Basic Information

Insect: Cochliomyia hominivorax
Gene Symbol: stc
Assembly: GCA_004302925.1
Location: PYHX01002818.1:9890-18097[-]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 2 1.7e+04 -4.4 1.6 15 19 594 598 593 598 0.81

2 13 0.068 5.8e+02 0.6 0.2 4 10 627 633 626 635 0.95

3 13 2e-05 0.17 11.9 16.7 1 19 639 656 639 656 0.93

4 13 1.7e-07 0.0014 18.5 14.0 3 19 694 710 692 710 0.91

5 13 2.8e-07 0.0024 17.8 20.8 1 19 750 768 750 768 0.98

6 13 1.8e-05 0.15 12.0 14.4 4 18 816 830 809 831 0.86

7 13 0.0083 70 3.5 9.3 1 11 871 881 871 882 0.96

8 13 2 1.7e+04 -4.7 1.1 4 10 886 892 886 892 0.58

9 13 5.8e-10 4.9e-06 26.4 15.5 1 18 898 915 898 916 0.97

10 13 2 1.7e+04 -4.1 0.9 6 10 945 949 945 950 0.81

11 13 2 1.7e+04 -7.7 9.7 10 18 963 972 952 973 0.76

12 13 9.4e-09 8e-05 22.5 11.5 1 16 1009 1024 1009 1031 0.92

13 13 5.4e-07 0.0045 16.9 14.0 1 19 1041 1060 1041 1060 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	2	1.7e+04	-4.4	1.6	15	19	594	598	593	598	0.81
2	13	0.068	5.8e+02	0.6	0.2	4	10	627	633	626	635	0.95
3	13	2e-05	0.17	11.9	16.7	1	19	639	656	639	656	0.93
4	13	1.7e-07	0.0014	18.5	14.0	3	19	694	710	692	710	0.91
5	13	2.8e-07	0.0024	17.8	20.8	1	19	750	768	750	768	0.98
6	13	1.8e-05	0.15	12.0	14.4	4	18	816	830	809	831	0.86
7	13	0.0083	70	3.5	9.3	1	11	871	881	871	882	0.96
8	13	2	1.7e+04	-4.7	1.1	4	10	886	892	886	892	0.58
9	13	5.8e-10	4.9e-06	26.4	15.5	1	18	898	915	898	916	0.97
10	13	2	1.7e+04	-4.1	0.9	6	10	945	949	945	950	0.81
11	13	2	1.7e+04	-7.7	9.7	10	18	963	972	952	973	0.76
12	13	9.4e-09	8e-05	22.5	11.5	1	16	1009	1024	1009	1031	0.92
13	13	5.4e-07	0.0045	16.9	14.0	1	19	1041	1060	1041	1060	0.96

