Adix013564.1
Basic Information
- Insect
- Atrophaneura dixoni
- Gene Symbol
- Mblk-1_1
- Assembly
- GCA_018248015.1
- Location
- DWHX01004097.1:3695-11672[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.3e-12 6.4e-09 37.0 0.0 1 38 111 149 111 154 0.92 2 2 7.2e-19 2e-15 57.8 0.0 1 43 316 359 316 361 0.95
Sequence Information
- Coding Sequence
- ATGTCGTTTCGCCGATTCGTAGCGGCTGTGGCTGTGCACTGGCAGCGTCCGCGTCGGGATAGTGGCGGGCCCGGCCTGACGGGGCTTCACTATTCATTACTATTGGAACGCTGGAGACGGGCGCAGCCTATGAACAGGTTGGCGGAAGCATGCGATAAGACACCAGCGGCGAGCTCGTCTCCGACCCTGGCTGAGCAGCCGCTGGATCTGAGCGCGAAGTCCACCTCCAGCACCAGCGGCACACCGccaccggaacacaataactTGGACAACTCTAGATTAAAACGCTCGGCGCTGGACAACGCCGGAAACGCGACGCGGAGGACGTACACCGACGACGAGCTGCAGTCGGCGCTGCGGGACATCCAGTCTGGGCGGCTCGGCACGCGACGGGCCGCCGCCATATATAGGATACCCCGCTCTACGCTCAGGAACAAGATCAACAAGTGCGGCCTCGCCACCGACCCCGCCCACGACTCTGAGCCCGACAGCGACCCCGAAAGGGCCGACTCGCCGCCATCCGTTATACTCAAAATCCCAACATTCCCACCACCGGAAGAGAAAAGCTCGTCCCCGGCGACACCCGTCACTCCAATAACACCTATAATACCACCACCACAACCGCCACTAAACCCCACCTCCCAGCTACTCCTGCCATCTGTCTTCGCCGACCCTCCGTCTACTCAACATCTCTTTACGTCCTTAAGCGATGTCATAGCTAAAAGCATCAGCCAAAAGTTCCAGCAGCCTCTAGAAAGGCCGCCGCAACCCGAATTGCCGTTCATGAGGGCTCCCGACCGGCACGTGTCAGTGATCAAAACACCGCCGGACAACCAGAGGAACTACCCGGCGCCGAGCAATTCCAGAGCGACCCCGAACAATAACGGACAACCCGCTACCGGCGGGAAGGGAACGCGCCCCAAGCGTGGCAAATACAGGAACTACGATAGAGATAGCTTGGTAGAAGCGGTGAAAGCCGTGCAAAGAGGGGAGATGTCGGTGCACAGAGCGGGCTCGTATTACGGGGTGCCCCACTCGACGCTGGAGTACAAGGTGAAAGAGCGGCATTTGATGCGGCCGAGGAAGAGAGAGCCGAAGCCGCAGCAAGAAGCGAAGCCGCAGCCGAAACCGCCGCCGAAGCCCGCCGCCAAACCCTTCTCCAACGGGCTCAACGGACCCGAATCTTACCCGACTGGGTACCCATTCTGGGCAGGCGGATTCGCTCCACCACCGGCACCCGACCTCTACGCCTCGCACATGATGAGGAGATTACGCGACGAAGCGCCGCCGGCGAACGGATCGTTCCTCGAAGGTATCATCAGGTCAAGTTTAGAGAGGCCGCTGCTCCAGCGATTAACGGAGCCGAGAGCGCCTATGGCCACCGGTGAAGCCCCCAGCTTGCTGCGACGACTTGCCGGGGAGCCGGAGGAGTCTCCGCCGGCGCGAAGACCACGCATAGACAGCTCGGACAGACAGCTGGCTGCAGAAATGCGCGAAGCTGTCCAGAGACTTAGAGCTGACAAAATGCGCCCGCGGAACGGAACTCCGACCCCGCCGGGCGggtcgccgccgccgccccccgcgcccccggcGCCTCCCGACCGCGTCTAG
- Protein Sequence
- MSFRRFVAAVAVHWQRPRRDSGGPGLTGLHYSLLLERWRRAQPMNRLAEACDKTPAASSSPTLAEQPLDLSAKSTSSTSGTPPPEHNNLDNSRLKRSALDNAGNATRRTYTDDELQSALRDIQSGRLGTRRAAAIYRIPRSTLRNKINKCGLATDPAHDSEPDSDPERADSPPSVILKIPTFPPPEEKSSSPATPVTPITPIIPPPQPPLNPTSQLLLPSVFADPPSTQHLFTSLSDVIAKSISQKFQQPLERPPQPELPFMRAPDRHVSVIKTPPDNQRNYPAPSNSRATPNNNGQPATGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQQEAKPQPKPPPKPAAKPFSNGLNGPESYPTGYPFWAGGFAPPPAPDLYASHMMRRLRDEAPPANGSFLEGIIRSSLERPLLQRLTEPRAPMATGEAPSLLRRLAGEPEESPPARRPRIDSSDRQLAAEMREAVQRLRADKMRPRNGTPTPPGGSPPPPPAPPAPPDRV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01149521;
- 90% Identity
- iTF_01176122;
- 80% Identity
- -