Basic Information

Insect: Byasa hedistus
Gene Symbol: -
Assembly: GCA_029286795.1
Location: JAGSMW010000016.1:3399732-3408008[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 23 0.01 1.1 10.7 1.6 2 23 205 227 204 227 0.92

2 23 0.23 25 6.4 0.3 1 22 607 628 607 628 0.95

3 23 4.6 4.9e+02 2.3 0.3 1 22 670 691 670 693 0.82

4 23 0.55 59 5.2 0.5 2 21 703 722 702 723 0.93

5 23 0.89 94 4.5 0.1 2 23 731 753 730 753 0.89

6 23 0.0074 0.79 11.1 0.1 3 23 774 795 772 795 0.96

7 23 0.0045 0.47 11.8 2.5 1 23 801 824 801 824 0.95

8 23 0.086 9.1 7.7 0.0 1 23 850 873 850 873 0.90

9 23 0.0038 0.4 12.0 3.5 1 23 878 900 878 900 0.97

10 23 0.0073 0.77 11.1 0.3 1 23 906 929 906 929 0.95

11 23 0.0016 0.17 13.2 1.3 1 23 943 965 943 965 0.97

12 23 0.00012 0.013 16.7 1.8 1 23 1014 1037 1014 1037 0.97

13 23 0.00096 0.1 13.9 1.4 1 23 1099 1122 1099 1122 0.96

14 23 0.00076 0.08 14.2 2.1 2 23 1146 1168 1145 1168 0.95

15 23 0.0037 0.4 12.0 0.0 2 23 1174 1196 1173 1196 0.94

16 23 0.0068 0.72 11.2 0.2 1 21 1239 1259 1239 1260 0.95

17 23 0.00029 0.03 15.5 1.0 1 23 1270 1292 1270 1292 0.93

18 23 6e-05 0.0064 17.7 0.3 2 23 1382 1404 1382 1404 0.93

19 23 1.2e-07 1.3e-05 26.1 1.1 3 23 1411 1431 1410 1431 0.98

20 23 0.0028 0.3 12.4 0.1 3 23 1452 1472 1450 1473 0.94

21 23 0.098 10 7.6 0.0 1 23 1493 1515 1493 1515 0.98

22 23 0.019 2 9.8 0.6 1 23 1521 1544 1521 1544 0.95

23 23 0.00061 0.065 14.5 0.4 1 23 1552 1575 1552 1575 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	23	0.01	1.1	10.7	1.6	2	23	205	227	204	227	0.92
2	23	0.23	25	6.4	0.3	1	22	607	628	607	628	0.95
3	23	4.6	4.9e+02	2.3	0.3	1	22	670	691	670	693	0.82
4	23	0.55	59	5.2	0.5	2	21	703	722	702	723	0.93
5	23	0.89	94	4.5	0.1	2	23	731	753	730	753	0.89
6	23	0.0074	0.79	11.1	0.1	3	23	774	795	772	795	0.96
7	23	0.0045	0.47	11.8	2.5	1	23	801	824	801	824	0.95
8	23	0.086	9.1	7.7	0.0	1	23	850	873	850	873	0.90
9	23	0.0038	0.4	12.0	3.5	1	23	878	900	878	900	0.97
10	23	0.0073	0.77	11.1	0.3	1	23	906	929	906	929	0.95
11	23	0.0016	0.17	13.2	1.3	1	23	943	965	943	965	0.97
12	23	0.00012	0.013	16.7	1.8	1	23	1014	1037	1014	1037	0.97
13	23	0.00096	0.1	13.9	1.4	1	23	1099	1122	1099	1122	0.96
14	23	0.00076	0.08	14.2	2.1	2	23	1146	1168	1145	1168	0.95
15	23	0.0037	0.4	12.0	0.0	2	23	1174	1196	1173	1196	0.94
16	23	0.0068	0.72	11.2	0.2	1	21	1239	1259	1239	1260	0.95
17	23	0.00029	0.03	15.5	1.0	1	23	1270	1292	1270	1292	0.93
18	23	6e-05	0.0064	17.7	0.3	2	23	1382	1404	1382	1404	0.93
19	23	1.2e-07	1.3e-05	26.1	1.1	3	23	1411	1431	1410	1431	0.98
20	23	0.0028	0.3	12.4	0.1	3	23	1452	1472	1450	1473	0.94
21	23	0.098	10	7.6	0.0	1	23	1493	1515	1493	1515	0.98
22	23	0.019	2	9.8	0.6	1	23	1521	1544	1521	1544	0.95
23	23	0.00061	0.065	14.5	0.4	1	23	1552	1575	1552	1575	0.96

