Basic Information

Insect: Phormia regina
Gene Symbol: stc
Assembly: GCA_001735585.1
Location: MINJ01167331.1:1255-5830[-]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 3 3.7e+04 -4.3 1.6 15 19 553 557 552 557 0.81

2 14 0.099 1.2e+03 0.6 0.2 4 10 586 592 585 594 0.95

3 14 2.9e-05 0.36 11.9 16.7 1 19 598 615 598 615 0.93

4 14 4.3e-07 0.0053 17.7 13.8 3 19 653 669 651 669 0.91

5 14 2.2 2.7e+04 -3.7 0.6 7 11 673 677 673 677 0.87

6 14 5.4e-05 0.66 11.1 19.6 1 19 709 727 709 727 0.98

7 14 2.6e-05 0.31 12.1 14.4 4 18 775 789 768 790 0.86

8 14 0.012 1.5e+02 3.6 9.3 1 11 830 840 830 841 0.96

9 14 3 3.7e+04 -4.7 1.1 4 10 845 851 845 851 0.58

10 14 8.3e-10 1e-05 26.4 15.5 1 18 857 874 857 875 0.97

11 14 2.9 3.6e+04 -4.1 0.9 6 10 904 908 904 909 0.81

12 14 3 3.7e+04 -7.6 9.7 10 18 922 931 911 932 0.76

13 14 1e-07 0.0012 19.8 14.7 1 16 968 983 968 993 0.92

14 14 7.8e-07 0.0095 16.9 14.0 1 19 1000 1019 1000 1019 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	3	3.7e+04	-4.3	1.6	15	19	553	557	552	557	0.81
2	14	0.099	1.2e+03	0.6	0.2	4	10	586	592	585	594	0.95
3	14	2.9e-05	0.36	11.9	16.7	1	19	598	615	598	615	0.93
4	14	4.3e-07	0.0053	17.7	13.8	3	19	653	669	651	669	0.91
5	14	2.2	2.7e+04	-3.7	0.6	7	11	673	677	673	677	0.87
6	14	5.4e-05	0.66	11.1	19.6	1	19	709	727	709	727	0.98
7	14	2.6e-05	0.31	12.1	14.4	4	18	775	789	768	790	0.86
8	14	0.012	1.5e+02	3.6	9.3	1	11	830	840	830	841	0.96
9	14	3	3.7e+04	-4.7	1.1	4	10	845	851	845	851	0.58
10	14	8.3e-10	1e-05	26.4	15.5	1	18	857	874	857	875	0.97
11	14	2.9	3.6e+04	-4.1	0.9	6	10	904	908	904	909	0.81
12	14	3	3.7e+04	-7.6	9.7	10	18	922	931	911	932	0.76
13	14	1e-07	0.0012	19.8	14.7	1	16	968	983	968	993	0.92
14	14	7.8e-07	0.0095	16.9	14.0	1	19	1000	1019	1000	1019	0.96

