Basic Information

Insect: Calliphora vicina
Gene Symbol: stc
Assembly: GCA_958450345.1
Location: OY288233.1:109393290-109400581[+]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 2 3.6e+04 -4.4 1.6 15 19 622 626 621 626 0.81

2 13 0.07 1.2e+03 0.5 0.2 4 10 655 661 654 663 0.95

3 13 2.1e-05 0.37 11.8 16.7 1 19 667 684 667 684 0.93

4 13 2.6e-07 0.0046 17.9 12.8 3 19 722 738 720 738 0.91

5 13 3.4e-05 0.6 11.1 19.3 1 19 778 796 778 796 0.98

6 13 1.8e-05 0.32 12.0 14.4 4 18 844 858 837 859 0.86

7 13 0.0085 1.5e+02 3.5 9.3 1 11 899 909 899 910 0.96

8 13 2 3.6e+04 -4.8 1.1 4 10 914 920 914 920 0.58

9 13 5.9e-10 1.1e-05 26.3 15.5 1 18 926 943 926 944 0.97

10 13 2 3.6e+04 -4.2 0.9 6 10 973 977 973 978 0.81

11 13 2 3.6e+04 -7.4 9.4 10 18 991 1000 980 1001 0.77

12 13 7.2e-08 0.0013 19.7 14.7 1 16 1037 1052 1037 1062 0.92

13 13 5.9e-07 0.011 16.8 14.5 1 19 1069 1088 1069 1088 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	2	3.6e+04	-4.4	1.6	15	19	622	626	621	626	0.81
2	13	0.07	1.2e+03	0.5	0.2	4	10	655	661	654	663	0.95
3	13	2.1e-05	0.37	11.8	16.7	1	19	667	684	667	684	0.93
4	13	2.6e-07	0.0046	17.9	12.8	3	19	722	738	720	738	0.91
5	13	3.4e-05	0.6	11.1	19.3	1	19	778	796	778	796	0.98
6	13	1.8e-05	0.32	12.0	14.4	4	18	844	858	837	859	0.86
7	13	0.0085	1.5e+02	3.5	9.3	1	11	899	909	899	910	0.96
8	13	2	3.6e+04	-4.8	1.1	4	10	914	920	914	920	0.58
9	13	5.9e-10	1.1e-05	26.3	15.5	1	18	926	943	926	944	0.97
10	13	2	3.6e+04	-4.2	0.9	6	10	973	977	973	978	0.81
11	13	2	3.6e+04	-7.4	9.4	10	18	991	1000	980	1001	0.77
12	13	7.2e-08	0.0013	19.7	14.7	1	16	1037	1052	1037	1062	0.92
13	13	5.9e-07	0.011	16.8	14.5	1	19	1069	1088	1069	1088	0.96

