Thel012880.1
Basic Information
- Insect
- Troides helena
- Gene Symbol
- Mblk-1
- Assembly
- GCA_029286815.1
- Location
- JAGSMV010000018.1:4506687-4508379[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.5e-12 2.7e-09 37.2 0.0 1 38 43 81 43 86 0.92 2 2 4.6e-19 8.5e-16 58.0 0.0 1 43 249 292 249 294 0.95
Sequence Information
- Coding Sequence
- ATGAGTTTTCTTATAAGATATCATGGTTGGATACTGGTAGCAGGTTTTCGTTGCGAAAGACCAATCATCAATAGATTAAAACGCTCGGTGCTGGATAACGCCGGCAACTTGACGCGGCGGACGTACACCGACGACGAGCTGCAGTCCGCGCTGCGGGACATCCAGTCGGGGCGGCTCGGCACGCGACGAGCCGCCGCCATATACAGGATACCCCGCTCCACGCTCAGGAACAAGATCAACAAGTGCGGCCTCGCCACCGACCCGGCCCACGACTCCGAACCTGACAGCGATCCCGAAAGAACCGACTCACCGCCATCTGTTATTCTTAAAATACCAACATTTCCGCCGCCGGAAGACAAGAGCCCCTCACCGGCAACGCCTGTCACCCCAATAACACCCATAATCCCACAACCACAACCACCATTAAACCCCGCCTCCCAGCTACTTCTGCCGTCTGTCTTCGCCGACCCTCCGACTAACCAACATCTTTTTACGTCTTTGAGCGACGTAATAGCTAAAAGCATCAGCCAGAAGTTCCAACAGCCCCTAGAAAGGCCGCCGCAGCCCGAACTTCCTCCGTTCATGAGGGCTCCCGACAGGCATGTGTCTGTGATCAAAACACCGCCGGATAGTCAGAGGAACTACGCGGCGCCCAGCAATTCAAGAGCGACCCCGAACAACAACGGGCAACCGGCCACTGGCGGGAAAGGAACGCGCCCCAAGCGAGGCAAATACAGGAACTACGATAGAGATAGTTTGGTAGAAGCTGTGAAAGCGGTGCAGAGGGGGGAGATGTCGGTGCATAGAGCGGGCTCGTACTACGGGGTGCCGCACTCGACGCTGGAGTACAAGGTGAAAGAGCGGCATTTGATGCGGCCGAGGAAGAGAGAACCGAAACCGCAACAAGAAGCGAAACCGCAGCCAAAACCGCCGCCGAAACCGGCCGCGAAACCATTCTCGAACGGTCTCAACGGGCCCGAAACTTACCCAACTGGATACCCGTTCTGGGCGGGAGGCTTCGCCCCGCCGCCGGCGCCCGACCTCTACGCCTCACATATGATGAGGAGATTACGCGACGAAGCGCCGCCGGCGAACGGATCCTTCCTCGAAGGTATCATCAGATCGAGTTTAGAGAGGCCACTGCTCCAGCGATTAACGGAGCCGAGAGCGCCGATGGCCACCAGTGAAGCTCCCAGCTTGCTGCGACGACTAGCCGGGGAGCCAGAGGAGTCTCCGCCGGCGCGACGACCGCGCATAGACAGCTCGGACAGGCAGCTGGCTGCAGAGATGCGCGAGGCTGTCCAGAGACTCAGGGCCGACAAGATGCGCCCGCGGAACGGGACCCCGACGCCGCCGGGCgggtcgccgccgccgccgccgccgccgccggcctcCGCCccggccgcgccgcccgcgccgcccgacCGCGTCTAG
- Protein Sequence
- MSFLIRYHGWILVAGFRCERPIINRLKRSVLDNAGNLTRRTYTDDELQSALRDIQSGRLGTRRAAAIYRIPRSTLRNKINKCGLATDPAHDSEPDSDPERTDSPPSVILKIPTFPPPEDKSPSPATPVTPITPIIPQPQPPLNPASQLLLPSVFADPPTNQHLFTSLSDVIAKSISQKFQQPLERPPQPELPPFMRAPDRHVSVIKTPPDSQRNYAAPSNSRATPNNNGQPATGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQQEAKPQPKPPPKPAAKPFSNGLNGPETYPTGYPFWAGGFAPPPAPDLYASHMMRRLRDEAPPANGSFLEGIIRSSLERPLLQRLTEPRAPMATSEAPSLLRRLAGEPEESPPARRPRIDSSDRQLAAEMREAVQRLRADKMRPRNGTPTPPGGSPPPPPPPPASAPAAPPAPPDRV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01129964;
- 90% Identity
- iTF_01176122;
- 80% Identity
- iTF_01496481;