Pnig018787.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Pentalonia nigronervosa
Gene Symbol
grn
Assembly
GCA_014851325.1
Location
scaffold:36931-104198[-]

Transcription Factor Domain

TF Family
zf-GATA
Domain
zf-GATA domain
PFAM
PF00320
TF Group
Zinc-Coordinating Group
Description
This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 3.3 1.3e+04 -3.5 0.0 12 23 28 39 27 40 0.80
2 3 2.3e-19 8.8e-16 57.8 4.7 1 35 426 459 426 460 0.98
3 3 2e-18 7.6e-15 54.8 6.8 1 35 483 516 483 517 0.97

Sequence Information

Coding Sequence
ATGGAAATGGCTGCCGGCATGGAAGTGGTCGGCGGTACCGGTGCTCACCATCACCACCACCATCACCCGCACCACCGGAGCTGGTACGAGACGCCGGCCGGATCGTCGTCGTCGTGCCGGGACGAGCCGCTGGTGGCCGACAACATGACCGACCACATGAATTCGTTCTTCGCCCATCACCACGTCAGCGCGCTGGACGCCCACCCCGCGGCCAGGGACTACCACCATCACCGGGCGGCGGCAGCGGCCACGGCTGCCGCCGCGGCGCCGTATCACCGCGACTCGCTCACCGTCACCGCCCGCTACTATCACCAGCAAATCCACTCGCCGTTCGCGCCGCCTCCGCCGACGTCGTCGCACGGATCGACGCGAAACATGTGTAGGCCGTCTCACTTTTCTCATCCGGCTGCCGCCTGGCTGAACGGCGGCAACAACAACAACAACAACAACAATAATAACAACAACAACAACGGCAACAACCAGTTGGACACCAAAATGCAATCGTCGTCGCCCGGCGGCGGTTGGTATTCGTCGTCGCCGACGGTGCAGGACGACTCGCCATCGGCGGTCGCTTCCTCGTCCAAAGACATGCAACACTCCGGCGGCGGCGGTGGAGGCAACAACGGCGGTGGAGGCATTGGCGGTGGACATCCGATGTTCACGTTCCCGCCGACACCGCCCAAGGACAGTACGCCCGACTCGATGACCACCGCCACAACGACGGCCACGAGCTCGTCGTCGTCGTCGTCGTCTTCGAACAGCGCGGCGGCCGCGGCTGCCGCTGCGGCCACCGCCTACTCCATAGCGTCCATGGGCGTGTTCCTGCACCCGGACAACCATCAGGGATGCGGCGGAGGCGGAGGCGTCGGCGTCCAGGACGTGAAGCCGTCCATGCTGGTGGCCGGTGGCTCGTCGTCCAAGCAGCGCGAAGGTACCTCGTCGTCGAGCGGCGCCACGTCGCCCGGCAGCTCGACGTCTGCCTCGTCCTCGTTTAACGCGTACCACCTGAACCACCATCATCACCACCTCGGCGGAGGCGGCGGCGGCGGTCAACACGAACCGGCCGCCGGCACCGCTGCCCCGACGTCCTCGTCGTCATACACCCATTATCCCTATCACCACCACCATCACCACCACTCGGCCATCGCTCCCGCCGTTTTCTCGCCCGCCAAACACCCCTCGTCCTCGTGCCATTCGCCCGGCACCAACGCCATGAAAAACTCCTCGTCCTCGTCGTCCAGAAATAAGTCTAGGACCAGCGCCGAAGGACGAGAGTGCGTGAACTGCGGAGCCACGTCGACTCCATTGTGGAGGAGAGACGGCACCGGACACTACCTGTGTAATGCGTGTGGCCTCTACTATAAAATGAACGGGCAAAACCGGCCGCTGATTAAGCCCAAGAGACGTCTGTCCTTGCAGTCGGCTGCCCGCAGAGCCGGGACGAGCTGTGCGAATTGCAAAACGTCCACCACGACGCTGTGGAGGAGAAACCAAAACGGCGAACCCGTTTGCAACGCTTGCGGTCTCTACTATAAACTGCACAACGTTAACCGGCCGTTGACGATGAAAAAAGAAGGCATACAAACACGGAACCGGAAGCTGTCGTCCAAGTCCAAGAAGAAGAAGGGTTCGATAGTTGGTGGCCTGGGTGGCGGAATTGGAGGCGGCATCGGTGGTGGCGGTGGCGGAGGCGGAGGCGCTTGCCTGTCGCTGTCCGGTATGATGCGCGGCGACGGCACCGGCGCGGGTTACCACCACCCGGCGTCCGCGGCCCTGCACCCACACCCCGCGGCAATGAGCCACTATCATCACCACGCGGCCGCTGCGGCCGCGGCCATGTACCATCATCACCATCACCAGGCCACGCAGCCGGCCGCACCCACCGCACCCATACACCCGCACCATCACCACATGGCGTCGCTCACCGGACTCGGGTTGCCCACATCGTCAAACGCGATGGCTAGTTGGAGATCCGAGTACGCGTGA
Protein Sequence
MEMAAGMEVVGGTGAHHHHHHHPHHRSWYETPAGSSSSCRDEPLVADNMTDHMNSFFAHHHVSALDAHPAARDYHHHRAAAAATAAAAAPYHRDSLTVTARYYHQQIHSPFAPPPPTSSHGSTRNMCRPSHFSHPAAAWLNGGNNNNNNNNNNNNNNGNNQLDTKMQSSSPGGGWYSSSPTVQDDSPSAVASSSKDMQHSGGGGGGNNGGGGIGGGHPMFTFPPTPPKDSTPDSMTTATTTATSSSSSSSSSNSAAAAAAAAATAYSIASMGVFLHPDNHQGCGGGGGVGVQDVKPSMLVAGGSSSKQREGTSSSSGATSPGSSTSASSSFNAYHLNHHHHHLGGGGGGGQHEPAAGTAAPTSSSSYTHYPYHHHHHHHSAIAPAVFSPAKHPSSSCHSPGTNAMKNSSSSSSRNKSRTSAEGRECVNCGATSTPLWRRDGTGHYLCNACGLYYKMNGQNRPLIKPKRRLSLQSAARRAGTSCANCKTSTTTLWRRNQNGEPVCNACGLYYKLHNVNRPLTMKKEGIQTRNRKLSSKSKKKKGSIVGGLGGGIGGGIGGGGGGGGGACLSLSGMMRGDGTGAGYHHPASAALHPHPAAMSHYHHHAAAAAAAMYHHHHHQATQPAAPTAPIHPHHHHMASLTGLGLPTSSNAMASWRSEYA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00469287; iTF_01346765; iTF_00463689; iTF_01033385; iTF_01306057; iTF_01329446; iTF_01350351; iTF_00019851; iTF_01304526; iTF_00135825; iTF_00973382; iTF_00418648; iTF_00812378;
90% Identity
iTF_00469287;
80% Identity
-