Basic Information

Insect: Sarcophaga carnaria
Gene Symbol: stc
Assembly: GCA_958299815.1
Location: OY283152.1:105731806-105736549[-]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 2 3.8e+04 -4.4 1.6 15 19 606 610 605 610 0.81

2 13 0.071 1.3e+03 0.5 0.2 4 10 639 645 638 646 0.95

3 13 0.00017 3.3 8.9 17.8 4 19 653 668 651 668 0.93

4 13 7.6e-08 0.0014 19.6 15.8 3 19 706 722 704 722 0.91

5 13 2.5e-07 0.0047 17.9 20.4 1 19 762 780 762 780 0.98

6 13 1.8e-05 0.34 12.0 14.4 4 18 828 842 821 843 0.86

7 13 0.0083 1.6e+02 3.5 9.3 1 11 883 893 883 894 0.96

8 13 2 3.8e+04 -4.7 1.1 4 10 898 904 898 904 0.58

9 13 5.8e-10 1.1e-05 26.4 15.5 1 18 910 927 910 928 0.97

10 13 2 3.8e+04 -4.1 0.9 6 10 957 961 957 962 0.81

11 13 2 3.8e+04 -8.5 10.5 10 18 975 984 964 985 0.76

12 13 8.6e-08 0.0016 19.4 15.1 1 17 1021 1037 1021 1046 0.93

13 13 3.4e-07 0.0064 17.5 13.3 1 19 1053 1072 1053 1072 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	2	3.8e+04	-4.4	1.6	15	19	606	610	605	610	0.81
2	13	0.071	1.3e+03	0.5	0.2	4	10	639	645	638	646	0.95
3	13	0.00017	3.3	8.9	17.8	4	19	653	668	651	668	0.93
4	13	7.6e-08	0.0014	19.6	15.8	3	19	706	722	704	722	0.91
5	13	2.5e-07	0.0047	17.9	20.4	1	19	762	780	762	780	0.98
6	13	1.8e-05	0.34	12.0	14.4	4	18	828	842	821	843	0.86
7	13	0.0083	1.6e+02	3.5	9.3	1	11	883	893	883	894	0.96
8	13	2	3.8e+04	-4.7	1.1	4	10	898	904	898	904	0.58
9	13	5.8e-10	1.1e-05	26.4	15.5	1	18	910	927	910	928	0.97
10	13	2	3.8e+04	-4.1	0.9	6	10	957	961	957	962	0.81
11	13	2	3.8e+04	-8.5	10.5	10	18	975	984	964	985	0.76
12	13	8.6e-08	0.0016	19.4	15.1	1	17	1021	1037	1021	1046	0.93
13	13	3.4e-07	0.0064	17.5	13.3	1	19	1053	1072	1053	1072	0.97

