Basic Information

Insect: Rhopalosiphum padi
Gene Symbol: grn
Assembly: None
Location: scf7180000007979.855866:427885-485025[+]

Transcription Factor Domain

TF Family: zf-GATA
Domain: zf-GATA domain
PFAM: PF00320
TF Group: Zinc-Coordinating Group
Description: This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 3 2.8 1.2e+04 -3.5 0.0 12 23 28 39 27 40 0.80

2 3 2e-19 8.6e-16 57.8 4.7 1 35 426 459 426 460 0.98

3 3 1.7e-18 7.4e-15 54.8 6.8 1 35 483 516 483 517 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	3	2.8	1.2e+04	-3.5	0.0	12	23	28	39	27	40	0.80
2	3	2e-19	8.6e-16	57.8	4.7	1	35	426	459	426	460	0.98
3	3	1.7e-18	7.4e-15	54.8	6.8	1	35	483	516	483	517	0.97

Sequence Information

Coding Sequence: ATGGAAATGGCTGCCGGCATGGAAGTGGTCGGCGGTGCCGGTGCTCATCATCACCACCACCATCATCCGCATCACCGGAGTTGGTACGAGACACCGGCCGGATCGTCGTCGTCGTGCCGGGACGAGCCTCTGGTGGCCGACAACATGTCTGATCACATGAACTCGTTCTTCGCTCATCACCACGTCAGCGCGCTGGACGCTCACCCCGCAGCCAGAGACTACCATCATCACCGGGCTGCAGCGGCGGCCACAGCCGCTGCCGCGGCGCCGTATCACCGCGATTCGCTCACCGTTACCGCCCGCTATTATCACCAGCAGATCCACTCGCCATTCGCACCACCTCCGCCGACGTCGTCGCACGGATCGTCGAGAAACATGTGTAGGCCGTCTCACTTTTCTCATCCGGCTGCCGCCTGGTTGAACGGCGGCAACAACAACAACAATAACAACAATAACAACAACGGCAACAACCAGTTGGACACCAAAATGCAATCGTCGTCGCCCGGGGGCGGTTGGTATTCGTCGTCGCCAACAGTGCAAGACGACTCGCCATCGGCGGTCGCCTCTTCGTCCAAAGACATGCAACATTCCGGCGGAGGTGGTGGCAACAACGGTGGCGGCGGCGTCGGCGGCGGACATCCGATGTTCACGTTCCCGCCGACACCGCCCAAGGACAGCACGCCCGACTCGATGACCACCGCCACGACGACGGCCACGAGCTCGTCCTCGTCGTCGTCGTCTTCGAACAGCGCGGCGGCCGCGGCGGCTGCTGCAGCCACTGCCTACTCCATAGCGTCCATGGGAGTGTTCCTGCACCCGGACAACCATCAGGGATGTGGCGGAGGTGGCGGAGGCGGAGGCGTTGGAGTCCAGGACGTGAAGCCGTCCATGCTGGTGGCTGGTGGCTCGTCGTCCAAACAGCGCGAAGGTACCTCGTCGTCGAGCGGCGCCACGTCGCCCGGCAGCTCGACGTCTGCCTCGTCCTCGTTTAACGCGTACCACCTGAACCACCATCATCACCACCTCGGAGGCGGAGGCGGCGGCGGCGGTCAACACGAACCGACCGCCGGCACCGCCGCCCCGACGTCCTCGTCGTCCTACACCCATTATCCCTATCACCATCACCATCACCACCATTCGGCTATCGCTCCCGCCGTTTTCTCGCCCGCCAAACACCCCTCGTCCTCATGCCATTCGCCCGGCACCAACGCCATGAAAAACTCCTCGTCCTCGTCTTCCAGAAATAAGTCTAGGACCAGCGCCGAAGGACGAGAGTGCGTGAACTGCGGAGCCACGTCGACTCCATTGTGGAGGAGAGACGGCACCGGACACTACCTGTGTAATGCGTGTGGCCTCTACTATAAAATGAACGGGCAAAACCGGCCGCTGATTAAGCCCAAGAGACGTCTGTCCTTGCAATCGGCTGCCCGTAGAGCCGGGACGAGCTGTGCGAATTGCAAAACGTCCACCACGACGCTGTGGAGAAGAAACCAAAACGGCGAACCCGTTTGCAACGCTTGCGGTCTCTACTACAAACTGCACAACGTTAACCGGCCGTTGACGATGAAAAAAGAAGGCATACAGACACGAAACCGGAAACTGTCGTCCAAGTCTAAGAAGAAGAAGGGTTCGATAGTCGGTGGCCTGGGTGGAGGAATTGGTGGTGGCATCGGCGGAGGTGGTGGTGGAGGCGGCGGTGCTTGCCTGTCACTATCCGGAATGATGCGCGGCGATGGCACCGGCGCCGGGTACCATCACCCGGCGTCCGCGGCCCTGCACCCGCACCCCGCGGCGATGAGCCACTACCATCACCACGCGGCCGCTGCGGCCGCGGCCATGTACCACCATCACCATCACCAGGCCACGCAGCCAGCCGCACCCACCGCGCCCATACACCCGCACCACCATCATATGGCGTCGCTCACCGGACTTGGGTTGCCCACATCGTCAAACGCAATGGCTAGTTGGAGATCCGAGTACGCGTGA
Protein Sequence: MEMAAGMEVVGGAGAHHHHHHHPHHRSWYETPAGSSSSCRDEPLVADNMSDHMNSFFAHHHVSALDAHPAARDYHHHRAAAAATAAAAAPYHRDSLTVTARYYHQQIHSPFAPPPPTSSHGSSRNMCRPSHFSHPAAAWLNGGNNNNNNNNNNNGNNQLDTKMQSSSPGGGWYSSSPTVQDDSPSAVASSSKDMQHSGGGGGNNGGGGVGGGHPMFTFPPTPPKDSTPDSMTTATTTATSSSSSSSSSNSAAAAAAAAATAYSIASMGVFLHPDNHQGCGGGGGGGGVGVQDVKPSMLVAGGSSSKQREGTSSSSGATSPGSSTSASSSFNAYHLNHHHHHLGGGGGGGGQHEPTAGTAAPTSSSSYTHYPYHHHHHHHSAIAPAVFSPAKHPSSSCHSPGTNAMKNSSSSSSRNKSRTSAEGRECVNCGATSTPLWRRDGTGHYLCNACGLYYKMNGQNRPLIKPKRRLSLQSAARRAGTSCANCKTSTTTLWRRNQNGEPVCNACGLYYKLHNVNRPLTMKKEGIQTRNRKLSSKSKKKKGSIVGGLGGGIGGGIGGGGGGGGGACLSLSGMMRGDGTGAGYHHPASAALHPHPAAMSHYHHHAAAAAAAMYHHHHHQATQPAAPTAPIHPHHHHMASLTGLGLPTSSNAMASWRSEYA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01168125;
90% Identity: iTF_00469287;
80% Identity: -