Sflv010565.1
Basic Information
- Insect
- Sipha flava
- Gene Symbol
- grn
- Assembly
- GCA_003268045.1
- Location
- NW:658056-715457[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2e-19 4.2e-16 57.7 4.7 1 35 442 475 442 476 0.98 2 2 1.7e-18 3.6e-15 54.8 6.8 1 35 499 532 499 533 0.97
Sequence Information
- Coding Sequence
- ATGGAAATGGCTGCCGGCATGGAAGTGGTCGGCGGTGCCGGGGCTCATCACCACCATCACCATCACGCGCCGCATCACCGGTGGTACGACACGCCGGCCGGTTCGTCTACGTCGTGCAGGGACGAGCCGCTGATGGCCGACAACATGACCGACCACATGAACTCGTTCTTCGCGCATCACCACGCCGGCGCGCTGGACACCCACCCGGCGGCCAGGGACTACCATCATCACCGGGCCGCAGCCGCGGCCACGGCCGCGGCCGCTGTCCCGTACCACCGCGATTCGCTCACCGTCACCGCCCGGTACTATCATCCGCAGATCCACTCGCCGTTCGCACCACCGCCGTCAACCGCGTCGCACGGACCGACGAGAAACATGTGCAGGCCGTCTCACTTTTCTCATCCGGCGGCCGCATGGCTCAACGGCGGCGGCatgaacaacaacaacaacaataacaacaacaacaacaataacaacaatggCAACAACCAGTTGGACACCAAAATGCAATCGTCGTCCCCCGGCGGCGGCTGGTACTCATCGTCCCCGACGGTGCAGGACGACTCGCCGTCGGCCGTGGCATCCTCTTCGAAGGATATGCAGCACTCCGGAGGTGGCGGTGgcggaggaggaggaggaggaggaggtaACAACGGTGGCAACGGGCATCCGATGTTCACGTTCCCACCGACGCCGCCCAAGGACAGCACGCCCGACTCGATGACCACCACCACGACGACGGCCACgagttcgtcgtcgtcgtcgtcatcgaaCAGCGCGGCTGCCGCGGCCGCCGCGGCCGCCGCTTACTCGATAGCGTCCATGGGCGTTTTTCTGCACCCGGACAACCATCAGGGATgcggtggtggcggtggcggcggcggtggaggAGGAGGCGGCGTCCAGGACGTGAAGCCGTCGATGCTGGTGGCCGGGGGCTCGTCGTCCAAACAGCGCGAAGGTACCTCGTCGTCGAGCGGCGCCACGTCGCCCGGCAGCTCGACATCCGCTTCGTCCTCGTTTAACGCGTACCACCTGAACCATCACCACCATctcggcggtggcggtggtggtggcggtggtggcggcggcggggTCGGTCAACACGAACCGACCGCCGGCACCGCTGCTCCCTCGTCGTCGTCCTACACCCATTACCCGtatcaccaccaccatcaccaccattCGGCAATCGCGCCCGCCGTGTTCTCGCCCGCAAAACACCCCTCGTCCTCATGCCATTCGCCCGGCAACAACGCCATGAAAAACTCTTCTTCCTCGTCGTCCAGAAATAAGTCTAGAACAAGCGCCGAAGGACGAGAGTGCGTGAACTGCGGAGCCACGTCGACTCCGTTGTGGAGGAGAGACGGCACCGGACACTACCTGTGTAATGCGTGTGGCCTCTACTATAAAATGAACGGGCAAAACCGGCCGCTGATTAAGCCCAAGAGACGTCTGTCCTTGCAGTCGGCAGCCCGTAGAGCCGGGACGAGCTGTGCGAATTGCAAAACGTCCACCACGACGCTGTGGAGGAGAAACCAAAACGGCGAACCCGTTTGCAACGCTTGCGGTCTCTACTACAAACTGCACAACGTGAACCGACCGTTGACGATGAAAAAGGAAGGCATCCAAACGCGGAACCGGAAGCTGTCGTCAAAGTCGAAAAAGAAGAAGGGCTCGATGGTCGGCGGCATCGGCGgtgtcggcggcggcggtctgggcggcggtggcggcggcggcggcggtggcgcgTGCTTGTCGCTGTCCGGCATGATGCGAGGTGACGGCACCGGCGCCGGTTACCATCATCCGGCGTCCGCGGCCCTGCACCCGCACCCCGCGGCCATGAGCCACTACCATCACCACGCGGCCGCCGCGGCCGCGGCGAtgtaccaccaccaccaccatcaggCCACGCAGCCGGCCGCGCCGTCCGCACCCATACACCCGCACCACCATCACATGGCGTCGCTCACCGGACTCGGGTTGCCCGCCTCGTCGAACATGGCTAGTTGGAGATCCGAGTACGCGTGA
- Protein Sequence
- MEMAAGMEVVGGAGAHHHHHHHAPHHRWYDTPAGSSTSCRDEPLMADNMTDHMNSFFAHHHAGALDTHPAARDYHHHRAAAAATAAAAVPYHRDSLTVTARYYHPQIHSPFAPPPSTASHGPTRNMCRPSHFSHPAAAWLNGGGMNNNNNNNNNNNNNNNGNNQLDTKMQSSSPGGGWYSSSPTVQDDSPSAVASSSKDMQHSGGGGGGGGGGGGGNNGGNGHPMFTFPPTPPKDSTPDSMTTTTTTATSSSSSSSSNSAAAAAAAAAAYSIASMGVFLHPDNHQGCGGGGGGGGGGGGGVQDVKPSMLVAGGSSSKQREGTSSSSGATSPGSSTSASSSFNAYHLNHHHHLGGGGGGGGGGGGGVGQHEPTAGTAAPSSSSYTHYPYHHHHHHHSAIAPAVFSPAKHPSSSCHSPGNNAMKNSSSSSSRNKSRTSAEGRECVNCGATSTPLWRRDGTGHYLCNACGLYYKMNGQNRPLIKPKRRLSLQSAARRAGTSCANCKTSTTTLWRRNQNGEPVCNACGLYYKLHNVNRPLTMKKEGIQTRNRKLSSKSKKKKGSMVGGIGGVGGGGLGGGGGGGGGGACLSLSGMMRGDGTGAGYHHPASAALHPHPAAMSHYHHHAAAAAAAMYHHHHHQATQPAAPSAPIHPHHHHMASLTGLGLPASSNMASWRSEYA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01168125;
- 90% Identity
- iTF_00469287;
- 80% Identity
- -