Sequence Information

Coding Sequence: ATGTCTGCAGATTCGAAGCCTCATTCTACTGCTCAGCCACCACTATCACAGCTGTGGCCGGGTTTTGGTACAACAACATCTGATACCATAATTATGGGCTCCCCTTTggagcaacagcagcagcagcaacataaGTCTATCAATATGactaagcaacaacaacaacagcagcaacagaataacaacagcaactatgtgaattttaatcaatttataaTGCAGCATAATCTTGCACCACCTCAACAAATTAAACCTCAATTGACATCTTCATCAATGGATCGTGAGACAATCATTGTTAGTGAATTTGATGAAGTTTCTGATTATATTCATAATATTGGTGGTGccctaaataataataataaaagtgctAAAGCCAATGACAACAGCACCAATACGAATTATcgccagcaacaacaacaacaatacaattaTTTCAATCCATCTATGTCACAGTTTCCGTTTCCAAACTATAATCAAGTTCCCAGTAATACTAACAGTGTATTTTCGGAGGGTTTacgaaatttcaatataaaccCAAATGCATCTGTAATGCccgacacaacaacaacaacatcatcatcgacGAATAATCAAAGTTATTACGACACAGGAAATTCGTATAGTAATTTTAGTACAAATGGTACAACTTATTACGCAAATCCCTTTGCCACTGGATTTGATTTTACCAACACAAAACTGCAAGCAACCGCTGCCGAATTTGTGCCCCGATTAAATAAGCTTTCGTTAAATGAAACTGCAACAGAAGCAAGTCAGCAAACTAAAGAGGGTATTGCAACTAATACAGAAACCCATAGAGAGAACAATACTACACCCTTAGACTCTATGAGGGCAGTCGAAGTGATTGGTGACGCTAAAGACAATGAGAAAAATTTAGAgtctatttttgaaaaagaggaaaaaagacAGCAGCGTCATGAACGTAACAGGGGAAATAATCGTCATCAGAATAAACATGACAAGGAgaataataaacgaaataataatcGTATGGAAAAGAATATGGAAAGGTTTTCAAGAAACTTACAagagaaaaatcaaaataatgatTCGGCTTCAAATTCGAATTCGTCAACACCCTCGTTGACTATGAACAACAGCAGagatcagcagcagcagcagcaacaaccgGGATCTTCAAAATCATCAGGAGCTTTTAGTAAAAACAGTCGCAATGGTAATGGTAATGGTAATGGTAGTAATGGTAATAATAATGGAAATGGCGATAAGCCAAGAAATAATGAAGCACAAACacagaataataataacaataacaataacaagggGGATAAAAACAATGCCAATAAACGTTATCAAAATGGCAGGCGTTCACAGGACTTTTCTGAACGTGAAGATCGTTATGAACGTTACGTAGAACGTGGTGAACGTTCGGATCGGGGTCACAATCAACGCAATCAACAGCAGCGTAATGACTATCATCAACGTTACGACAATTATCGCAGCAATAAAAGACGTGATGATTGGAATCGTAATCGTGATCGCATTAATGGTTTTCGTGTagaggaaaaatatgacaatgaTAATGGCAAAGACAGTCCTTTGCCCTCGCCCGAAAAGAAATCACCCAAAAAGATATACGAAAAGGAGAATGAAAAACTCTCACAGCGAGAGAAACTTATCAGAGACATAGAAACCAGACGTCTGGAATGTTTGGTTTGTGTAGAGCCCATTAAAGCTCATCAGGGTGTTTGGTCCTGTCATAATTGTTATCACATACTCCACTTGCAATGCATAATAAAATGGGCCTCTTCCTCGAAATCAGATGATGGCTGGCGTTGTCCAGCTTGTCAAAATGTCGAAAAAGATGTTCCTCGTGATTACTATTGCTTCTGTGGTAAATTGAAAAATCCTACAAATAATCGTCAGGATATAGCACACTCTTGTGGTGAAGTTTGTGGCCGTATAGAGGGTTGTCCTCATGCCTGTACGTTACAGTGTCACCCCGGTCCTTGCCCTCCATGCCAAGCTCAAGTCAAGCGTGAATGTGGTTGTGGTAAAACATCCAAGATAATGCAATGCTGTGTAAAGGAAATCATTGAATGCGATTCCACCTGTGAGAAGCTATTGAACTGTGAATCACACACATGTCAGGAAAAATGTCACGAAGGCAAGTGTCCTCCGTGCAAAGAGAAAGTTGATCAAAAATGCCACTGTTCTAAACAAGAACGCCAAGTAACTTGCACACGTGAGTCGCACGATAAACACAATTATTCGTGTGGCAAACCTTGCGGTAAAGATCTATCCTGTGGCAATCATAAATGTAAGGATTGTTGTCATCCCGGTGAGTGTAGACCTTGTAAATTGAGTCCTGATTTTGTAACTTCCTGTCCATGTGGCAAAATGCCTATAATAGCGGGTCAACGCGTATCATGTTTGGATCCCATACCCGTGTGTGAAGGTGTATGCGGCAAGACTTTGAAATGTGGCAAGGCCACCAATCCCCATCACTGTACTTCCAAATGCCATTTGGGTAATTGTCCACCATGTAATAAACAAACAGCCGTTAAATGCCGCTGTGGCCACATGGATCAAATGATTAAATGTCGTCAGCTGTCAACCAGAGCCGATGATGCCAGATGCAAAAAGCGCTGCACGAAAAAACGTTCCTGTGGCAAACACAAATGTAATCAAGAATGCTGCATAGACATCGATCACTTCTGTCCACTGCCTTGTAATTATACGCTCTCTTGTGGTAAGCATAAGTGTGATCAGCCTTGTCATCGCGGTAATTGTCCGCCCTGCTATCGTTCCTCTTTCGAAGAACTTTTCTGTGAATGTGGTGCTGAGGTAATTTATCCACCTGTGCCATGTGGCACTAAGCGTCCAGTTTGCAAGCGTCCCTGTTCGCGTAAGCACCCTTGTGATCATCCACCTCAACATAACTGTCATTCGGCTGCCACTTGTCCTCCTTGTATGATGTTCACTACGAAATGGTGTTTTGGCCAGCATGAACAACGTAAAACCATTCCGTGCTCTCAGCAGAGTTTCTCATGTGGTTTGGCTTGCAATAAGCCACTACCTTGTGGGCGACACAAGTGCATAAAGACTTGCCATGAGGGGCCTTGTCAAACGCCCGGCGAAATTTGCaaacaaagctgtactacaccACGTTCCACTTGCGGTCACAAATGCATGGCTCCCTGTCATAACGGCGACTGTCCAGATTCACCTTGTAAGGAAATGgTTGAAGTTCAATGTGAATGTGGAAATCGCAAACAAATGCGTACTTGTGCTGAATTGGCTAGAGAATTTAGCCGCATTGCTACTGCTCAGCTGGCTTCCTCCATGGCTGAAATGCAACGTGGCAATTATATGGAACTTTCGGAAATTCTGGCTCCTGTCAAACTATCGAACAAATCCAATAAAACTTTGGATTGCAGTGAAGAATGCCGTCTACTCGAACGCAATCGTCGTTTGGCTATTGGTTTGCAAATACGTAATCCTGATTTGCCACAAAAACTTCTTACAAAATATTcagattttataaaaagttttgccAAACGTGACCCAGCTTTGGTAAAGTCTGTACATGATGCTCTAACCACACTGGTTAAATTGGCGAaggaaagtaaacaaaaatcacgATCCCATTCATTTCCCACTATGAATCGCGAAAAGAGGCAATTGGTACATGAGATGTGTGAAATGTTTGGTGTTGAATCGGTGGCCTATGATGCTGAGCCAAATCGTAATGTGGTCGCTACGGCATTTAAAGATCGCTCCTGGCTTCCTGCTACAAGTATTATGGAAGTAATGGCTCGTGAGTCTGGTCAACGTCGTGTACCAGTGCCCAGCAACAATGCCTGGGGCCTAAAGAGATAA
Protein Sequence: MSADSKPHSTAQPPLSQLWPGFGTTTSDTIIMGSPLEQQQQQQHKSINMTKQQQQQQQQNNNSNYVNFNQFIMQHNLAPPQQIKPQLTSSSMDRETIIVSEFDEVSDYIHNIGGALNNNNKSAKANDNSTNTNYRQQQQQQYNYFNPSMSQFPFPNYNQVPSNTNSVFSEGLRNFNINPNASVMPDTTTTTSSSTNNQSYYDTGNSYSNFSTNGTTYYANPFATGFDFTNTKLQATAAEFVPRLNKLSLNETATEASQQTKEGIATNTETHRENNTTPLDSMRAVEVIGDAKDNEKNLESIFEKEEKRQQRHERNRGNNRHQNKHDKENNKRNNNRMEKNMERFSRNLQEKNQNNDSASNSNSSTPSLTMNNSRDQQQQQQQPGSSKSSGAFSKNSRNGNGNGNGSNGNNNGNGDKPRNNEAQTQNNNNNNNNKGDKNNANKRYQNGRRSQDFSEREDRYERYVERGERSDRGHNQRNQQQRNDYHQRYDNYRSNKRRDDWNRNRDRINGFRVEEKYDNDNGKDSPLPSPEKKSPKKIYEKENEKLSQREKLIRDIETRRLECLVCVEPIKAHQGVWSCHNCYHILHLQCIIKWASSSKSDDGWRCPACQNVEKDVPRDYYCFCGKLKNPTNNRQDIAHSCGEVCGRIEGCPHACTLQCHPGPCPPCQAQVKRECGCGKTSKIMQCCVKEIIECDSTCEKLLNCESHTCQEKCHEGKCPPCKEKVDQKCHCSKQERQVTCTRESHDKHNYSCGKPCGKDLSCGNHKCKDCCHPGECRPCKLSPDFVTSCPCGKMPIIAGQRVSCLDPIPVCEGVCGKTLKCGKATNPHHCTSKCHLGNCPPCNKQTAVKCRCGHMDQMIKCRQLSTRADDARCKKRCTKKRSCGKHKCNQECCIDIDHFCPLPCNYTLSCGKHKCDQPCHRGNCPPCYRSSFEELFCECGAEVIYPPVPCGTKRPVCKRPCSRKHPCDHPPQHNCHSAATCPPCMMFTTKWCFGQHEQRKTIPCSQQSFSCGLACNKPLPCGRHKCIKTCHEGPCQTPGEICKQSCTTPRSTCGHKCMAPCHNGDCPDSPCKEMVEVQCECGNRKQMRTCAELAREFSRIATAQLASSMAEMQRGNYMELSEILAPVKLSNKSNKTLDCSEECRLLERNRRLAIGLQIRNPDLPQKLLTKYSDFIKSFAKRDPALVKSVHDALTTLVKLAKESKQKSRSHSFPTMNREKRQLVHEMCEMFGVESVAYDAEPNRNVVATAFKDRSWLPATSIMEVMARESGQRRVPVPSNNAWGLKR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01194961;
90% Identity: iTF_01316013;
80% Identity: -