Mper007320.1
Basic Information
- Insect
- Myzus persicae
- Gene Symbol
- grn
- Assembly
- GCA_001856785.1
- Location
- NW:234379-293222[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 2.4 6.9e+03 -3.5 0.0 12 23 28 39 27 40 0.80 2 3 1.6e-19 4.8e-16 57.8 4.7 1 35 423 456 423 457 0.98 3 3 1.4e-18 4.1e-15 54.8 6.8 1 35 480 513 480 514 0.97
Sequence Information
- Coding Sequence
- ATGGAAATGGCTGCCGGCATGGAAGTGGTCGGCGGTGCCGGCGCTCATCATCATCACCACCATCACCCTCACCACCGGAGCTGGTACGAGACGCCGGCcggatcgtcgtcgtcgtgccgGGACGAGCCGCTGGTGGCCGATAACATGTCGGACCACATGAACTCGTTCTTCGCCCATCACCACGTCAGCGCGCTGGACGCTCACCCCGCGGCCAGGGACTACCATCATCaccgggcggcggcggcggccacaGCCGCTGCCGCGGCGCCGTATCACCGCGACTCACTCACCGTCACAGCACGCTACTATCACCAGCAGATCCACTCGCCGTTCGCTCCGCCACCACCGACGTCGTCGCACGGATCTACGAGAAACATGTGTAGGCCGTCTCACTTTTCTCATCCGGCTGCAGCCTGGCTGAACGGcggcaacaacaacaataacaacaataacaacaacaacaacggtaACAACCAGTTAGACACCAAAATGCAATCGTCGTCACCCGGCGGCGGTTGGTATTCGTCTTCGCCGACGGTACAGGACGATTCGCCATCGGGTGTCGCCTCTTCGTCCAAAGACATGCAACATTCCGGCGGTGGAGGAGGCAacaacggcggcggcgtcggcggcggacATCCGATGTTCACGTTCCCGCCGACACCGCCAAAGGACAGCACGCCCGACTCGATGACCACCGCCACGACGACGGCCACaagctcgtcgtcgtcgtcttcgtcttcGAACAGCGCTGCGGCTGCGGCTGCAGCTGCGGCCACCGCCTACTCCATAGCGTCCATGGGCGTGTTCCTGCACCCGGACAACCATCAGGGATGCGGCGGCGGAGGCGGAGGAGTCGGAGTCCAGGACGTGAAGCCGTCCATGCTGGTGGCCGGTGGCTCGTCGTCCAAACAGCGCGAAGGTACCTCGTCGTCGAGCGGCGCAACGTCGCCAGGCAGCTCGACGTCCGCCTCGTCCTCGTTTAACGCGTACCACCTGAACCATCATCATCACCAcctcggcggcggtggtggcggcggtcAACACGAACCGGCCGCCGGCACTGCTGCCCCGACGTCCTCGTCGTCCTACACCCATTACCCCTatcaccaccaccatcaccaccattCGGCCATCGCTCCCGCCGTTTTCTCGCCCGCCAAACACCCCTCGTCCTCATGCCATTCGCCTGGCACCAACGCCATGAAAAACTCCTCGTCCTCGTCGTCCAGAAATAAGTCTAGGACCAGCGCCGAAGGACGAGAGTGCGTGAACTGCGGAGCCACGTCGACTCCATTGTGGAGGAGAGACGGCACCGGACACTACCTGTGTAATGCGTGTGGCCTCTACTATAAAATGAACGGGCAAAACCGGCCGCTGATTAAGCCCAAGAGACGTCTGTCCTTGCAATCAGCTGCGCGTAGAGCCGGGACGAGCTGTGCGAATTGCAAAACGTCCACCACGACGCTGTGGAGGAGAAACCAAAACGGCGAACCCGTTTGCAACGCTTGCGGTCTCTACTACAAACTGCACAACGTTAACCGGCCATTGACGATGAAAAAGGAAGGAATACAGACACGAAACCGGAAGCTGTCGTCGAAGTCTAAGAAGAAGAAGGGTTCGATAGTCGGTGGTCTAGGTGGCGGAATTGGAGGGGGCAtcggtggtggcggtggtggagGCGGCGGTGCTTGTCTGTCGCTGTCCGGCATGATGCGCGGCGACGGCACCGGCGCGGGTTACCACCACCCGGCATCCGCTGCTCTGCACCCGCACCCTGCGGCAATGAGCCACTACCATCACCACGCGGCCGCTGCGGCCGCGGCCATGTACCACCATCACCATCACCAGGCCACGCAGCCAGCTGCACCCACCGCACCCATACACCCGCACCACCATCACATGGCGTCACTCACCGGACTCGGGTTGCCCACATCGTCAAACGCGATGGCTAGTTGGAGATCCGAGTACGCGTGA
- Protein Sequence
- MEMAAGMEVVGGAGAHHHHHHHPHHRSWYETPAGSSSSCRDEPLVADNMSDHMNSFFAHHHVSALDAHPAARDYHHHRAAAAATAAAAAPYHRDSLTVTARYYHQQIHSPFAPPPPTSSHGSTRNMCRPSHFSHPAAAWLNGGNNNNNNNNNNNNGNNQLDTKMQSSSPGGGWYSSSPTVQDDSPSGVASSSKDMQHSGGGGGNNGGGVGGGHPMFTFPPTPPKDSTPDSMTTATTTATSSSSSSSSSNSAAAAAAAAATAYSIASMGVFLHPDNHQGCGGGGGGVGVQDVKPSMLVAGGSSSKQREGTSSSSGATSPGSSTSASSSFNAYHLNHHHHHLGGGGGGGQHEPAAGTAAPTSSSSYTHYPYHHHHHHHSAIAPAVFSPAKHPSSSCHSPGTNAMKNSSSSSSRNKSRTSAEGRECVNCGATSTPLWRRDGTGHYLCNACGLYYKMNGQNRPLIKPKRRLSLQSAARRAGTSCANCKTSTTTLWRRNQNGEPVCNACGLYYKLHNVNRPLTMKKEGIQTRNRKLSSKSKKKKGSIVGGLGGGIGGGIGGGGGGGGGACLSLSGMMRGDGTGAGYHHPASAALHPHPAAMSHYHHHAAAAAAAMYHHHHHQATQPAAPTAPIHPHHHHMASLTGLGLPTSSNAMASWRSEYA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01168125;
- 90% Identity
- iTF_00469287;
- 80% Identity
- -