAGCAGTATTAAAATTGCCAAGAAAGGTAAAAACGCCGATGATGAATTAAAATCAATAGCATTAACTAACACAATGGATCCAGCCACAGTTGTATCTTTATTTAAGGAAGCTGAAGAAGCAGAAATGTCGATGATAAAAAAACTGAGACAAACTAacaaacttaaaactgtagatcCAAATGACACCACTACAACTTACTGCATTTGTGGAAGAGGCTTGTTTGGTATAATGATGAAGTGTGAGCTTTGTCACGACTGGTTTCACTCCACTTGCTCCCAGCTTCCAAAAATTGCATCTACTAAGTTTAAAGGCAACTTCTTAAATGTTGCTGTTAGCTTAGGATTTAAAGACTGCAAATTTATATGTTCAAATTGTCAAAGAACAAAGAGACCTCGCCTTGACACGATCCTTAGTCTTCTTATGTCCTTGCAGAAACTTTATGTCAGAGTGCCTGAGGGGGAAGCCCTTCAATGCCTCACAGAGAGGGCTATGAACTGGCAAGACAGAGCTAGACAACTATTACAAAATCCGGAACTTGAAAGAGCCAAgattaaattaaattctttaagCCAGAAGTTTACCGAAGCAGCGGCAAGACAGAggactgaaaaaataatttctaccgAGTTGAAACGAGCTTCCAAAAATCCAGAGCTCCACCAAAGGGTACAAGAAATAACTCCATTTAGTGGAGTTAATGAGGACGGCGTCACATGCGATAGTGGCATTAACGATTCAGATGAGGCATCAAGAGAGTCTTCCAGAGACTCTGATGACCGAATGGGCGAACATGCCTACAGTCTTCACCTTCCCAAAAACGATGGCGAAGATTATATGGTAAGGATTCACCCAGACATTAAGAAGCAAATGGAAGACCTCTTAATGGAGGGTGACTTACTGGAAGTTTACCTAGATGAGACTTTTGCCCTGTGGAAGCTGATGCTGGGCTCCAGGGATCACGAACGAGACGTAATGCTTATAGATTTTGACGCGCACCTTAAGGCAGCACCTAAAAAACGCGGCAGAAAACGGCTGTCTGATGATCTCATTGACTCTACAAAGAAATCTATAAAAACCATGAAAGCTGAAGGTGAAAAGAAAATGCGTGGCAGAAAACAACAAACTACTAAGGACAGTACGCAGAAGAAAGCGCGCGGCAAGCGCAGAGGACGTCGTTGTCAGTCTACGGCATCAAATAGCAGTGATAGTGAGGATGAAGATTGTGCAGCAAATGGCTGCCAACGACCAACAGGACAAAATGTAGACTGGGTTCAATGTGATGGTGGATGTGAGCAATGGTTTCATATGGCCTGTGTTGGTTTATCAGCAGAAGATATTAATGAAGATGAAGACTACATTTGTATTACCTGTTCTCGAAGTACTACTTTTGAAACTGCTGACCCGACGTGTGAAAGTCGATCTAGTAGTCCTAGATCCCCGGATTCGACACAACCTTCCACTTCAAAAGACGTTTCCTAG
Protein Sequence
MTTKEKQLLNGNNGLKSNPGSSKNSPIKCNEHYSQCKEEAFQFEVPPEAPVFYPTDEEFMDPLAYIAKIRPIAENTGICKIKPPAKWQPPFAVDVDKLRFTPRIQRLNELEAKTRVKLNFLDQIAKFWELQGSSLKIPMVERRVLDLYTLHRVVQLEGGFDEVTKQRKWSKVSIRLGYQIGKNVGTILKQHYERLLFPFDVFKEGKRVCIKIESPDDGTEKTDKDYKPHGIVNRMAVKPPSDKNARRSKRFEANDKEKTEIELKIKEEKSDDLDGDDKNKELKRLQFYGAGPKMAGYDDKKEQKPRSKNIKYDFDPLAKYVCHNCNRGDAEEYMLLCDGCDDSYHTFCLLPPLSEIPKGDWRCPKCVAEEVSKPTEAFGFEQAQREYTLQQFGEMADQFKSDYFNMPVHVVPTGTVEREFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKSSANLFQCDKEYAESSWNLNNLPVLEGSVLGYINADISGMKVPWMYVGMCFATFCWHNEDHWSYSINYLHWGEAKTWYGVPGSKAEAFEETMKSAAPELFHSQPDLLHQLVTIMNPNILMNAGVPVYRTDQHAGEFVVTFPRAYHAGFNQGYNFAEAVNFAPADWLRMGRECILHYSHLRRFCVFSHDELVCKMALDNDKLDLTIAAATYQDMLVMVDTEKKLRKTLLDWGVTNAEREAFELLPDDERQCEVCKTTCFLSAMTCSCSTTTLVCLRHYKNLCECLPKNRTLRYRYTLDELPVMLKALKLKAESFDHWVAKVKDALDPNTPKTLNLSDLKALLSEADGKKFPKCELLQTLTSAVIDAEKCASVIHQLDLNKMRTRTRHSNEAKYKLTVEELTLFCEEIDSLACVLDEAKSIRVLLQQTQKFETKSEELLAQQLKENSLTELEACQAHGNGLCIELPGLKLINTRIKQAQWMKEVDNYKNKTDVMGLDAIKNLIQAGCSLPPHPEMEEELSKLQLILQQGQEWEEKAQEVLKSEDASVLIVVDKLLKDAANISCHLPTEGILYDAMKKGRDWLKQLEEMNSAEYYPYYSAMEELIKKGRQLTLHLVEADRMNDYLILANGWKEKTSRSFLRKDSSCTLMEALSPRTILPSSIKIAKKGKNADDELKSIALTNTMDPATVVSLFKEAEEAEMSMIKKLRQTNKLKTVDPNDTTTTYCICGRGLFGIMMKCELCHDWFHSTCSQLPKIASTKFKGNFLNVAVSLGFKDCKFICSNCQRTKRPRLDTILSLLMSLQKLYVRVPEGEALQCLTERAMNWQDRARQLLQNPELERAKIKLNSLSQKFTEAAARQRTEKIISTELKRASKNPELHQRVQEITPFSGVNEDGVTCDSGINDSDEASRESSRDSDDRMGEHAYSLHLPKNDGEDYMVRIHPDIKKQMEDLLMEGDLLEVYLDETFALWKLMLGSRDHERDVMLIDFDAHLKAAPKKRGRKRLSDDLIDSTKKSIKTMKAEGEKKMRGRKQQTTKDSTQKKARGKRRGRRCQSTASNSSDSEDEDCAANGCQRPTGQNVDWVQCDGGCEQWFHMACVGLSAEDINEDEDYICITCSRSTTFETADPTCESRSSSPRSPDSTQPSTSKDVS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00386968;
90% Identity
iTF_01238345;
80% Identity
-