Basic Information

Insect: Pararge aegeria
Gene Symbol: -
Assembly: GCA_905163445.1
Location: NC:6216831-6245911[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 8.2e-05 0.0034 17.4 1.5 1 23 413 435 413 435 0.96

2 20 0.0065 0.27 11.4 0.6 1 20 441 460 441 463 0.94

3 20 2.1e-05 0.00086 19.2 5.4 1 23 482 504 482 504 0.98

4 20 1.5e-05 0.00063 19.6 5.6 1 23 510 532 510 532 0.99

5 20 3.4e-05 0.0014 18.6 5.3 1 23 538 560 538 560 0.97

6 20 1.1e-05 0.00044 20.1 7.3 1 23 566 588 566 588 0.97

7 20 7.1e-06 0.00029 20.7 3.8 1 23 594 616 594 616 0.97

8 20 9.7e-05 0.004 17.1 6.7 1 23 622 644 622 644 0.97

9 20 0.00022 0.009 16.0 5.6 1 23 650 672 650 672 0.97

10 20 4.6e-07 1.9e-05 24.4 1.9 1 23 678 700 678 700 0.98

11 20 9.2e-06 0.00038 20.4 7.7 1 23 706 728 706 728 0.98

12 20 3.3e-06 0.00014 21.8 7.6 1 23 734 756 734 756 0.98

13 20 1.6e-06 6.4e-05 22.8 5.3 1 23 762 784 762 784 0.98

14 20 2.7e-05 0.0011 18.9 6.7 1 23 790 812 790 812 0.97

15 20 9.7e-06 0.0004 20.3 4.9 1 23 818 840 818 840 0.97

16 20 4.4e-06 0.00018 21.4 5.9 1 23 846 868 846 868 0.98

17 20 1.6e-05 0.00065 19.6 8.0 1 23 874 896 874 896 0.97

18 20 4.2e-05 0.0017 18.3 7.4 1 23 902 924 902 924 0.96

19 20 0.00052 0.021 14.8 0.3 1 23 931 953 931 953 0.96

20 20 0.014 0.57 10.3 5.3 1 23 961 983 961 983 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	8.2e-05	0.0034	17.4	1.5	1	23	413	435	413	435	0.96
2	20	0.0065	0.27	11.4	0.6	1	20	441	460	441	463	0.94
3	20	2.1e-05	0.00086	19.2	5.4	1	23	482	504	482	504	0.98
4	20	1.5e-05	0.00063	19.6	5.6	1	23	510	532	510	532	0.99
5	20	3.4e-05	0.0014	18.6	5.3	1	23	538	560	538	560	0.97
6	20	1.1e-05	0.00044	20.1	7.3	1	23	566	588	566	588	0.97
7	20	7.1e-06	0.00029	20.7	3.8	1	23	594	616	594	616	0.97
8	20	9.7e-05	0.004	17.1	6.7	1	23	622	644	622	644	0.97
9	20	0.00022	0.009	16.0	5.6	1	23	650	672	650	672	0.97
10	20	4.6e-07	1.9e-05	24.4	1.9	1	23	678	700	678	700	0.98
11	20	9.2e-06	0.00038	20.4	7.7	1	23	706	728	706	728	0.98
12	20	3.3e-06	0.00014	21.8	7.6	1	23	734	756	734	756	0.98
13	20	1.6e-06	6.4e-05	22.8	5.3	1	23	762	784	762	784	0.98
14	20	2.7e-05	0.0011	18.9	6.7	1	23	790	812	790	812	0.97
15	20	9.7e-06	0.0004	20.3	4.9	1	23	818	840	818	840	0.97
16	20	4.4e-06	0.00018	21.4	5.9	1	23	846	868	846	868	0.98
17	20	1.6e-05	0.00065	19.6	8.0	1	23	874	896	874	896	0.97
18	20	4.2e-05	0.0017	18.3	7.4	1	23	902	924	902	924	0.96
19	20	0.00052	0.021	14.8	0.3	1	23	931	953	931	953	0.96
20	20	0.014	0.57	10.3	5.3	1	23	961	983	961	983	0.99