Sequence Information

Coding Sequence: atgtcGACAGATTCTAAATCTCAGTCTTCTAACCAACCACCTTTGTCACAACTTTGGCCGGGTTTTGGTTCTACAACATCCGACCTTAGCAATCCTATGGAACACCATCAACATCACCATTCAAGTAATCAGGCTGTAGGCAAACCACCACCTCagccaaataataataataataattatgttaattttaatcaatttataatGCAACATAATCTTGTATCACCTCATCAAACTAAATCGCCCATTTCTACTTCTTTGGAGGAACCTTTTGCCAAAGAAGGTGGTCAAAATTCCAATTATGatgatTATTTTAATCCATCTATACCCCAATATCCGTTTGCCAACTATAATAATCCAATCgccagcaacaataataataacagtgTATTTTCCGATGGTTTACAAAACTACAACATTAATCCCAATACATCCACTGGAatagcatcatcatcatcgacaTCATCTGCAACTGTTAATCAACAGCAATATTATGATGCTCCCAATTCATATAGTAACTTTAATACCAATGGCACTACATATTATGCCAATCCCTTTGCTACAGGTTTTGATTTTACCAATACTAAACTTCAACCTAATGCTCCAGAATTTGTACCCCGATTTGATAAACTTTCGTTGAACGAAATAGCTCAAGAAGCTGAAACACAAAAGGAGAACAAAGCTAAAAATTCGGAAACCCCTAATGATAATTATAACAAACCCAAAGAAGATTATAATAGTAAAGTAGAGGGTGAAAGTAaagataaagagaaaaatatggaTTCTAGTTTTGAAAAGGAGGAGAAAAGACAACAGCAAAGACATGAACGTACGCGTGGTAATAATCGTCATCAAAATAAACATgataaggaaaataataaaagaaataataatcgTTTGGAAAAGAATATGGAaagattttcacgaaatttacAGGAGAAACATCAAAATAATGATTCAGCTTCAAATTCGAATTCTTCCACACCTTCGTTGAGTATAAATGGTAGGGATAGGGAACAGCATCAGCAGCATCAAGGTGTGTCTAAATCGACTGGAGCTTTTAGTAAAAATCATCGTAATTCCTCTAATGGTGGTAGTGGTAATAATGATAAGCAAAGAAATTCCGATAACTCGGACAAAAATGGTGGagataaaaatcaatataataataaacgtTATCAGAATGGACGTCGTTCCCAGGAATTTGGTGAAAGAGAAGATCGTTTTGAACGTTATGTGGAGAGAGGTGAACGCTCTGATCGTGGCCACAATCAGAGAAATCAACAACGCAATGATTACCATCAACGTTATGATAATTATCGTAGCAATAAGAGACGTGATGATTGGAATCGTAATCGTGATCGCATTAATGGTTTTCGTGTGGAGGAGAAATATTCCAATGATAATGGCAAAGATAGCCCTTTGCCCTCACCCGAAAAGAAATCGCCTAAAAAGGCTTAcgataaagaaaatgaaaaactttctCAAAGAGAAAAACTTATAAGAGATATAGAAACTAGACGTTTGGAGTGTTTAGTTTGCGTAGAACCCATTAAAGCTCATCAGGCAGTTTGGTCTTGTCATAATTGCTATCATATTTTGCACTTGCAGTGTATAATAAAATGGGCTTCTTCATCAAAATCGGATGATGGTTGGCGCTGTCCTGCTTGTCAGAATGTTGAAAAAGATGTTCCTCGTGATTATTATTGTTTCTGTGGCAAATTGAAAAATCCTCCCAATAATCGTCAGGATATAGCTCATTCTTGTGGTGAAGTGTGTGGTCGTGTAGAGGGTTGTTCTCATGCTTGTACTTTGCAGTGTCATCCCGGCCCTTGTCCACCTTGTCAGGCTCAAGTTAAACGTGAATGTGGCTGTGGTAAGACTTCGAAAATTATGCAATGCTGCTTAAAAGAAACCATAGAATGTGATTCAACTTgtgaaaaactattaaattgtgAATTGCACACTTGTCAGGAGAAATGTCATGAAGGCAAATGTCCTAACTGTAAGGAGAAGGTGGAACAAAAGTGTCATTGTTCCAAACAGGAACGACAAGTAACTTGTACACGTGAATCGCATGACAAACATAATTACTCGTGTGGCAAACCTTGTGGTAAAGATTTAAGTTGTGGCAATCATAAATGTAAAGACTGTTGTCATCCTAATGAGTGCAAACCATGTAAATTGAGTCCTGATAATGTGACTTCCTGTCCCTGTGGCAAAATGCCTATTGTGCCGGGACAACGGAAATCATGCTTGGATCCCATACCCGTATGTGAGGGTGTTTGTggcaaaactttaaaatgtggCAAAGCTACAAATCCACATCATTGCACCTCCAAATGTCATTTGGGTAATTGTCCCCCTTGCAATAAACAGACCGCTGTCAAATGCCGTTGTGGCCATATGGATCAAATGATTAAGTGCCGCCAATTATCGACACGAGCCGATGATGCTAGATGCAAGAAACGTTGCACGAAAAAACGTTCCTGCGGCAAACACAAGTGTAATCAAGAATGCTGCATAGACATCGACCACTTCTGTCCACTGCCTTGTAATTATACTCTCTCTTGTGGCAAGCACAAGTGTGACCAACCCTGTCATAGGGGCAATTGTCCACCCTGTTATCGTTCCTCCTTTGAAGAACTCTTCTGTGAGTGTGGTGCTGAAGTCATATATCCCCCAGTGCCCTGTGGCACTAAACGTCCCGTCTGCAAACGGCCCTGTTCGCGTAAACATCCCTGCGATCATCCACCACAACATAACTGCCATTCAGCAGCCACTTGCCCTCCCTGTATGATGTTCACCACTAAATGGTGTTTTGGCCAGCATGAGCAACGTAAAACTATACCATGTTCGCAGCAAAGTTTCTCTTGTGGTTTAGCTTGTAACAAACCCTTGCCTTGTGGTCGCCACAAGTGTATTAAGACCTGTCATGAGGGTCCTTGTCAAGTGCCCGGAGAGATATGTAAACAAAGTTGCACTACTGCCCGCTCTACTTGCGGCCACAAATGTATGGCACCTTGTCACAATGGTGACTGCCCCGAGACTCCTTGCAAAGAAATGGTCGAAGTTCAATGTGAATGCGGCAATCGCAAACAAATGCGTACTTGTGCCGAATTAGCACGAGAATTTAGTCGTATTGCTACGGCCCAATTAGCATCCTCTATGGCCGAAATGCAACGTGGCAATTATATGGAACTATCTGAAATTTTAGCTCCCGTTAAACTCTCTAGTAAATCGAATAAAACTTTGGATTGTAACGAAGAATGTCGTCTACTCGAACGTAATCGTCGTTTGGCTATAGGCCTGCAAATACGTAATCCTGATTTGccacaaaaacttttaacaaaatattctgattttatacgaaattttgcCAAACGTGATCCGGCTTTGGTGAAATCCATACACGAAGCTTTGACCACACTAGTGAAATTGGCCAaagaaagtaaacaaaaatcacGCTCACATTCTTTTCCCACCATGAATCGTGAAAAACGTCAGTTGGTACATGAAATGTGTGAAATGTTTGGTGTAGAATCAGTGGCCTATGATGCGGAACCGAATCGTAATGTGGTAGCTACAGCTTATAAGGATagaTCTTGGCTTCCTGCTACTAGTATTATGGAAGTAATGGCTCGTGAAGCTGGTCAAAGACGTGTACCAGTACCGAGTAATAATGCCTGGGGCTTAAAGAGATAA
Protein Sequence: MSTDSKSQSSNQPPLSQLWPGFGSTTSDLSNPMEHHQHHHSSNQAVGKPPPQPNNNNNNYVNFNQFIMQHNLVSPHQTKSPISTSLEEPFAKEGGQNSNYDDYFNPSIPQYPFANYNNPIASNNNNNSVFSDGLQNYNINPNTSTGIASSSSTSSATVNQQQYYDAPNSYSNFNTNGTTYYANPFATGFDFTNTKLQPNAPEFVPRFDKLSLNEIAQEAETQKENKAKNSETPNDNYNKPKEDYNSKVEGESKDKEKNMDSSFEKEEKRQQQRHERTRGNNRHQNKHDKENNKRNNNRLEKNMERFSRNLQEKHQNNDSASNSNSSTPSLSINGRDREQHQQHQGVSKSTGAFSKNHRNSSNGGSGNNDKQRNSDNSDKNGGDKNQYNNKRYQNGRRSQEFGEREDRFERYVERGERSDRGHNQRNQQRNDYHQRYDNYRSNKRRDDWNRNRDRINGFRVEEKYSNDNGKDSPLPSPEKKSPKKAYDKENEKLSQREKLIRDIETRRLECLVCVEPIKAHQAVWSCHNCYHILHLQCIIKWASSSKSDDGWRCPACQNVEKDVPRDYYCFCGKLKNPPNNRQDIAHSCGEVCGRVEGCSHACTLQCHPGPCPPCQAQVKRECGCGKTSKIMQCCLKETIECDSTCEKLLNCELHTCQEKCHEGKCPNCKEKVEQKCHCSKQERQVTCTRESHDKHNYSCGKPCGKDLSCGNHKCKDCCHPNECKPCKLSPDNVTSCPCGKMPIVPGQRKSCLDPIPVCEGVCGKTLKCGKATNPHHCTSKCHLGNCPPCNKQTAVKCRCGHMDQMIKCRQLSTRADDARCKKRCTKKRSCGKHKCNQECCIDIDHFCPLPCNYTLSCGKHKCDQPCHRGNCPPCYRSSFEELFCECGAEVIYPPVPCGTKRPVCKRPCSRKHPCDHPPQHNCHSAATCPPCMMFTTKWCFGQHEQRKTIPCSQQSFSCGLACNKPLPCGRHKCIKTCHEGPCQVPGEICKQSCTTARSTCGHKCMAPCHNGDCPETPCKEMVEVQCECGNRKQMRTCAELAREFSRIATAQLASSMAEMQRGNYMELSEILAPVKLSSKSNKTLDCNEECRLLERNRRLAIGLQIRNPDLPQKLLTKYSDFIRNFAKRDPALVKSIHEALTTLVKLAKESKQKSRSHSFPTMNREKRQLVHEMCEMFGVESVAYDAEPNRNVVATAYKDRSWLPATSIMEVMAREAGQRRVPVPSNNAWGLKR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00260356; iTF_01238242; iTF_00332019; iTF_00921782; iTF_01236342; iTF_01237338; iTF_00259456; iTF_01427974; iTF_00893543; iTF_01314350; iTF_01316013; iTF_00200436; iTF_01259764; iTF_01374650; iTF_00350686; iTF_00655774; iTF_01377154;
90% Identity: iTF_01261574; iTF_01259764;
80% Identity: -