Basic Information

Insect: Pharmacophagus antenor
Gene Symbol: -
Assembly: GCA_018245475.1
Location: DWQX01004764.1:4119-13027[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 23 0.012 2.1 10.5 0.9 3 23 229 250 228 250 0.92

2 23 0.25 46 6.3 0.3 1 22 632 653 632 653 0.95

3 23 4.9 9e+02 2.3 0.3 1 22 695 716 695 718 0.82

4 23 0.4 73 5.7 0.5 2 21 728 747 727 748 0.93

5 23 0.95 1.7e+02 4.5 0.1 2 23 756 778 755 778 0.89

6 23 0.0044 0.8 11.9 0.1 3 23 799 820 797 820 0.96

7 23 0.0014 0.25 13.4 2.5 1 23 826 849 826 849 0.95

8 23 0.092 17 7.7 0.0 1 23 875 898 875 898 0.90

9 23 0.004 0.74 12.0 3.5 1 23 903 925 903 925 0.97

10 23 0.0078 1.4 11.1 0.3 1 23 931 954 931 954 0.95

11 23 0.0017 0.31 13.2 1.3 1 23 968 990 968 990 0.97

12 23 0.00013 0.024 16.7 1.8 1 23 1039 1062 1039 1062 0.97

13 23 0.001 0.19 13.9 1.4 1 23 1123 1146 1123 1146 0.96

14 23 0.00081 0.15 14.2 2.1 2 23 1170 1192 1169 1192 0.95

15 23 0.064 12 8.2 0.1 2 23 1198 1220 1197 1220 0.93

16 23 0.0073 1.3 11.2 0.2 1 21 1263 1283 1263 1284 0.95

17 23 0.00031 0.056 15.5 1.0 1 23 1294 1316 1294 1316 0.93

18 23 6.5e-05 0.012 17.6 0.3 2 23 1406 1428 1406 1428 0.93

19 23 1.3e-07 2.4e-05 26.1 1.1 3 23 1435 1455 1434 1455 0.98

20 23 0.018 3.2 10.0 0.1 2 23 1475 1496 1474 1497 0.94

21 23 0.089 16 7.8 0.0 1 23 1517 1539 1517 1539 0.97

22 23 0.02 3.7 9.8 0.6 1 23 1545 1568 1545 1568 0.95

23 23 0.00019 0.034 16.2 0.4 1 23 1576 1599 1576 1599 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	23	0.012	2.1	10.5	0.9	3	23	229	250	228	250	0.92
2	23	0.25	46	6.3	0.3	1	22	632	653	632	653	0.95
3	23	4.9	9e+02	2.3	0.3	1	22	695	716	695	718	0.82
4	23	0.4	73	5.7	0.5	2	21	728	747	727	748	0.93
5	23	0.95	1.7e+02	4.5	0.1	2	23	756	778	755	778	0.89
6	23	0.0044	0.8	11.9	0.1	3	23	799	820	797	820	0.96
7	23	0.0014	0.25	13.4	2.5	1	23	826	849	826	849	0.95
8	23	0.092	17	7.7	0.0	1	23	875	898	875	898	0.90
9	23	0.004	0.74	12.0	3.5	1	23	903	925	903	925	0.97
10	23	0.0078	1.4	11.1	0.3	1	23	931	954	931	954	0.95
11	23	0.0017	0.31	13.2	1.3	1	23	968	990	968	990	0.97
12	23	0.00013	0.024	16.7	1.8	1	23	1039	1062	1039	1062	0.97
13	23	0.001	0.19	13.9	1.4	1	23	1123	1146	1123	1146	0.96
14	23	0.00081	0.15	14.2	2.1	2	23	1170	1192	1169	1192	0.95
15	23	0.064	12	8.2	0.1	2	23	1198	1220	1197	1220	0.93
16	23	0.0073	1.3	11.2	0.2	1	21	1263	1283	1263	1284	0.95
17	23	0.00031	0.056	15.5	1.0	1	23	1294	1316	1294	1316	0.93
18	23	6.5e-05	0.012	17.6	0.3	2	23	1406	1428	1406	1428	0.93
19	23	1.3e-07	2.4e-05	26.1	1.1	3	23	1435	1455	1434	1455	0.98
20	23	0.018	3.2	10.0	0.1	2	23	1475	1496	1474	1497	0.94
21	23	0.089	16	7.8	0.0	1	23	1517	1539	1517	1539	0.97
22	23	0.02	3.7	9.8	0.6	1	23	1545	1568	1545	1568	0.95
23	23	0.00019	0.034	16.2	0.4	1	23	1576	1599	1576	1599	0.96

