Basic Information

Insect: Atrophaneura dixoni
Gene Symbol: -
Assembly: GCA_018248015.1
Location: DWHX01002872.1:5613-13995[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 23 0.012 2 10.6 1.6 2 23 241 263 240 263 0.92

2 23 0.29 46 6.3 0.3 1 22 642 663 642 663 0.95

3 23 5.7 9.1e+02 2.3 0.3 1 22 705 726 705 728 0.82

4 23 0.69 1.1e+02 5.2 0.5 2 21 738 757 737 758 0.93

5 23 1.1 1.8e+02 4.5 0.1 2 23 766 788 765 788 0.89

6 23 0.0092 1.5 11.1 0.1 3 23 809 830 807 830 0.96

7 23 0.0056 0.88 11.7 2.5 1 23 836 859 836 859 0.95

8 23 0.11 17 7.7 0.0 1 23 885 908 885 908 0.90

9 23 0.0047 0.74 12.0 3.5 1 23 913 935 913 935 0.97

10 23 0.0091 1.4 11.1 0.3 1 23 941 964 941 964 0.95

11 23 0.002 0.31 13.2 1.3 1 23 978 1000 978 1000 0.97

12 23 0.00015 0.024 16.7 1.8 1 23 1049 1072 1049 1072 0.97

13 23 0.0012 0.19 13.8 1.4 1 23 1134 1157 1134 1157 0.96

14 23 0.00094 0.15 14.2 2.1 2 23 1181 1203 1180 1203 0.95

15 23 0.0047 0.74 12.0 0.0 2 23 1209 1231 1208 1231 0.94

16 23 0.0085 1.3 11.2 0.2 1 21 1274 1294 1274 1295 0.95

17 23 0.00036 0.057 15.5 1.0 1 23 1305 1327 1305 1327 0.93

18 23 7.5e-05 0.012 17.6 0.3 2 23 1417 1439 1417 1439 0.93

19 23 1.5e-07 2.4e-05 26.1 1.1 3 23 1446 1466 1445 1466 0.98

20 23 0.009 1.4 11.1 0.1 3 23 1487 1507 1485 1508 0.94

21 23 0.12 19 7.5 0.0 1 23 1528 1550 1528 1550 0.98

22 23 0.023 3.7 9.8 0.6 1 23 1556 1579 1556 1579 0.95

23 23 0.00077 0.12 14.5 0.4 1 23 1587 1610 1587 1610 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	23	0.012	2	10.6	1.6	2	23	241	263	240	263	0.92
2	23	0.29	46	6.3	0.3	1	22	642	663	642	663	0.95
3	23	5.7	9.1e+02	2.3	0.3	1	22	705	726	705	728	0.82
4	23	0.69	1.1e+02	5.2	0.5	2	21	738	757	737	758	0.93
5	23	1.1	1.8e+02	4.5	0.1	2	23	766	788	765	788	0.89
6	23	0.0092	1.5	11.1	0.1	3	23	809	830	807	830	0.96
7	23	0.0056	0.88	11.7	2.5	1	23	836	859	836	859	0.95
8	23	0.11	17	7.7	0.0	1	23	885	908	885	908	0.90
9	23	0.0047	0.74	12.0	3.5	1	23	913	935	913	935	0.97
10	23	0.0091	1.4	11.1	0.3	1	23	941	964	941	964	0.95
11	23	0.002	0.31	13.2	1.3	1	23	978	1000	978	1000	0.97
12	23	0.00015	0.024	16.7	1.8	1	23	1049	1072	1049	1072	0.97
13	23	0.0012	0.19	13.8	1.4	1	23	1134	1157	1134	1157	0.96
14	23	0.00094	0.15	14.2	2.1	2	23	1181	1203	1180	1203	0.95
15	23	0.0047	0.74	12.0	0.0	2	23	1209	1231	1208	1231	0.94
16	23	0.0085	1.3	11.2	0.2	1	21	1274	1294	1274	1295	0.95
17	23	0.00036	0.057	15.5	1.0	1	23	1305	1327	1305	1327	0.93
18	23	7.5e-05	0.012	17.6	0.3	2	23	1417	1439	1417	1439	0.93
19	23	1.5e-07	2.4e-05	26.1	1.1	3	23	1446	1466	1445	1466	0.98
20	23	0.009	1.4	11.1	0.1	3	23	1487	1507	1485	1508	0.94
21	23	0.12	19	7.5	0.0	1	23	1528	1550	1528	1550	0.98
22	23	0.023	3.7	9.8	0.6	1	23	1556	1579	1556	1579	0.95
23	23	0.00077	0.12	14.5	0.4	1	23	1587	1610	1587	1610	0.96

