Pant013051.1
Basic Information
- Insect
- Pharmacophagus antenor
- Gene Symbol
- Mblk-1
- Assembly
- GCA_018245475.1
- Location
- DWQX01005351.1:11483-13165[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.7e-13 5e-09 37.3 0.0 1 38 18 56 18 61 0.92 2 2 3.1e-19 1.6e-15 58.1 0.0 1 43 223 266 223 268 0.95
Sequence Information
- Coding Sequence
- TTAAAACGCGCGGCGCTAGAGAGCGCCGGTAACGCGACGCGGCGGACGTACACCGACGACGAGCTGCAGTCGGCGCTGCGCGACATCCAGTCTGGGCGGCTGGGCacgcggcgcgccgccgccatATACAGGATACCGCGCTCCACGCTCCGGAACAAGATCAACAAGTGCGGCCTCGCCACAGATCCCGCGCACGACTCGGAGCCCGACAGCGACCCCGAGAGGACCGACTCGCCGCCATCCGTCATCCTCAAAATACCAACATTCCCACCGCCGGAAGAGAAGAGCCCCTCTCCGGCGACACCCGTCACACCGATAACACCTATCATCCCACCACCGCAGCCGCCGATAAACCCCACATCCCAGCTACTTCTGCCGTCAGTCTTCGCCGATCCACCATCTACTCAACATCTCTTCACGTCCTTGAGCGATGTCATAGCGAAGAGCATCAGCCAGAAGTTCCAGCAGCCTCTGGAAAGGCCGCCGCAGCCCGAGCTACCGTTCATGAGGGCGCCCGATAGGCACGTGTCGGTGATCAAGACGCCACCGGACAACCAGAGAAACTACGCGGCGCCCAGTAATTCTAGAGCGAGCACGAACAACAACGGACAACCGGCTACTGGCGGGAAGGGGACACGCCCCAAGCGAGGCAAATACAGGAACTATGATAGAGATAGCTTGGTAGAAGCGGTGAAAGCCGTGCAGAGAGGGGAGATGTCGGTGCACAGAGCGGGCTCATACTACGGGGTGCCGCACTCGACGCTGGAGTACAAGGTCAAGGAGCGGCACTTGATGCGGCCGAGGAAGAGAGAGCCCAAGCCGCAACAAGAGGCGAAGCCGCAGCCGAAGCCGCCGCCGAAAGTGGCCGCTAAACCATTCTCGAACGGGCTCAACGGACCCGAAGCCTACCCCTCGGGGTACCCATTCTGGGCCGGAGGGTTCGCCCCACCACCAGCGCCCGACCTCTACGCCTCACACATGATGAGGAGATTACGCGACGAAGCGCCGCCGGCGAACGGATCCTTTCTTGAAGGTATCATCAGATCGAGTCTAGAGAGGCCGTTGCTGCAGCGGTTGACGGAGCCGCGGGCGCCGATGGCCACCGGCGAGGCACCCAGCTTGCTGCGGCGCCTGGCCGGGGAGCCGGAAGAGTCCCCGCCGGCGCGGAGGCCGCGCATCGACAGCTCAGATCGGCAGCTGGCCGCGGAGATGCGCGAGGCGGTGCAGAGACTCAGGGCTGACAAGATGCGCCCGCGCAACGGCACCCCGACGCCGCCGGGCgggtcgccgccgccgccccccgccccgccggcgCCCCCCGACCGCGTCTAG
- Protein Sequence
- LKRAALESAGNATRRTYTDDELQSALRDIQSGRLGTRRAAAIYRIPRSTLRNKINKCGLATDPAHDSEPDSDPERTDSPPSVILKIPTFPPPEEKSPSPATPVTPITPIIPPPQPPINPTSQLLLPSVFADPPSTQHLFTSLSDVIAKSISQKFQQPLERPPQPELPFMRAPDRHVSVIKTPPDNQRNYAAPSNSRASTNNNGQPATGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQQEAKPQPKPPPKVAAKPFSNGLNGPEAYPSGYPFWAGGFAPPPAPDLYASHMMRRLRDEAPPANGSFLEGIIRSSLERPLLQRLTEPRAPMATGEAPSLLRRLAGEPEESPPARRPRIDSSDRQLAAEMREAVQRLRADKMRPRNGTPTPPGGSPPPPPAPPAPPDRV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01129964;
- 90% Identity
- iTF_00180385; iTF_00249638; iTF_01496481; iTF_01494241; iTF_01494982; iTF_01495705; iTF_01129964; iTF_00197297; iTF_01115634; iTF_01139539; iTF_01146131;
- 80% Identity
- -