Sequence Information

Coding Sequence: atgagtGTGAATTATGACCGTGTTTGTAGACTGTGCTTGTCATCTCGAGGCGAATTACTGCCTATATTTTCTACCACCAGTTCGGATGACTCGGAACCTCCTGTCCTCGCATCGAAAATTAGGGATTGTGTGTCTATAGAGATAAACGAGGATGACGACTTGCCAACTAATGTTTGCAGAAAATGCTGTGACAATGTCAATAACTGGCATATTTTTAAGGCTGTATGTGAGAGGACACAAAACAAACTACACTCTCTTATAAAAAATGATGGCAGCCAACTAGAAGAGGTGCACATTAAAAGTGAACCTTTGTCTGATGAGGCTTATGATGATGGAGTTGTTGTTGATGCATCATATCCTGACCTTGAGaaTGCATCATCAAGTAAAATTCAACCAGAGGGCCCTCCTATACTGGCATCATTGGGACTCACACCAAGGAGTGATAAGAAATATATAGATCCCAGGAAGGACTGGCACCGGGTGCATGCAATATTGGATATGATTCAAGAAGATGAGGGGATGGAGAGTGAAAATAACGAAGAAGATTACGAAGAAGAGATGAATGATAATGTTCAACAATTTGCAAATGTACCCAATATGCCCGAGGTGTCCATCACTGTTATGCGCCCTTCTGGAGAAACTTTGCATGCTCGCCAAGGAATCCAACAACTCGCTTCAAAGGACTGTCTCGTGTGTGGTCGCTCTTATAGATACTCTCATAACGCTAGGCGTCACGAGCTCAATGCTCATAGTTTTGATAGATACACTAACAAAGTTACAACCAAAAAGTCTCATAATGCACACATGCAACCAAAACTTAGGCCCAATCCATTTAATCCCAAAGCAAGACTTATGCCAAATCCTATCAGTcataaaatgcaattaattccCAAAGGAATCAGTGCTAAAATTATCCACAGCAATACTATCGCTCCACCAAAACCTATACCGATCAAAACACCAAAGGCCCCTCAAAATAATTTGCCATATCCCCTTCGTATAAAAGCGCTTAAAGacttacaaataaagaaaaaagaaccgCAGATCCTTAAAACATTATTGACTACAAAACCCGAGATATTGGTCTCCGAGCCAGAAATCATGAATTCTGGCCCAGAAAGTCCCGAAACCTTGATATCCGAGCCAGAGATAGCATCATTTCAAGTAGAAGCTATTCTTTCGGAACCAGATGCTTACAATCAACATGATGACGAAGATGTAGATTGTGAAGGTCAAAATAATCAGGGACAGAATTACGATACTGTTGACATGGAGTCCGATAACGAGATTGAGATAGCTCGTCAGCAAGAAGGGGCTGATGGTGACCTAGATCATCAAGATAATGAAGGGGACGAAGGTAATGAAATGGAAAACTTAGATAATGAAGACGAAAACAACATGGAAAGAAACCAAAGCGACAATGACAATGATCGAATTGACGATAACGCTGATAGTCAAGATGCATTGCGGATCGGGAATAATGCTGAAGGTAGAGATGATGATGAACACAAAGAAGGCGAGGACAGAAACGAGGAAAGAGATTATGACGAGCAGCTGGAATATAACCACGATGACGACGATGACGATGATTTGCCTCCAATAGCTCCTGTAGTGGAAATTAATGAAGATTTGCAAACAAATTCATACAATAGTGAAGCTAATGACGATGACGAACTGGACGAAACCGGCGATCcaaatgaaaccgtagatgatgTTAAAGAACTTGACCCTGATAAGTTATATGTAACTAAAACACAAAGAGACTTTATACTCAAATATCGCGACATCATCGAACAGATCAATACAAAGAGGTGTCTTTGCTGCGATAGAGAACACCCGCGGCGCAAGGCTGTCATACAACATTTACAGAAAAATGGACACAAAGTCCCGAAACATACATGTTacaattgtgttgtaactttcGGACATATCGGCGCTTTACTAAGCCACATGCGGTCTAACACTTGCACGGACTTgtggaaaataatttacaacgaAAATGGGATAACTGACGATTTAGTTTTGGAGGATGAACCTAAAGATACCAAAGTTCaatataaagacatttttaatgcTAGGTCATATGCATGCAAATTATGTCCTGCAAAATTTCAACTGAAACAGTTTATTATGAAACATGTTTTAGATGTGCACGAGGATGGCCAGTCCCGTGTACAACTGGTATGTGTTCACTGTAATTCTAGATTCAAAGATAAGGCGATATGGAAGAAGCACATACGTAATGGGGAATGTACGGTTTACATCTCGTGTGACTTATGTTCAGAGAGATTTGGGAACATGCAAGATTTCAATGACCATGCATTAGCCGTACACGCGGGAAGCTTCGACCAGTCTGATAATCAGAACAAATGTGTCGACGGACGTCCGACAGACTGTCCGATTTGCGGAAAGAAGAATAGCAGCTATCCAAATTTAGTAAAACACTTGAAGATCATACACAGCGAAGAGAAACCGCACTACTGTCAGCATTGTGATTCTAAATTTGAACAAGCTGcagatttaaataaacacatctATATGGAACATTCTGATCGAACACTGGGAATGCAAAGCAGCGAGCCCGATATGTCTCTTGTTAAAGAAGAAGCCGAGGAATATCATTATTCCTGCACAGAATGTAACGCCATATTTGAGACCGTCGACGCTTGGACAGATCATCAGGTGGCTGAACATAATCAAGTAGCTCATCATTGCGATCAGTgtgataagaaatttttaagaccGTCTGAACTGGCGGAACACAAGAATACGCATTtacgtgtaaaattttatccctGCAGTATTTGCTCGAATTCTTACAGTACACCTCAGAAACTTTCCGAACACGTTCAACAGAACCACCCCGGAGCCTCGGGAACGTATGCACCTCTGGATTACGAATTTTTCTGCGACATTTGTATCAGATCGTTTAAAAGTCGTCAGGCTTACTCGAACCACATGCGTATACACGCTAAAGTACCTACTACAAACAGGAAACCAGGGGAACCGAAAGGCTTTGCCCCCCAAATTGTTGGGAAGCCAATACGATCCTTTTCTGTGGTGCAACCTAGTTTTCTACCATTCAAACCTAATTGTAATGTTCCTAACGCACCTTATTCGTGTGACATCTGCGGAAAGGGTTTCATGCACAAGAAGAACATCTGGAAGCATAAGAAAGTGCTCCACGCCGATCTGGTGGGTGATAGAAATGATAGTGAAGAAAATACCATGCAAGCTTCTACTGAAGAGGATGAATATAATTTAGACGAAAATGGAGCTATTCTGTCGACTCCCCAgttcaatagttttaattttaccaaTTTATCTAATAGCTTTCCTCAACAGACTTCCCAAGAACCTGCCCCCTACTCTTGCGAAATATGCTTTAAACGATTTCCACTTAGAACAAGTTTGTGGAAACATAAACGAGCTAAGCACGGAATCATCAATGCTAGTGCCAGTGGTAGTGGTGATACTCAAGTTATGCCAGGAGAAGGAGGCAGGTCGAGTTGTACAATTTGCAAAATTACGTTCTCTGACAAAAAATCTTACTACCGTCATAGAAAGAATGTTCATAAATCCTCAGCGCAGATGTGCAAAATTTGCGGAAAACCTTTAAATTCTACTTTGGAATTGTACGAGCACCTAAAAGCCGCTCACGCTAGGGAGCTATTGGGATATAACGCGAGTCAAGGTTCCAGCAAACAGGAAATAGTTCAAGAATTAGAAGTTGAGTATGAAGGTGATCAGGATTCGGTAGATCCTACAGTAGAGTACCAAGCCCGATATCCGTGTGACACCTGCGGTAAACAGTTTGTAGGTTTGCTTGCGTTGCAAAACCATCAATGTATAAATCAAATACAGTCGTCTCCTCAAACGTTCGATTGTGAAATTTGCCACAAGAGCTATACATCAATCTCTGCATTAAAGAGCCACCGCGGGTGGCATTTACGTTCCCCCGATGGTAAAGCTGCTGCCAACAACACCGGCCTCTGGATGCCACAGCATAAAGTTACTAGCAAAGTGAGCAAACATGAAGTTGTAGACCCGTCTCAACTCGCACGAGTCACTCATTCAACACCAGCGAGCATAGCTAAAAGAAGACTACCTCCGGAAGTGGAAGTCACTGTCGTGAATCCCAACAAGAAAATGCGTTCCGATGATTCAGTGGAATTGGAGCAACAGAACAATTCGTCCACCGGAGCCGAAGATAGATATTGTAACATATGCGATAAAGAGTTCACCAAGCGGGCGGCTTACCAACGCCACATGGACGAAGTCCACCAACCGAACTCGGTGTTCTGTCCGGTTTGTGACAAGAGTTTTACGCGCAAATCTACACTGATCGTTCATATGAAGAAACATTACGATAGCGGTGAAGGTAGTTCCACCGCCGTCGATCAGATGGAGGACGACACTCTCTCGTGCGACATCTGTGGTGCTCAATATGACAACGAGAACGCCCTCTCAGCCCACCGAGCGATGCACCACGGCGACGAATCGGGCGAGTCGGAGGACGACGGCACCAGCGTGCCGCCGCCGGGCGAGTTCACTTGCGGGCAGTGCGGCGACGGGGTGGCTACACCACGGGACCTCATCGCGCACCGCACCATGCACGCGACGCCCACCAAGTTCTTCTGCAACATCTGCAAGGTTTACTTCGCGCGTGCACTTGACCTGTCGTCACACACGCGCGCCAGGCACGCGGACAATGAGAAGGTGTTCTTTCCGTGCGCGATGTGCGACCGGTTCTATATGAACAAGAAGAGCCTGCAGCGGCACATTGAGATGGCCCACTGA
Protein Sequence: MSVNYDRVCRLCLSSRGELLPIFSTTSSDDSEPPVLASKIRDCVSIEINEDDDLPTNVCRKCCDNVNNWHIFKAVCERTQNKLHSLIKNDGSQLEEVHIKSEPLSDEAYDDGVVVDASYPDLENASSSKIQPEGPPILASLGLTPRSDKKYIDPRKDWHRVHAILDMIQEDEGMESENNEEDYEEEMNDNVQQFANVPNMPEVSITVMRPSGETLHARQGIQQLASKDCLVCGRSYRYSHNARRHELNAHSFDRYTNKVTTKKSHNAHMQPKLRPNPFNPKARLMPNPISHKMQLIPKGISAKIIHSNTIAPPKPIPIKTPKAPQNNLPYPLRIKALKDLQIKKKEPQILKTLLTTKPEILVSEPEIMNSGPESPETLISEPEIASFQVEAILSEPDAYNQHDDEDVDCEGQNNQGQNYDTVDMESDNEIEIARQQEGADGDLDHQDNEGDEGNEMENLDNEDENNMERNQSDNDNDRIDDNADSQDALRIGNNAEGRDDDEHKEGEDRNEERDYDEQLEYNHDDDDDDDLPPIAPVVEINEDLQTNSYNSEANDDDELDETGDPNETVDDVKELDPDKLYVTKTQRDFILKYRDIIEQINTKRCLCCDREHPRRKAVIQHLQKNGHKVPKHTCYNCVVTFGHIGALLSHMRSNTCTDLWKIIYNENGITDDLVLEDEPKDTKVQYKDIFNARSYACKLCPAKFQLKQFIMKHVLDVHEDGQSRVQLVCVHCNSRFKDKAIWKKHIRNGECTVYISCDLCSERFGNMQDFNDHALAVHAGSFDQSDNQNKCVDGRPTDCPICGKKNSSYPNLVKHLKIIHSEEKPHYCQHCDSKFEQAADLNKHIYMEHSDRTLGMQSSEPDMSLVKEEAEEYHYSCTECNAIFETVDAWTDHQVAEHNQVAHHCDQCDKKFLRPSELAEHKNTHLRVKFYPCSICSNSYSTPQKLSEHVQQNHPGASGTYAPLDYEFFCDICIRSFKSRQAYSNHMRIHAKVPTTNRKPGEPKGFAPQIVGKPIRSFSVVQPSFLPFKPNCNVPNAPYSCDICGKGFMHKKNIWKHKKVLHADLVGDRNDSEENTMQASTEEDEYNLDENGAILSTPQFNSFNFTNLSNSFPQQTSQEPAPYSCEICFKRFPLRTSLWKHKRAKHGIINASASGSGDTQVMPGEGGRSSCTICKITFSDKKSYYRHRKNVHKSSAQMCKICGKPLNSTLELYEHLKAAHARELLGYNASQGSSKQEIVQELEVEYEGDQDSVDPTVEYQARYPCDTCGKQFVGLLALQNHQCINQIQSSPQTFDCEICHKSYTSISALKSHRGWHLRSPDGKAAANNTGLWMPQHKVTSKVSKHEVVDPSQLARVTHSTPASIAKRRLPPEVEVTVVNPNKKMRSDDSVELEQQNNSSTGAEDRYCNICDKEFTKRAAYQRHMDEVHQPNSVFCPVCDKSFTRKSTLIVHMKKHYDSGEGSSTAVDQMEDDTLSCDICGAQYDNENALSAHRAMHHGDESGESEDDGTSVPPPGEFTCGQCGDGVATPRDLIAHRTMHATPTKFFCNICKVYFARALDLSSHTRARHADNEKVFFPCAMCDRFYMNKKSLQRHIEMAH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01155687;
90% Identity: iTF_01130185; iTF_00180665; iTF_00249864; iTF_01115854;
80% Identity: -