Sequence Information

Coding Sequence: atGTCGACGGATTCTAAATCTTCTTCTCAACCACCTTTGTCACAACTTTGGCCGGGTTTTGGTTCTACAGCATCCGACCTTAGTAATCCCATGGAACTTCATCATCAGCAACTACAACATCACTCTATTGGTAATTCGTCAATAGGCAAGCAATCTGCTCAAtcgaataacaacaataattatgtGAATTTCAATCAATTCATAATGCAACATAATCTTGCTTCAACGCATCAAACAAACTCACCCATTTCTTCTAATTCGGGTGAATCCGTTGTAAAAGATGGTGGTACTGGTggtgaaaattctaattatgatgatgtttttaattttatacataatatGGGTAatctaaaaaacaataacaacaataatgtcaAAGGCATTAATGAACAtcaccaacaacagcaacaacaatttaaacaacaatataATTACTTCAATCCATCTCTTGGTTCATATCCATTTGCTAACTTTAATAATCAAATtgtaagcaacaacaacaataataataacagtgTATTTTCCgatagttttcaaaattataatattaattccaATGCCTCAACATCAACATCAATGAATCAACATTTCTACGATAATTCAAATTCATATGGTGGTAATTTCCATACAAATGGCACAACATATTATGCCAATCCATTTGCTACGGGCTTTGATTTTTCCAATACTAAATTACAAGCTAATGCTCCTGAATTTGTACCCAGATTTGATAAACTTTCGTTGAACGAAACATCTCAAGAAACTGAAACACAAAAGGAGAATATAGATAAAAACTCTGagaatataaatgttaatagtaataaacccaaagaagattttagtaaaatagaAAGTGAAATGAATGTCAAAGAAAAGAATATGGATTCTAGTTTTGAAAAAGAGGAGAAAAGGCAACAGCAAAGACATGAACGTACGCGTGGTAATAATCGCTATCAAAATAAACACGataaagagaataataaaagaaacaataatCGTTTAGAAAAGAATATGGAaagattttctagaaatttacaagagaaaaatcaaaataatgattctgcatcaaattcaaattcttccACACCTTCATTATACATGAATGGCAGGGATAAGgatcaacagcagcagcagcaaacaAGTGTTGCTAAATCCACGGGagcttttagtaaaaatcatCAATCTAATCATAAAAATGACAGTGGTAATGGATGTCAGCCCAGAAATGGTACTGATAATTCTGAGAAAATTACTGgagataaaaatcaatttaataataacaacaacaataacaaacgtTATCAAAATGGTAGACGTTCTCAGGAGTTTGGAGAAAGAGAAGATCGTTTTGATCGTTATATAGAACGTGGTGAACGTTCGGATCGAGGCCACAATCAACGTAATCAACAACGCAATGATTATCATCAACGTTATGATAATTATCGCAGTAGCAAAAGACGTGATGATTGGAATCGTAATCGTGATCGTATTAATGGTTTTCGTGTAGAGGAAAAATATTCCAATGATAATGGCAAAGATAGTCCTTTGCCTTCGCCTGAAAAGAAATCACCTAAAAAGACTTATGATAAAGAGAATGAAAAACTCTCTCAAAGAGAAAAACTTATACGCGATATAGAAACTAGACGTCTGGAATGTTTAGTTTGCGTAGAGCCCATTAAAGCTCATCAAAGTGTTTGGTCTTGTCATAATTGCTATCATATTTTGCACCTACAGTGCATTATAAAATGGGCTTCTTCCTCAAAATCGGATGATGGTTGGCGTTGTCCTGCCTGTCAGAATGTGGAAAAAGATGTTCCTCgtgattattattgtttttgtggcAAATTGAAAAATCCTCCCAATAATCGTCAGGATATCGCACATTCTTGTGGTGAAGTATGTGGTCGTGTTGAGGGTTGTTCTCATGCCTGTACTTTGCAATGTCATCCTGGTCCCTGTCCTCCATGTCAGGCTCAAGTTAAGCGTGAGTGTGGCTGTGGTAAGACTTCGAAAATTATGCAATGCTGCATAAAAGAAGCCATAGAATGTGATTCAGTTTgtgagaaattattaaattgtgaATTGCATACTTGTCAAGAGAAATGTCATGAGGGTAAATGTCCAACTTGTAAGGAGAAAGTTGATCAAAAATGTCATTGTTCCAAGCACGAGCGTCAGGTCACCTGTACTCGAGAGTCACATGACAAACATAACTATTCTTGTGGTAAACCTTGTGGCAAGGATTTGAGCTGTGGCAATCATAAATGTAAAGACTGTTGTCATCCTGGCGAATGTAAACCTTGTAAATTGAGCCCTGAGAATGTGACATCTTGTCCCTGTGGCAAAATGCCTATTGTGCCAGAACAACGTAAATCATGCATGGATCCTATACCAGTTTGTGAGGGTGTTTGTGGCAAGACTTTGAAATGTGGCAAAGCTACTAATCCCCATCATTGTACATCTAAATGTCATTTAGGTAATTGTCCTCCTTGCAACAAACAAACTGCTGTCAAATGTCGTTGTGGTCATATGGATCAAATGATTAAGTGTCGCCAACTATCAACAAGAGCTGATGATGCTAGATGCAAAAAACGCTGTACAAAGAAACGATCGTGCGGCAAACACAAGTGTAATCAAGAATGCTGTATTGATATCGATCACTTCTGCCCACTGCCTTGTAATTATACGCTCTCTTGTGGTAAGCACAAGTGTGACCAACCCTGTCATAGGGGTAATTGTCCGCCCTGCTATCGTTCCTCCTTTGAAGAACTCTTCTGTGAATGTGGTGCTGAAGTTATCTATCCTCCAGTGCCCTGTGGCACTAAACGTCCTGTTTGCAAAAGACCCTGTTCGCGTAAACATCCTTGCGATCATCCGCCACAACATAACTGCCATTCAGCAGCCACTTGTCCACCTTGTATGATGTTCACAACCAAATGGTGTTTCGGACAGCATGAGCAACGTAAAACTATACCATGTTCTCAGCAAAGTTTCTCGTGTGGTTTGCCTTGTAATAAGCCACTGCCATGTGGTCGccataaatgtattaaaacatGTCATGAGGGACCGTGTCAGGCTTCAGGAGAGATTTGCAAACAAAACTGTACAACTGCTCGTTCCACATGCGGTCACAAATGTATGGCACCTTGTCACAATGGCGATTGTCCAGAGACTCCCTGTAAGGAAAtggTTGAAGTCCAATGCGAATGTGGTAATCGCAAACAATTGCGTACTTGTGCCGAATTGGCTCGTGAATTTAGTCGTATTGCCACTGCCCAATTGGCCTCATCTATGGCTGAAATGCAACGTGGCAATTATATGGAACTATCAGAAATTTTAGCTCCCGTTAAACTCTccaataaatctaataaaactCTAGATTGCAACGAAGAGTGTCGTCTACTCGAGCGTAATCGTCGCTTAGCCATTGGCCTCCAAATACGTAATCCTGATTTgccacaaaaattattaacaaaatattcagattttatacgaaattttgcTAAACGTGATCCAGCTTTGGTTAAATCTATACACGAGGCATTGACCACACTAGTAAAATTGGCTAAAGAAAGTAAACAGAAATCACGATCACATTCTTTTCCCACCATGAATCGTGAAAAGAGACAATTGGTCCATGAAATGTGTGAAATGTTTGGTGTAGAATCAGTTGCCTATGATGCTGAACCTAATCGTAATGTGGTAGCTACTGCTTATAAGGATAGAtCTTGGCTTCCTGCTACTAGTATTATGGAAGTAATGGCTCGGGAGGCTGGTCAAAGACGTGTACCAGTACCGAGTAATAATGCCTGGGGTCTAAAGAGATAA
Protein Sequence: MSTDSKSSSQPPLSQLWPGFGSTASDLSNPMELHHQQLQHHSIGNSSIGKQSAQSNNNNNYVNFNQFIMQHNLASTHQTNSPISSNSGESVVKDGGTGGENSNYDDVFNFIHNMGNLKNNNNNNVKGINEHHQQQQQQFKQQYNYFNPSLGSYPFANFNNQIVSNNNNNNNSVFSDSFQNYNINSNASTSTSMNQHFYDNSNSYGGNFHTNGTTYYANPFATGFDFSNTKLQANAPEFVPRFDKLSLNETSQETETQKENIDKNSENINVNSNKPKEDFSKIESEMNVKEKNMDSSFEKEEKRQQQRHERTRGNNRYQNKHDKENNKRNNNRLEKNMERFSRNLQEKNQNNDSASNSNSSTPSLYMNGRDKDQQQQQQTSVAKSTGAFSKNHQSNHKNDSGNGCQPRNGTDNSEKITGDKNQFNNNNNNNKRYQNGRRSQEFGEREDRFDRYIERGERSDRGHNQRNQQRNDYHQRYDNYRSSKRRDDWNRNRDRINGFRVEEKYSNDNGKDSPLPSPEKKSPKKTYDKENEKLSQREKLIRDIETRRLECLVCVEPIKAHQSVWSCHNCYHILHLQCIIKWASSSKSDDGWRCPACQNVEKDVPRDYYCFCGKLKNPPNNRQDIAHSCGEVCGRVEGCSHACTLQCHPGPCPPCQAQVKRECGCGKTSKIMQCCIKEAIECDSVCEKLLNCELHTCQEKCHEGKCPTCKEKVDQKCHCSKHERQVTCTRESHDKHNYSCGKPCGKDLSCGNHKCKDCCHPGECKPCKLSPENVTSCPCGKMPIVPEQRKSCMDPIPVCEGVCGKTLKCGKATNPHHCTSKCHLGNCPPCNKQTAVKCRCGHMDQMIKCRQLSTRADDARCKKRCTKKRSCGKHKCNQECCIDIDHFCPLPCNYTLSCGKHKCDQPCHRGNCPPCYRSSFEELFCECGAEVIYPPVPCGTKRPVCKRPCSRKHPCDHPPQHNCHSAATCPPCMMFTTKWCFGQHEQRKTIPCSQQSFSCGLPCNKPLPCGRHKCIKTCHEGPCQASGEICKQNCTTARSTCGHKCMAPCHNGDCPETPCKEMVEVQCECGNRKQLRTCAELAREFSRIATAQLASSMAEMQRGNYMELSEILAPVKLSNKSNKTLDCNEECRLLERNRRLAIGLQIRNPDLPQKLLTKYSDFIRNFAKRDPALVKSIHEALTTLVKLAKESKQKSRSHSFPTMNREKRQLVHEMCEMFGVESVAYDAEPNRNVVATAYKDRSWLPATSIMEVMAREAGQRRVPVPSNNAWGLKR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01194961;
90% Identity: -
80% Identity: -