Sequence Information

Coding Sequence: ATGAATCAGgatcatcataatataaatacgggtgGTGGCCAGCCTCCAACCAATTCGGAGTCTCAGAATGCGAGAGTTCAGTCTGCCCAGCAGCAACAGCAGCAGCAACAGTCTAATTTGACGCCAACAACATCTGCTACCGACTTACGAGTTAACTCTGCAGCTGTGAACGTAGCTTTGTCAAGCGTGGCCAAGTACTGGGTGTTTACAAACCTCTTTCCCGGCCCATTGCCGCAGGTTTCAGTCTACGGTTTACCAGGCACAAGGATTGAAAATGGAAAACCAGTTCAGGACCTTGGTCAAGCACATGCTAGTATACTAAATGGTGACCCCAATATTATACTGGGGCATGCTGGGCAGCCTCAAGTCACTGTGTCTGCGGGAGGCCAGCAAATTCCTGTCTCTCAAATAATTGCTACACAGGCTGGCcatgATGGTCTGGTGGGGCACAGCCAGCAGCAAGATGCTTCAGCAAACACTGCACAACTGGCAGTGGCAGGCCAGACCTCCCAGCAGGTACCCAATAACCGGGTGGAATTTGTACAACACCATAACATTGATATGGGTCACCATTCCCAGCAGCATCTGTTGCAGCAACAGCTGATGGCAGCAGCTCGGCCGGACCATGCCAACCAGCagATCCAACTGACCGTCAGCGAGGATGGTATCGTGACGGTGGTGGAGCCGGGTGGTGGAAAACTGGTTGACAAGGAAGAATTGCATGAAGCTATTAAGATGCCCACAGACCACACCCTTACTGTGCACCAGTTGCAACAGATTGTGGGGCATCATCAGGTCATCGACAGTGTGGTCCGTATCGAGCAAGCCACAGGCGAGCCGGCTAATATCCTCGTGACACAGAATCCTGATGGCACGACATCTATAGAAACCAGCGCCGTAGATCCTCTACTTGTCAAAGATGAGAAAAGCGTCGCTAAAATAGATTCTGCGCAGTTCGCCATACCCGCCGATATTAAGGACATCAAAGGAATCGATTTAAAGAGCGCAATGGGTATGGAAGGGGCGGTGGTAAAGATTTCAACGGGCTCCGAGCATGATCTTCACACAATGTACAAAGTGAATGTGGAGGATTTGTCCCAACTCTTGGCATATCATGAAGTGTTTGGAAAACTAAGTGCTGAAGGACAACAGCAAGCTAAGGTGATAAATGACGTAGATGTGGAAGTGGCTGGCACCAGTGCAGCTATGTCCGAAGCTGAATCTTCTCCCGGACACCACGCATGCGATATCTGTGGAAAGATATTCCAGTTTCGATACCAGCTTATTGTCCACAGaCGGTACCACGGCGAGAGCAAACCTTATACGTGTCAAGTTTGTGGATCCGCTTTCGCCAATGCAGTTGAATTATCAAAACACGGAAAATGTCACCTTGCGGGTGACCCAGCCGAGCGTCAAGCAAAAAGATTGGCTCAAGACAAACCGTATGCCTGTTCCACGTGCCACAAGACATTCTCGCGGAAGGAGCATCTCGATAATCACGTTCGGAGTCACACCGGAGAGACGCCATAcagGTGTCAGTACTGCTCGAAGACGTTCACTCGCAAGGAGCACATGGTCAACCACGTGCGGAAACACACGGGCGAGACGCCACACCGCTGCGAGATCTGCAAGAAGAGCTTCACGCGCAAGGAGCACTTTATGAATCACGTCATGTGGCATACCGGTGAAACGCCGCACCATTGTCAAATATGTGGAAAGAAGTATACTAGGAAGGAGCATTTAGTGAACCATATGCGATCCCATACAAATGATACACCGTTTAAATGCGAACTGTGCAGCAAGTCCTTCACCAGGAAGGAGCACTTCACCAATCACATATTGTGGCATACGGGTGAAACACCCCATCGCTGCGACTTCTGTTCAAAGACCTTCACACGCAAGGAACATTTACTCAACCACGTGCGTCAACACACCGGGGAATCGCCGCACCGGTGCAACTTCTGCGCGAAGTCATTTACGCGTCGCGAACATCTCGTGAACCACGTCCGACAGCATACCGGGGAAACGCCCTTCCAGTGTGGCTACTGCCCCAAAGCCTTCACCAGAAAGGATCATCTcgTGAACCACGTCCGTCAACACACCGGGGAATCCCCACACAAGTGTTCATACTGTACGAAGTCCTTTACACGCAAAGAGCATCTGACCAATCACGTACGCCAACATACCGGGGAGTCACCACATCGATGTACCTACTGCTCTAAGTCATTCACAAGAAAGGAACATCTTACCAATCATATTAGACAGCATACGGGGGAGACTCCCCACAAGTGCACGTATTGCCCGCGCGCGTTCTCCCGGAAGGAGCATCTGAATCAACACATCAGGCAACACACCGGGGACATGCCGCACACCTGCACATACTGCAGCAAGACCTTTACCAGGAAGGAGCATCTAGTTACTCATGTTCGGCAACACACTGGGGAGACACCATTCAAATGCCCATACTGTGCAAAGTCCTTCTCAAGAAAGGAACACCTCACAAACCACGTCCACCTTCACACTGGGGAAACTCCACACAAATGTCCTTTCTGCACTAAGACATTCTCCAGAAGGGAACATTTAACAAACCATGTTCGGATACACACGGGTGAATCTCCGCACAGGTGCGAGTTTTGTCAAAAGACGTTCACACGCAAAGAACACCTCACAAATCACATGAAACAGCACACAGGTGACACGCCACACGCGTGTAAAGTGTGCTCCAAGCATTTCACCAGAAAGGAGCATCTTGTTACTCATATGAgaTCACACAGTTGCGGCGACCGACCGTACAGTTGCGGTGAATGCGGGAAATCGTTCCCGTTGAAAGGCAACCTACTATTTCACGAACGGTCACACAAAAGTGGCAACACGAAACAATTCCGCTGCGAAATCTGCTCTAAGGAGTTCATGTGTAAAGgTCACTTGGTGTCCCATCGACGAACGCATTCGGACGGGGGCGATGGTGGGACGAATTCCGAACCGACTGCCGAGAACGAGGAATGCGGTGATTACGCCAAGTGTGAAGATACCACTGAAATGCCCGAGAGGAAACACGATATCCGAGCCACAATAGATAACAAAAGTAATGACAACACTGGGACGCAAACTCAGCTGAGTACTGTTATGCAAATAACAAGCCAACAACCAGTTAGAGCAGGTGCGGTTTCGAGCGCGGCGAGCGTTGCGGCCGGCACGTTTACACACACGGCCAGCAACCAGCACCACGCTGGCACGACCATTGCCCACCATCCCGTAACCGTGAACTACTAG
Protein Sequence: MNQDHHNINTGGGQPPTNSESQNARVQSAQQQQQQQQSNLTPTTSATDLRVNSAAVNVALSSVAKYWVFTNLFPGPLPQVSVYGLPGTRIENGKPVQDLGQAHASILNGDPNIILGHAGQPQVTVSAGGQQIPVSQIIATQAGHDGLVGHSQQQDASANTAQLAVAGQTSQQVPNNRVEFVQHHNIDMGHHSQQHLLQQQLMAAARPDHANQQIQLTVSEDGIVTVVEPGGGKLVDKEELHEAIKMPTDHTLTVHQLQQIVGHHQVIDSVVRIEQATGEPANILVTQNPDGTTSIETSAVDPLLVKDEKSVAKIDSAQFAIPADIKDIKGIDLKSAMGMEGAVVKISTGSEHDLHTMYKVNVEDLSQLLAYHEVFGKLSAEGQQQAKVINDVDVEVAGTSAAMSEAESSPGHHACDICGKIFQFRYQLIVHRRYHGESKPYTCQVCGSAFANAVELSKHGKCHLAGDPAERQAKRLAQDKPYACSTCHKTFSRKEHLDNHVRSHTGETPYRCQYCSKTFTRKEHMVNHVRKHTGETPHRCEICKKSFTRKEHFMNHVMWHTGETPHHCQICGKKYTRKEHLVNHMRSHTNDTPFKCELCSKSFTRKEHFTNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCNFCAKSFTRREHLVNHVRQHTGETPFQCGYCPKAFTRKDHLVNHVRQHTGESPHKCSYCTKSFTRKEHLTNHVRQHTGESPHRCTYCSKSFTRKEHLTNHIRQHTGETPHKCTYCPRAFSRKEHLNQHIRQHTGDMPHTCTYCSKTFTRKEHLVTHVRQHTGETPFKCPYCAKSFSRKEHLTNHVHLHTGETPHKCPFCTKTFSRREHLTNHVRIHTGESPHRCEFCQKTFTRKEHLTNHMKQHTGDTPHACKVCSKHFTRKEHLVTHMRSHSCGDRPYSCGECGKSFPLKGNLLFHERSHKSGNTKQFRCEICSKEFMCKGHLVSHRRTHSDGGDGGTNSEPTAENEECGDYAKCEDTTEMPERKHDIRATIDNKSNDNTGTQTQLSTVMQITSQQPVRAGAVSSAASVAAGTFTHTASNQHHAGTTIAHHPVTVNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00953726;
90% Identity: iTF_00642539; iTF_01017902; iTF_01018752; iTF_00205367;
80% Identity: -