Dpla008985.1
Basic Information
- Insect
- Drepanosiphum platanoidis
- Gene Symbol
- grn
- Assembly
- GCA_948098885.1
- Location
- OX402534.1:1121138-1164711[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.1e-19 4.1e-16 58.1 4.7 1 35 310 343 310 344 0.98 2 2 1.8e-18 3.5e-15 55.1 6.8 1 35 367 400 367 401 0.97
Sequence Information
- Coding Sequence
- ATGTGCAGGCCGTCTCACTTTTCTCATCcggccgcgtggctgaacggcggcggcggcgtgagcaacaacaacaacaacaacaacaacaacaacggcaacaacaatcagttggacaccaaaatgcaatcgtcctcgcccggaggcggctggtactcgtcgtctccgacggtgcaggacgactcgccgtcggccgtcgcgtcctcctcgaaagacatgcaacactcaggcaacaacaacaacaacaacaacggcggcggcggcggcggcggacatccgatgttcgcgttcccgccgacgccgcccaaggacagcacgcccgactcgatgaccacgacgacgacgacggccacgagctcgtcctcgtcgtcctcgtcgtcgtcCAACAGCGCTGCGGCCGCGGCCGCGGCGGCCGCGGCGTACTCGATCGCGTCCATGGGCGTGTTCCTGCACCCGGACAACCACCAGGGATGCGGAGGCGGAGGCGGCGGCGGCGGCGGAGGACTCGGAGGCGGCGGCGGAGGAGGAGGAGGCGTGCAGGACGTGAAGCCGTCGATGCTGGTGGCCGGCGGCTCGTCGTCCAAACAGCGCGAAGGTACCACCTCGTCGTCGAGCGGCGCCACGTCGCCCGGCAGCTCGACGTCCGCTTCGTCCTCGTTTAACGCGTATCACCTAAACCATCACCACCTCGGCGGCGGCGGCGGCGGCCAACACGAACCGACCGCCGGCACCGCCGCCCCCTCGTCGTCGTCCTACACCCATTACCCCTATCACCACCACCATCACCACCATTCGGCCATCGCCCCGGCCGTGTTCTCGCCCGCCAAACACCCCTCGTCCTCGTGCCATTCGCCCGGCAACAACGCCATGAAAAACTCTTCTTCCTCGTCGTCCAGAAATAAGTCTAGGACCAGCGCCGAAGGACGAGAGTGCGTGAACTGCGGAGCCACGTCGACTCCATTGTGGAGGAGAGACGGCACCGGACACTACCTGTGTAATGCGTGTGGCCTCTACTATAAAATGAACGGGCAAAACCGGCCGCTGATTAAGCCCAAGAGACGTCTGTCCTTACAGTCGGCGGCCCGTAGAGCCGGGACGAGCTGCGCGAATTGCAAAACGTCCACCACGACGCTGTGGAGGAGAAACCAAAACGGCGAACCCGTTTGCAACGCTTGCGGTCTCTACTACAAACTGCACAACGTGAACCGACCGTTGACGATGAAAAAGGAAGGCATCCAGACGCGGAACCGGAAGCTGTCGTCCAAGTCGAAAAAGAAGAAGGGCTCGATAGTCGGCGGCATCGGCGGCGTCGGCGGCCTGGGCGGCGGCGGCGGCGGCGGCGGAGCGTGCCTGTCGCTGTCCAACATGATGCGCGGCGACGGCACCGGCGCCGGCTACCATCACCCGGCGTCCGACGCCCTGCACCCGCACCCCGCGGCCATGAGCCACTACCATCACCACGCGGCCGCCGCGGCCGCGGCCATGTATCACCATCATCACCATCAGGCCACGCAACCGGCCGCGCCGTCCGCGCCCATTCACCCGCACCATCACCACATGGCGTCGCTCACCGGACTCGGATTGCCCACCTCGTCAAACGCGATGGCTGTCACGAAATCGAAAACGCGGAAAAAACTACTGTACGACGTGCTGCGAAGTGGAGAAAAGTATTCGAGCTACTGA
- Protein Sequence
- MCRPSHFSHPAAWLNGGGGVSNNNNNNNNNNGNNNQLDTKMQSSSPGGGWYSSSPTVQDDSPSAVASSSKDMQHSGNNNNNNNGGGGGGGHPMFAFPPTPPKDSTPDSMTTTTTTATSSSSSSSSSSNSAAAAAAAAAAYSIASMGVFLHPDNHQGCGGGGGGGGGGLGGGGGGGGGVQDVKPSMLVAGGSSSKQREGTTSSSSGATSPGSSTSASSSFNAYHLNHHHLGGGGGGQHEPTAGTAAPSSSSYTHYPYHHHHHHHSAIAPAVFSPAKHPSSSCHSPGNNAMKNSSSSSSRNKSRTSAEGRECVNCGATSTPLWRRDGTGHYLCNACGLYYKMNGQNRPLIKPKRRLSLQSAARRAGTSCANCKTSTTTLWRRNQNGEPVCNACGLYYKLHNVNRPLTMKKEGIQTRNRKLSSKSKKKKGSIVGGIGGVGGLGGGGGGGGACLSLSNMMRGDGTGAGYHHPASDALHPHPAAMSHYHHHAAAAAAAMYHHHHHQATQPAAPSAPIHPHHHHMASLTGLGLPTSSNAMAVTKSKTRKKLLYDVLRSGEKYSSY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01168125;
- 90% Identity
- iTF_01346765; iTF_01350351; iTF_00973382; iTF_00463689; iTF_01033385; iTF_01306057; iTF_01329446; iTF_00019851; iTF_01304526; iTF_00135825; iTF_01168125;
- 80% Identity
- -