Sequence Information

Coding Sequence: ATGTCGGCCGACTCAAAGTCACAGTCATCTTCCCAACCACCTTTGTCCCAACTTTGGCCGGGGTTTGGTTCTACATCTAACGATCTTAGTAACCCGCTGGAACATCATCAGCATCACCCAACCAATCAAACTCCGACACAATCTTTGTCTATGAGTTTGCCtaaacatcatcatcagcagccaACGAATATCAATAATAATTATgtgaattttaatcaatttataATGCAACATAACTTGAAATCGCCTCATCAAACTAAATCACCCTTGTCATCATCTCTCGATGATAAATTTACAAAAGTAGAGGGTCAAAATTCCAAATACGATGACGTTTTCAGTTTTATTCAGAATATGGAGGGCatgtataataacaacaatgttAATGCTAAAGGCAGCAACAATAATGCCATTAGTGGAAGTAGCAATGTCACCAATAATGGTGGCAGCACCAATTCTAATCATCAGCAACAAACACAGCAGCTCAAACATCAACAATATAATtACTTTGATCCCACACTACCCCAATATCCATTTGCCAACTATAATAATCAAATTTCCAACAACAACAGTGTATTTTCGGATGGTTTTCAACAATACAATATTAATCCTAACACTGGTCCTGGTATATCAACATCAGCCGCCATCAAAACATCATCAACAGCATCTTCAACGGCAAATCCAAATGTTTATGATAATACTAATTCATATGGTAACTTTAATACAAATGGTACCACTTACTATGCCAATCCGTTTGCCACGGGTTTTGATTTTAACAATACCAAACTACAAGCCAGTGCTCCCGAATTTGTGCCAAGATTTGATAAACTTTCGTTGAACGAAACAGCTCTAGAAGCAAAACAACAAACGGAGAACATGGCTAAACATCCCGAAAACACCAACGTCTATAAAGGCAAACCGCAAGAGCAGTACGATGCTAAAGATGAGGGCAACATACAAGCTGAATCTAAAGATATGGCGAAAAATTTGGATTCTAGTTTTGAAAAAGAAGAGAAACGACAACAGCAGAGACATGAACGTTCTCGTGGTAATAATCGTCATCAGAATAAACATGATAAGGAAAATAACAAGAGAAATAACAATCGTTTGGAAAAGAATATGGAAAGATTTTCTAGGAATTTACAAGAGAAACATCAAAATAATGATTCAGCCTCAAATTCGAACTCTTCCACACCTTCCTTGACCATGAATGGTAGGGAACGGGACCgagagcagcagcagcaaccgGGTATTGCTAAAACTACAGGAGCTTTTAGCAAAAATAATCGTGGTTCTTTGAATGGCAACAATGGAGACAAACAAAGAAATTCTGAGGGCCAAGACAAGGCAAGCGCAGATAAAAACAATTACAATAATAAACGTTATCAAAATGGCAGACGTTCACAAGATTATACAGAACGTGAAGATCGTTACGAACGTTATGCTGATCGTGGCGAACGTTCTGATCGTGGCCACAATCAGCGTAATCAACAGCGCAACGACTACCATCAACGTTATGATAACTATCGCAGCAACAAGAGACGTGATGATTGGAATCGTAATCGTGATCGCATCAATGGTTTTCGTGTAGAGGAAAAATATTCCAATGATAATGGCAAGGAAAGTCCTTTGGCCTCGCCTGAAAAGAGGTCTCCCAAAAAGACTTACGAGAAAGAAAACGAAAAACTGTCGCAAAGAGAAAAACTTATAAGAGATATAGAAAATAGACGTCTGGAATGTTTAGTTTGCGTAGAGCCCATTAAGGCTCATCAGGGTGTTTGGTCTTGTCATAATTGCTATCATATACTCCACTTGCAGTGCATAATAAAATGGGCCTCGTCCTCGAAGTCGGATGATGGATGGCGTTGTCCTGCTTGTCAGAATGTTGAAAAAGATGTTCCTCGTGACTACTACTGTTTCTGTGGCAAATTGAAAAATCCCACAAATAATCGTCAAGATATTGCTCACTCTTGCGGGGAAGTATGCGGACGTGTAGAGGGCTGTTCACATGCCTGTACTCTGCAGTGTCATCCCGGGCCTTGCCCTCCCTGTCAGGCTCAAGTTAAACGCGAATGTGGTTGTGGCAAGACTTCCAAAACCATGCAATGTTGTTTAAAGGAGACCATAGAATGTGATTCAACATGTGAGAAACTCTTGAACTGTGAATTGCACACTTGCGAGGAGAAATGTCATGAGGGAAAATGTCCCGCCTGCAAGGAGAAGGTAGATCAAACTTGTCACTGTTCTAAGCAAGAAAGACAGGTTACTTGTACTCGCGATTCCCATGATAAACACAACTATTCATGTGGCAAACCTTGTGGTAAGGATTTAAGCTGTGGCAATCATAAATGTAAAGATTGCTGCCATCCCAATGAGTGCAGACCCTGTAAATTAAGTCCTGATACTGTGACTTCTTGTCCCTGTGGCAAAATGCCCATTGTTACCGAACAGCGCAAATCTTGCTTAGATCCCATACCCGTATGCGAAGGTGTTTGTAGTAAGACTTTAAAATGTGGCAAAGCCACCAATCCCCATCACTGTACATCCAAGTGTCATTTGGGTAATTGTCCACCATGCAACAAGCAAACGGCGGTCAAGTGTCGCTGTGGCCATATGGATCAAATGATTAAATGTCGCCAGCTGTCGACACGAGCCGATGATGCTAGATGCAAGAAACGCTGCACGAAAAAACGTTCCTGTGGCAAACACAAGTGTAATCAAGAGTGCTGCATAGACATCGACCACTTTTGCCCACTGCCTTGTAACTATACGCTCTCTTGTGGCAAGCACAAGTGTGATCAACCCTGTCATCGCGGTAATTGTCCGCCCTGCTATCGTTCCTCCTTCGAAGAACTCTTCTGTGAGTGTGGTGCTGAAGTTATCTATCCTCCTGTGCCCTGCGGCACTAAGCGTCCCGTTTGCAAGCGCCCCTGTTCGCGTAAACATCCTTGCGATCATGCGCCACAACATAACTGCCATTCAGCAGCCACTTGTCCTCCCTGTATGATGTTCACCACCAAATGGTGTTATGGCCAGCATGAACAACGCAAAACCATACCCTGTTCTCAGCACAGTTTCTCATGCGGTATGGCTTGTAATAAACCTTTGCCTTGTGGCCGCCACAAGTGTATTAAGACTTGTCATGAGGGTCCGTGTCAAGTGCCCGGTGAGATATGCAAACAAAGCTGTACTACTGCCCGTTCCAATTGCGGCCACAAGTGTATGTCGCCATGTCACAATGGAGATTGCCCAGAAACACCATGTAAAGAAATGGTTGAAGTTCAATGCGAATGCGGCAATCGCAAACAAATGCGCACTTGTGCTGAATTGGTTCGCGAATTCAGTCGCATTGCTACTGCCCAGCTGGCCTCATCCATGGCTGAAATGCAGCGTGGTAACTACATGGAATTATCGGAAATTTTAGCTCCTGTCAAACTCTCCGGTAAATCGAATAAAACTTTAGATTGTAACGAAGAATGTCGTCTACTTGAACGTAATCGTCGTTTGGCTATTGGTCTACAAATACGCAATCCAGATTTGCCGCAAAAACTCTTAACAAAATATTCGGATTTCATACGCAACTTTGCTAAACGTGATCCGGTTTTGGTCAAGTCGATTCATGAAGCTCTAACCACTCTGGTGAAATTGGCCAAAGAGAGTAAACAAAAGTCACGCTCACATTCATTTCCCACCATGAATCGTGAAAAGCGACAGTTGGTTCATGAAATGTGTGAAATGTTTGGCGTAGAATCGGTGGCCTATGATGCTGAACCGAATCGTAATGTGGTAGCTACTGCTTTTAAGGATAGAtcttGGCTTCCTGCTACCAGTATTATGGAAGTAGTAGCTCGTGAGGCTGGTCAAAGACGTGTACCAGTGCCGAGTAATAATGCCTGGGGTTTAAAGAGATAA
Protein Sequence: MSADSKSQSSSQPPLSQLWPGFGSTSNDLSNPLEHHQHHPTNQTPTQSLSMSLPKHHHQQPTNINNNYVNFNQFIMQHNLKSPHQTKSPLSSSLDDKFTKVEGQNSKYDDVFSFIQNMEGMYNNNNVNAKGSNNNAISGSSNVTNNGGSTNSNHQQQTQQLKHQQYNYFDPTLPQYPFANYNNQISNNNSVFSDGFQQYNINPNTGPGISTSAAIKTSSTASSTANPNVYDNTNSYGNFNTNGTTYYANPFATGFDFNNTKLQASAPEFVPRFDKLSLNETALEAKQQTENMAKHPENTNVYKGKPQEQYDAKDEGNIQAESKDMAKNLDSSFEKEEKRQQQRHERSRGNNRHQNKHDKENNKRNNNRLEKNMERFSRNLQEKHQNNDSASNSNSSTPSLTMNGRERDREQQQQPGIAKTTGAFSKNNRGSLNGNNGDKQRNSEGQDKASADKNNYNNKRYQNGRRSQDYTEREDRYERYADRGERSDRGHNQRNQQRNDYHQRYDNYRSNKRRDDWNRNRDRINGFRVEEKYSNDNGKESPLASPEKRSPKKTYEKENEKLSQREKLIRDIENRRLECLVCVEPIKAHQGVWSCHNCYHILHLQCIIKWASSSKSDDGWRCPACQNVEKDVPRDYYCFCGKLKNPTNNRQDIAHSCGEVCGRVEGCSHACTLQCHPGPCPPCQAQVKRECGCGKTSKTMQCCLKETIECDSTCEKLLNCELHTCEEKCHEGKCPACKEKVDQTCHCSKQERQVTCTRDSHDKHNYSCGKPCGKDLSCGNHKCKDCCHPNECRPCKLSPDTVTSCPCGKMPIVTEQRKSCLDPIPVCEGVCSKTLKCGKATNPHHCTSKCHLGNCPPCNKQTAVKCRCGHMDQMIKCRQLSTRADDARCKKRCTKKRSCGKHKCNQECCIDIDHFCPLPCNYTLSCGKHKCDQPCHRGNCPPCYRSSFEELFCECGAEVIYPPVPCGTKRPVCKRPCSRKHPCDHAPQHNCHSAATCPPCMMFTTKWCYGQHEQRKTIPCSQHSFSCGMACNKPLPCGRHKCIKTCHEGPCQVPGEICKQSCTTARSNCGHKCMSPCHNGDCPETPCKEMVEVQCECGNRKQMRTCAELVREFSRIATAQLASSMAEMQRGNYMELSEILAPVKLSGKSNKTLDCNEECRLLERNRRLAIGLQIRNPDLPQKLLTKYSDFIRNFAKRDPVLVKSIHEALTTLVKLAKESKQKSRSHSFPTMNREKRQLVHEMCEMFGVESVAYDAEPNRNVVATAFKDRSWLPATSIMEVVAREAGQRRVPVPSNNAWGLKR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01194961;
90% Identity: iTF_00260356;
80% Identity: -