Oale007397.1
Basic Information
- Insect
- Ornithoptera alexandrae
- Gene Symbol
- Mblk-1
- Assembly
- GCA_029030555.1
- Location
- JARDVY010000031.1:2281817-2285422[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.2e-12 2.9e-09 37.1 0.0 1 38 82 120 82 125 0.92 2 2 3.7e-19 9.1e-16 57.9 0.0 1 43 288 331 288 333 0.95
Sequence Information
- Coding Sequence
- ATGCAGATCGCATGCGGCCGCCGATACCGGCGTATCATTCCAAAGTCAAAGAACCCGTACATCGGACAGTGTCAACGCTCTACTCGCCGGCGAGGAAAGAAATTGCAAGTTTTTCGCACGGACCTGCAGACTGACAGGGAGCTTCCTCATTACTGCCTTATACCTTTAACCACTACATTTTATGGTGacagATTAAAACGCACGGTGCTGGATAACGCCGGCAACGTGACGCGGCGGACGTACACCGACGACGAGCTGCAGTCCGCGCTGCGGGATATCCAGTCGGGGCGGCTCGGCACGCGACGAGCCGCCGCCATATACAGGATACCCCGCTCCACGCTCAGGAACAAGATCAACAAGTGCGGCCTCGCGACCGACCCGGCCCACGACTCCGAGCCCGACAGCGACCCCGAAAGGACGGACTCACCGCCATCTGTTATTCTTAAAATACCAACATTTCCGCCACCGGAAGAAAAGAgcccgtctccggcaacgccTGTTACTCCAATAACACCCATAATCCCACCACCACAACCGCCAATAAACCCCGCCTCCCAGCTGCTTTTGCCGTCTGTCTTCGCCGACCCTCCGTCTAATCAACATCTTTTTACGTCTTTGAGCGACGTAATAGCTAAAAGCATCAGCCAGAAGTTCCAACAGCCTCTAGAAAGGCCGCCGCAGCCCGAACTCCCTCCGTTCATGAGGGCTCCCGACAGGCATGTGTCTGTGATTAAAACACCGCCGGACAGTCAGAGGAATTACGCGGCGCCCAGCAATTCAAGAGCGACCCCGAACAACAACGGGCAACCGGCTACTGGCGGGAAAGGAACCCGCCCCAAGCGAGGCAAATACAGGAACTACGATAGAGATAGTTTGGTAGAAGCTGTGAAAGCTGTGCAGAGGGGGGAAATGTCGGTGCATAGAGCGGGCTCGTACTACGGAGTGCCGCACTCGACGCTGGAGTACAAGGTGAAAGAGCGGCATTTGATGCGGCCGAGGAAGAGAGAACCGAAACCGCCACAAGAAGCGAAGCCGCAGCCAAAACCACCGCCGAAACCAGCCGCGAAACCCTTCTCGAACGGGCTCAACGGGCCCGAAACTTACCCAACTGGGTACCCGTTCTGGGCAGGGGGCTTCGCCCCGCCGCCGGCGCCCGACCTCTACGCCTCACATATGATGAGGAGATTACGCGACGAAGCGCCGCCGGCGAACGGATCCTTCCTCGAAGGTATCATCAGATCGAGTTTAGAGAGGCCATTGCTCCAGCGGTTAACGGAGCCGAGAGCGCCGATGGCCACCAGTGAGGCTCCCAGCTTGCTGCGACGACTAGCCGGGGAGCCAGAGGAGTCTCCGCCGGCGCGAAGACCCCGCATAGACAGCTCGGACAGACAGCTGGCTGCAGAAATGCGCGAAGCTGTCCAAAGACTCAGAGCTGACAAGATGCGCCCTCGGAACGGGACCCCGACACCGCCGGGCGggtcgccgccgccgccgcctgcGCCCGCTCCCCCCGCACCTCCGGCGCCCCCCGATCGCGTCTAG
- Protein Sequence
- MQIACGRRYRRIIPKSKNPYIGQCQRSTRRRGKKLQVFRTDLQTDRELPHYCLIPLTTTFYGDRLKRTVLDNAGNVTRRTYTDDELQSALRDIQSGRLGTRRAAAIYRIPRSTLRNKINKCGLATDPAHDSEPDSDPERTDSPPSVILKIPTFPPPEEKSPSPATPVTPITPIIPPPQPPINPASQLLLPSVFADPPSNQHLFTSLSDVIAKSISQKFQQPLERPPQPELPPFMRAPDRHVSVIKTPPDSQRNYAAPSNSRATPNNNGQPATGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPPQEAKPQPKPPPKPAAKPFSNGLNGPETYPTGYPFWAGGFAPPPAPDLYASHMMRRLRDEAPPANGSFLEGIIRSSLERPLLQRLTEPRAPMATSEAPSLLRRLAGEPEESPPARRPRIDSSDRQLAAEMREAVQRLRADKMRPRNGTPTPPGGSPPPPPAPAPPAPPAPPDRV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01129964;
- 90% Identity
- iTF_01176122;
- 80% Identity
- -