Sequence Information

Coding Sequence: atgagtGTGAATTATGATCGTGTTTGTAGACTGTGCTTGTCATCTCGAGGCGAATTACTGCCTATATTTCCTACCACCAGTTCGGATGACTCGGAACCTCCTGTCCTCGCATCGAAAATCAGGGATTGTGTGTCTGTAGAGATAAACGAGGATGACGACTTGCCAACTAACGTTTGCAGAAAATGCTGTGACAATGTCAATAATTGGCATATTTTTAAGGCTGTATGTGAGAGGACTCAAAACAAACTAcagtcattaataaaaaatgatggCAGCCAACTAGAAGAGGTGCACATAAAAAGTGAACCTTTGTCTGATGAGGCTTATGATGATGGAGTTATTGTTGATGCAGCATATTCTGACCTTGAGagTGCATCAAGTAAAATTCAACCAGAAGGCCCTCCTATTCTGGCTTCATTGGGCCTCACACCAAGGAGTGATAAGgggATGGAGAgtgaaaataatgaagaagAAGACGACGAAGAAGAGATGAATGATAATAATCAACACTTCCCAAATGTACCCAATATGCCTGAGGTCTCTATCACTGTTATGCGTCCATCTGGAGAAACTTTGCACGCTCGTCAAGGAATCCAACAACTTGCTTCTAAGGAGTGCCTGGTGTGTGGACGCTCTTACAGATACTCCCATAATGCCAGGCGTCATGAGCTCAATTCCCACAGTTTTGATAGATAcactaacaaaattacaacCAAAAAGTCACATACTGTACACATGCACCCAAAACTTAGGCCCAATCCATTCAACCCTAAAGCTAGACTTATGCCAAATCCTATAAGCCACAAAATGCAATTAATTCCGAAAGGAATAAGCGCGAAAATTATACAAGGGAATACTGCCGCTTCACCTAAACCTATACCAATAAAAACACCTAACATTCCTCATAATAATTTGCCATATCCACTTCGAATAAAAGCACTTACGGACTtgcaaataaagaaaaaagaacCGCATATTCTTAAAACTTTACTGACTACAAAACCGGAAGTTTTGGTTTCGGAACCAGAAATCATGAATTCCGGCCCAGAAAGTCCGGAAACCTTGATATCCGAACCAGAGATAGCATCGTTTCAAGTAGAAGCTATTCTTTCGGAACCTGATGCTTATAATCAACAAGATGACGAAGATGTAGACTGCGAAACGCAAAATAATCAAGGTCATAATTACGATACTGTGGATATGGAGTCCGATAATGAGATTGAAATAGCTCGTCAGCAAGAAGTTATCGAAGGAGAGGTTGACCATCAAGTAGATAACGAAGGGGAGGAAGGAAATGGAATGGAAAATGTAGATAACGATGATGAAAATAACGTGGAAAGAAATCATAGCGACAATGATCAAATTGACGATAATGCTGATAGTCAAGATGTGTTACAGATTGTTAATAATGCTGAAGGAGGAGGGGACGATGAAACCAAAGAAGGTGAAGAAGGAAATGAGGATAGAGATGATGATGAGCAGCTAGAATATAACAATGAAGATGATGACGACGACTTACCTCCTATAGCTCCAGTCGTAGAAATAAATGAAGATATGCAAACAAATTCCTATAATAGTGAGGCAAACGAAGAGGAAGAAATGGACGAAACTGGTGACGTGAATGAAACCGCAGATGATGTTAAAGAACTTGACCCTGATAAActatatgtaacaaaaacacaaaaagaatttatactaaaatatcgTGATATCATCGAGCagattaatacaaaaagatGTCTTTGTTGTGACAGAGTGCACCCGAGGCGCAAAGCCGTCATACAACATTTACAGAAAAATGGACACAAGGTCCCGAAACACACTTGTTACAATTGTGTTGTTACATTCGGACATATCGGCGCTTTACTCAGCCACATGCGGTCTAATACCTGCACCGACTTGtggaaaattatatacaacgaAAATGGGATCACTGACGATTTAGTTTTGGAAGATGAACCGAAAGATACCAAAGTCCAATacaaagacatttttaatgcTAGGTCGTACGCGTGTAAACTATGTCCTGCAAAATTCCAACTAAAACAGTTCATTATGAAACATGTTTTAGACGTGCATGAAGATGGCCAGTCCCGCGTACAACTCATATGTGTCCACTGTAACTCCAGATTTAAAGACAAGGCTATATGGAAGAAGCACATCCGTAATGGGGAGTGTACAGTTTACATCTCGTGCGACTTATGTTCAGAGAGGTTTGGGAACATGCAAGATTTTAATGACCACGCATTAGCTGTACACGCGGGGAGCTTTGATCAGTCTGATAATCAGAACAAATGCGTCGATGGAAGACCGACTGACTGTCCGGTTTGTGGGAAAAAGAATAGCAGCTATCCAAATTTAGTGAAACACTTGAAAATTATTCACAGTGAAGAAAAACCTCACTACTGCCAACATTGTGAATCTAAGTTTGAACAAGCTGCCGATTTAAACAAGCACATCTACATGGAACATTCAGACAGAACTTTGGGAATGCAAAGCTTCGAGCCGGATATGTCACTCGTTAAAGAAGAAGCCGAGGAATATCACTATTCCTGCACAGAATGTAACGCAATATTCGAGACCGTCGACGCTTGGACAGATCATCAGGTTGCTGAACATAATCAAGTTGCTCATCACTGTGATCAGTGtgataagaaatttttaagacCGTCTGAACTGGCGGAACACAAGAATACGCATTTACGGGTGAAGTTTTATCCTTGCAGTATTTGCTCTAATTCGTACAGTACACCTCAGAAACTTTCCGAACACGTTCAACAGAACCACCCGGGCGCCGCGGGAGCGTTTGCACCTTTGGACTATGAATTTTTCTGCGACATCTGTATAAGATCATTCAAAAGTCGCCAGGCGTATTCTAACCATATGCGTATACACGCTAAGGTACCGACTACCAACAGAAAACCCGGGGATCCGAAAGGATTTGCCCCGCAAATTGTCGGAAAGCCAATTCGGTCATTTTCTGTAGTACAACCCAGTTTTCTTTCCTTCAAACCCAATTGTAATGTGCCTAACGCTCCTTATTCGTGTGATATTTGCGGAAAGGGTTTCATGCACAAGAAAAATATCTGGAAGCACAAGAAAGTGCTTCATGCCGATCTGGTCGGCGATAGGAATGATAGTGAAGAGAATACCATGCAAGCTTCTACTGAAGAGgatgaatataatttagacGAAAATGGAGCTATTCTGTCGACTCCCCAgttcaatagttttaattttactaacttaacCAATAACTTCCCGCAGCAACAGAATTCCCAGGACGCTACGCCTTATTCTtgtgaaatatgttttaaacgaTTCCCGCTTAGAACAAGTTTATGGAAACATAAACGAGCTAAGCACGGTATTATCAACGCAAGTGCCAGCGGCAGTGCGGACTCTCAAGGTATGATTGGAGAGGGTGGTAGATCGAGTTGtactatttgtaaaattacgtTCTCAGACAAAAAATCGTATTACCGCCACAGAAAGAATGTTCACAAGTCTTCGGCACAGATGTGCAAAATTTGCGGAAAGCCTTTAAATTCTCCGGTAGAATTGTATGAGCATTTGAAAGCTGCTCACGCCAGGGAGCTACTGGGATATAACGCGAACCAAGGATCCAGCAAGCAGGAGATGGTTCAAGAATTGGAAGTTGAATATGAAGGTGATCAGGATTCTGTAGATCCCACCATGGAGTACCAAGCCCGTTACCCATGTGACACTTGCGGTAAGCAGTTTGTAGGGTTGCTCGCCTTGCAAAACCACCAATGTATAAATCAATTACAGTCGTCCCCTCAAACGTTTGATTGCGAAATTTGTCACAAAAGCTACACCTCTATCTCTGCACTGAAAAGCCACCGCGGCTGGCATTTACGTTCCCCTGATGGTAAAGCGGCGGCCAACAACACCGGCCTTTGGATGCCGCAGCATAAAGTAACTAGCAAAGTCAGCAAACACGAAGTCGTTGACCCGTCCCAACTAGCAAGAGTAACACATTCAACACCTGCGAGCATAGCCAAAAGAAGACTTCCCCCAGAAGTGGAAGTGACAGTCGTGAACCCAAATAAGAAAATGCGCTCTGACGATTCAGTAGAGTTGGAGCAACAGAACAATTCATCAACGGGAGCCGAAGATAGATATTGTAACATATGCGATAAAGAGTTCACCAAGCGGGCGGCCTACCAACGCCACATGGACGAAGTTCATCAACCTAATTCCGTGTTCTGTCCGGTTTGTGACAAGAGCTTCACACGAAAATCTACGCTGATCGTTCACATGAAAAAACATTACGAAAGTGGAGAGGGCAGCTCCGCCGTTATCGATCAGATGGAGGACGACGCACTCGCGTGCGACATTTGCGGCGCCCAATACGACAGCGAGAGCGCTCTCAACGCGCACCGAGCGATGCACCACGGCGACGACTCCGGCGAGTCGGAGGACGACGGCACAAGCGTGGCGCCGCCGGGCGAGTTCACGTGCGCGCAGTGCGGCGACGGCGTGGCCACGCCCCGGGACCTCATCGCCCACCGCTCCATGCACGCGACGCCGACCAAGTTCTTCTGCAACATCTGCAAGGTCTACTTCGCGCGGGCCCTCGACCTCTCCTCGCACACGCGCGCTCGGCACGCGGACAATGAAAAGGTGTTCTTTCCGTGCGCGATGTGCGAGCGATTTTATATGAACAAGAAGAGCCTGCAGCGGCATATTGAGATGGCCCACTGA
Protein Sequence: MSVNYDRVCRLCLSSRGELLPIFPTTSSDDSEPPVLASKIRDCVSVEINEDDDLPTNVCRKCCDNVNNWHIFKAVCERTQNKLQSLIKNDGSQLEEVHIKSEPLSDEAYDDGVIVDAAYSDLESASSKIQPEGPPILASLGLTPRSDKGMESENNEEEDDEEEMNDNNQHFPNVPNMPEVSITVMRPSGETLHARQGIQQLASKECLVCGRSYRYSHNARRHELNSHSFDRYTNKITTKKSHTVHMHPKLRPNPFNPKARLMPNPISHKMQLIPKGISAKIIQGNTAASPKPIPIKTPNIPHNNLPYPLRIKALTDLQIKKKEPHILKTLLTTKPEVLVSEPEIMNSGPESPETLISEPEIASFQVEAILSEPDAYNQQDDEDVDCETQNNQGHNYDTVDMESDNEIEIARQQEVIEGEVDHQVDNEGEEGNGMENVDNDDENNVERNHSDNDQIDDNADSQDVLQIVNNAEGGGDDETKEGEEGNEDRDDDEQLEYNNEDDDDDLPPIAPVVEINEDMQTNSYNSEANEEEEMDETGDVNETADDVKELDPDKLYVTKTQKEFILKYRDIIEQINTKRCLCCDRVHPRRKAVIQHLQKNGHKVPKHTCYNCVVTFGHIGALLSHMRSNTCTDLWKIIYNENGITDDLVLEDEPKDTKVQYKDIFNARSYACKLCPAKFQLKQFIMKHVLDVHEDGQSRVQLICVHCNSRFKDKAIWKKHIRNGECTVYISCDLCSERFGNMQDFNDHALAVHAGSFDQSDNQNKCVDGRPTDCPVCGKKNSSYPNLVKHLKIIHSEEKPHYCQHCESKFEQAADLNKHIYMEHSDRTLGMQSFEPDMSLVKEEAEEYHYSCTECNAIFETVDAWTDHQVAEHNQVAHHCDQCDKKFLRPSELAEHKNTHLRVKFYPCSICSNSYSTPQKLSEHVQQNHPGAAGAFAPLDYEFFCDICIRSFKSRQAYSNHMRIHAKVPTTNRKPGDPKGFAPQIVGKPIRSFSVVQPSFLSFKPNCNVPNAPYSCDICGKGFMHKKNIWKHKKVLHADLVGDRNDSEENTMQASTEEDEYNLDENGAILSTPQFNSFNFTNLTNNFPQQQNSQDATPYSCEICFKRFPLRTSLWKHKRAKHGIINASASGSADSQGMIGEGGRSSCTICKITFSDKKSYYRHRKNVHKSSAQMCKICGKPLNSPVELYEHLKAAHARELLGYNANQGSSKQEMVQELEVEYEGDQDSVDPTMEYQARYPCDTCGKQFVGLLALQNHQCINQLQSSPQTFDCEICHKSYTSISALKSHRGWHLRSPDGKAAANNTGLWMPQHKVTSKVSKHEVVDPSQLARVTHSTPASIAKRRLPPEVEVTVVNPNKKMRSDDSVELEQQNNSSTGAEDRYCNICDKEFTKRAAYQRHMDEVHQPNSVFCPVCDKSFTRKSTLIVHMKKHYESGEGSSAVIDQMEDDALACDICGAQYDSESALNAHRAMHHGDDSGESEDDGTSVAPPGEFTCAQCGDGVATPRDLIAHRSMHATPTKFFCNICKVYFARALDLSSHTRARHADNEKVFFPCAMCERFYMNKKSLQRHIEMAH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01155687;
90% Identity: iTF_01176328;
80% Identity: -