Sequence Information

Coding Sequence: atgagtGTGAATTATGATCGTGTTTGTAGACTGTGCTTGTCATCTCGAGGCGAATTACTGCCTATATTTCCTACCACCAGTTCGGATGACTCGGAACCTCCTGTCCTCGCATCAAAAATCAGGGATTGTGTGTCTGTAGAGATAAACGAGGATGACGACTTGCCAACTAATGTTTGCAGAAAATGCTGTGACAATGTCAATAACTGGCATATTTTTAAGGCTGTATGTGAGAGGACTCAAAACAAACTAcagtcattaataaaaaatgatggCAGCCAACTAGAAGAGGTGCACATAAAAAGTGAACCTTTGTCTGATGAGGCTTATGATGATGGAGTTATTGTTGATGCATCATATCCTGACCTTGAGattGCATCAAGTAAAATTCAACCAGAAGGCCCTCCTATTCTGGCTTCATTGGGCCTCACACCAAGGAGTGATAAGAATTATATAGATCCCAGGATGGACTGGCATCGGGTGCACGCTATATCGGATATAATTCAAGATGAAGATGTTATTGACTCTCTGCAGTCTACTGAAGAATGTGATGGGATGGAGAgtgaaaataatgaagaagaagacgaCGAAGAAGAaatgaatgataataatagtCAACACTTCCCAAATGTACCCAATATGCCCGAGGTCTCTATCACTGTTATGCGTCCATCTGGAGAAACTTTACACGCTCGTCAAGGAATCCAACAACTTGCTTCTAAAGAGTGCCTGGTGTGTGGACGTTCTTATAGATACTCCCATAACGCTAGGCGCCATGAGCTTAATTCCCACAGTTTTGACAgatacacaaacaaaattacaaacaaaaagtcaCATAATGTACACATGCACCCAAAACTCAGGCCCAATCCATTCAATCCTAAAGCTAGACTTATGCCAAATCCAATCAGCCACAAAATGCAATTAATTCCGAAAGGAATAAGCGCGAAAATTATACAAGGAAATACTGTCGCTTCTAAACCTATACCAATAAAAACACCAAACATTCCTCATAATAATTTGCCATATCCACTGCGAATAAAAGCACTAAAGGacttacaaataaagaaaaaagaaccgcatattcttaaaactttattgacTACAAAACCGGAAGTTTTGGTTTCGGAACCTGAAATCATGAATTCAGGTCCAGAAAGTCCGGAAACTTTGATATCCGAGCCAGAGATAGCATCATTTCAAGTAGAAGCTATTCTATCAGAACCGGATGCTTACAATCAACAAGATGACGAAGATGTAGATTGCGAAGCTCAAAATAATCAAGGTCATAATTACGATACTGTGGATATGGAGTCagataatgaaattgaaatagcTCGTCAGCAAGAAGGTGTTGAAGGAGAAGTTGACCATCAAGTAGATAACGAAGGAGAGGATGGAAATGGAATGGAAAATATAGATAACGATGATGAAAATAACGTGGAAAGAAATCATAGCGACAATGATCAAATTGACGATAATACCGATAGTCAAGATGTTTTGCAGATTGTTAATGATGCTGAAGGTAGAGGGGACGATGAAACCAAAGAAGGTGAAGAAGGAAATGAGGATAGAGATGATGATGAGCAGCTAGAATATAACCATGAAGACGATGATGACGACTTACCTCCTATAGCTCCAGTCGtagaaataaatgaagataTGCAAACAAATTCCTACAATAGTGAGGCAAACGAAGACGAAGAAATGGATGAAGCTGGTGACGTGAATGAAACGGCAGATGATGTTAAAGAACTCGACCCAGATAAACtgtatgtaacaaaaacacaaagagACTTTATACTCAAATATCGTGACATCATTGAgcaaattaacacaaaaagaTGTCTTTGTTGCGACAGAGAGCACCCGCGGCGCAAAGCCGTCATACAACATTTACAGAAAAATGGACACAAGGTTCCGAAGCACACTTGTTACAATTGTGTTGTTACGTTCGGGCATATCGGCGCTTTACTCAGCCATATGCGGTCTAACACCTGTACCGACTTgtggaaaattatttacaacgaAAATGGGATCACTGACGATTTGGTTTTGGAAGATGAACCTAAAGATACCAAAGTCCaatataaagacatttttaatgctAGATCGTACGCGTGCAAATTATGTCCTGCAAAATTCCAACTGAAACAGTTCATTATGAAACATGTTTTAGACGTGCATGAAGATGGCCAGTCTCGCGTACAACTCATATGTGTCCACTGTAACTCCAGATTTAAAGATAAGGCTATCTGGAAGAAGCACATCCGTAATGGGGAATGTACAGTTTACATCTCGTGCGACTTATGTTCAGAGAGATTTGGGAACATGCAAGATTTCAATGATCACGCATTGGCTGTACACGCGGGGAGCTTTGATCAGTCTGATAATCAGAACAAATGCGTCGATGGAAGACCGACTGATTGTCCGGTTTGTGGGAAGAAGAATAGCAGCTATCCAAATCTAGTGAAACACTTGAAAATTATTCACAGTGAAGAAAAACCTCATTACTGCCAGCATTGTGAATCTAAGTTTGAACAAGCTGCCGACTTAAACAAGCACATCTATATGGAACATTCAGACAGAACTTTGGGAATGCAAAGCTACGAGCCGGATATGTCACTCGTTAAAGAAGAAGCTGAGGAATATCACTATTCCTGTACAGAATGTAACGCAATATTCGAGACCGTCGACGCTTGGACAGATCATCAGGTGGCTGAACATAATCAAGTCGCTCATCACTGTGACCAGTGtgataagaaatttttaagaCCATCTGAACTGGCGGAACACAAGAATACGCATTTACGGGTGAAGTTTTATCCCTGCAGTATTTGCTCGAATTCGTACAGTACACCTCAGAAACTTTCCGAACACGTTCAACAGAACCACCCGGGAGCCGCGGGAGCGTTTGCACCTTTGGACTATGAATTTTTCTGTGACATCTGTATAAGATCGTTTAAAAGTCGCCAGGCGTATTCGAACCATATGCGTATACACGCTAAGGTACCGACTACCAACAGAAAACCTGGAGATCCGAAAGGATTTGCCCCGCAAATTGTCGGGAAGCCAATTCGGTCATTTTCTGTAGTACAGCCTAGTTTTCTCTCCTTTAAACCCAATTGTAATGTTCCTAATGCTCCTTATTCGTGTGATATTTGCGGAAAGGGTTTCATGCACAAGAAAAATATCTGGAAGCACAAGAAAGTACTTCACGCCGATCTGGTCGGCGATAGGAATGATAGTGAAGAGAATACCATGCAGGCTTCTACTGAAGAGgatgaatataatttagacGAAAATGGAGCTATTCTGTCGACTCCCCAgttcaatagttttaattttactaacataaCAAATAGTTTCCCGCAGCAACAGAGTTCCCAGGACGCTACGCCTTATTCTTGTGAAATATGTTTCAAACGATTCCCGCTTAGAACAAGTTTATGGAAACATAAACGAGCTAAGCACGGTATCATCAACGCAAGTGCCAGCGGCAGTGCTGACTCTCAAGGTATGACAGGAGAGGGCGGAAGATCGAGTTGtactatttgtaaaattacgtTCTCAGACAAAAAATCCTATTACCGCCATAGAAAGAACGTTCACAAGTCTTCAGCACAGATGTGTAAAATTTGCGGAAAACCTTTAAATTCTCCGGTAGAATTGTACGAGCATTTGAAAGCTGCTCACGCGAGAGAGCTACTGGGATATAACGCGAACCAAGGATCCAGCAAGCAGGAGATTGTTCAAGATTTAGAAGTTGAATATGAAGCTGATCAGGATTCTGTAGATCCCTCTATGGAGTATCAAGCCCGTTATCCATGTGACACTTGCGGTAAACAGTTTGTAGGTTTGCTCGCATTACAAAACCACCAATGTATAAATCAATTACAGTCGTCCCCACAAACGTTTGATTGCGAAATTTGTCACAAAAGCTACACCTCTATCTCTGCACTGAAAAGCCACCGCGGCTGGCATTTACGTTCCCCTGATGGTAAAGCGGCCGCCAACAACACCGGCCTTTGGATGCCGCAGCATAAAGTTACTAGCAAAGTTAGCAAACACGAGGTCGTTGACCCTTCCCAACTAGCAAGGGTTACTCATTCAACACCTGCGAGCATAGCCAAAAGAAGACTTCCCCCAGAAGTGGAAGTGACAGTCGTGAACCCCAATAAGAAAATGCGCTCCGACGATTCGATAGAGCTGGAGCAACAGAACAATTCATCAACGGGAGCCGAAGATAGATATTGTAACATATGCGATAAAGAGTTCACGAAGCGGGCGGCCTATCAACGTCACATGGACGAAGTTCATCAACCGAATTCCGTGTTCTGTCCGGTTTGCGACAAGAGCTTCACACGAAAATCTACGCTGATCGTGCACATGAAAAAACATTACGAAAGTGGAGAGGGCAGTTCCGCCGTCATCGATCAGATGGAGGACGACGCGCTCGCGTGCGACATTTGCGGCGCCCAATACGACAGCGAGAGCGCTCTCAGCGCCCACCGCGCGATGCACCACGGCGACGATTCCGGCGAGTCGGAGGACGACGGCACAAGCGTGGCGCCGCCCGGCGAGTTCACGTGCGCGCAGTGCGGCGACGGCGTGGCCACGCCCCGGGACCTCATCGCCCACCGCTCCATGCACGCCACGCCGACCAAGTTCTTCTGCAACATCTGCAAGGTTTACTTCGCGCGGGCCCTCGACCTGTCGTCGCACACGCGCGCCCGGCACGCGGACAACGAAAAAGTGTTTTTTCCGTGCGCGATGTGCGAGCGATTCTATATGAACAAGAAGAGCCTGCAGCGGCACATTGAGATGGCCCACTGA
Protein Sequence: MSVNYDRVCRLCLSSRGELLPIFPTTSSDDSEPPVLASKIRDCVSVEINEDDDLPTNVCRKCCDNVNNWHIFKAVCERTQNKLQSLIKNDGSQLEEVHIKSEPLSDEAYDDGVIVDASYPDLEIASSKIQPEGPPILASLGLTPRSDKNYIDPRMDWHRVHAISDIIQDEDVIDSLQSTEECDGMESENNEEEDDEEEMNDNNSQHFPNVPNMPEVSITVMRPSGETLHARQGIQQLASKECLVCGRSYRYSHNARRHELNSHSFDRYTNKITNKKSHNVHMHPKLRPNPFNPKARLMPNPISHKMQLIPKGISAKIIQGNTVASKPIPIKTPNIPHNNLPYPLRIKALKDLQIKKKEPHILKTLLTTKPEVLVSEPEIMNSGPESPETLISEPEIASFQVEAILSEPDAYNQQDDEDVDCEAQNNQGHNYDTVDMESDNEIEIARQQEGVEGEVDHQVDNEGEDGNGMENIDNDDENNVERNHSDNDQIDDNTDSQDVLQIVNDAEGRGDDETKEGEEGNEDRDDDEQLEYNHEDDDDDLPPIAPVVEINEDMQTNSYNSEANEDEEMDEAGDVNETADDVKELDPDKLYVTKTQRDFILKYRDIIEQINTKRCLCCDREHPRRKAVIQHLQKNGHKVPKHTCYNCVVTFGHIGALLSHMRSNTCTDLWKIIYNENGITDDLVLEDEPKDTKVQYKDIFNARSYACKLCPAKFQLKQFIMKHVLDVHEDGQSRVQLICVHCNSRFKDKAIWKKHIRNGECTVYISCDLCSERFGNMQDFNDHALAVHAGSFDQSDNQNKCVDGRPTDCPVCGKKNSSYPNLVKHLKIIHSEEKPHYCQHCESKFEQAADLNKHIYMEHSDRTLGMQSYEPDMSLVKEEAEEYHYSCTECNAIFETVDAWTDHQVAEHNQVAHHCDQCDKKFLRPSELAEHKNTHLRVKFYPCSICSNSYSTPQKLSEHVQQNHPGAAGAFAPLDYEFFCDICIRSFKSRQAYSNHMRIHAKVPTTNRKPGDPKGFAPQIVGKPIRSFSVVQPSFLSFKPNCNVPNAPYSCDICGKGFMHKKNIWKHKKVLHADLVGDRNDSEENTMQASTEEDEYNLDENGAILSTPQFNSFNFTNITNSFPQQQSSQDATPYSCEICFKRFPLRTSLWKHKRAKHGIINASASGSADSQGMTGEGGRSSCTICKITFSDKKSYYRHRKNVHKSSAQMCKICGKPLNSPVELYEHLKAAHARELLGYNANQGSSKQEIVQDLEVEYEADQDSVDPSMEYQARYPCDTCGKQFVGLLALQNHQCINQLQSSPQTFDCEICHKSYTSISALKSHRGWHLRSPDGKAAANNTGLWMPQHKVTSKVSKHEVVDPSQLARVTHSTPASIAKRRLPPEVEVTVVNPNKKMRSDDSIELEQQNNSSTGAEDRYCNICDKEFTKRAAYQRHMDEVHQPNSVFCPVCDKSFTRKSTLIVHMKKHYESGEGSSAVIDQMEDDALACDICGAQYDSESALSAHRAMHHGDDSGESEDDGTSVAPPGEFTCAQCGDGVATPRDLIAHRSMHATPTKFFCNICKVYFARALDLSSHTRARHADNEKVFFPCAMCERFYMNKKSLQRHIEMAH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01155687;
90% Identity: iTF_01176328;
80% Identity: -