Mach013683.2


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Morpho achilles
Gene Symbol
-
Assembly
GCA_947086495.1
Location
CAMTZB010000013.1:12192124-12218451[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 20 9.4e-05 0.0085 17.4 1.5 1 23 408 430 408 430 0.96
2 20 0.0075 0.68 11.4 0.6 1 20 436 455 436 458 0.94
3 20 1.1e-05 0.00096 20.3 3.3 1 23 477 499 477 499 0.98
4 20 0.0002 0.019 16.3 4.7 1 23 505 527 505 527 0.99
5 20 3.9e-05 0.0035 18.6 5.3 1 23 533 555 533 555 0.97
6 20 1.2e-05 0.0011 20.1 7.3 1 23 561 583 561 583 0.97
7 20 7.8e-07 7.1e-05 23.9 2.9 1 23 589 611 589 611 0.97
8 20 0.00011 0.01 17.1 6.7 1 23 617 639 617 639 0.97
9 20 0.00011 0.0099 17.2 6.5 1 23 645 667 645 667 0.97
10 20 5.3e-07 4.8e-05 24.4 1.9 1 23 673 695 673 695 0.98
11 20 1.1e-05 0.00095 20.4 7.7 1 23 701 723 701 723 0.98
12 20 3.8e-06 0.00034 21.8 7.6 1 23 729 751 729 751 0.98
13 20 9.3e-06 0.00084 20.5 5.5 1 23 757 779 757 779 0.98
14 20 0.00013 0.012 16.9 6.7 1 23 785 807 785 807 0.97
15 20 0.00012 0.011 17.0 7.3 1 23 813 835 813 835 0.97
16 20 4.1e-05 0.0037 18.5 6.0 1 23 841 863 841 863 0.98
17 20 6.2e-05 0.0056 17.9 7.8 1 23 869 891 869 891 0.97
18 20 4.8e-05 0.0043 18.3 7.4 1 23 897 919 897 919 0.96
19 20 0.00041 0.037 15.4 0.6 1 23 926 948 926 948 0.96
20 20 0.016 1.4 10.4 5.3 1 23 957 979 957 979 0.99

Sequence Information

Coding Sequence
ATGAATCCGGATCATCATAATATCAATACGGGTGGTGGCCAACCTCCAAGCAATTCAGAGCCCCAGAATCCGAGGGTGCAGTCAACGCAGCAGCAAGCTAATTTGACTCCTACGACATCTGCTACTGACTTACGGGTTAACTCAGCCGCCGTAAACGTAGCTTTGTCGAGCGTGGCCAAGTATTGGGTGTTTACAAATCTCTTTCCCGGTCCATTGCCGCAAGTTTCCGTCTACGGTTTACCCGGTACAAGAATTGAAAATGGAAAACCAGTTCAGGATCTTGGCCAGGCACATGCTAGTATACTTAACGGAGATCCCAATATTATATTGGGGCATGCGGGACAGCAGCAAGTCACTGTGTCTGCAGCAGGCCAACAGATTCCTGTCTCACAGATCATAGCAACACAAGCATCACAAGGACATGAAGGTCTGGTGGGTCACAACCAGCAACAAGAACCGTCGGCCAGCAACGCACAAATGGCAGTTGCCGGCCAGTCCCAGCAGGTACCCAATAATCGGGTCGACTTTGTACAACACCATAACATTGATATGGGTCATCACTCCCAACAGCACATTATGCAACAACAGTTAATGGCAGCAACACGTCCAGAACACGCCAACCAACAGATTCAGCTGACGGTAAGCGAAGATGGTATCGTGACCGTAGTGGAGCCGGGCGGGAAACTAGTTGACAAAGAGGATCTGCACGAGACAATTAAGATGCCCTCAGACCACACGCTTACCGTACACCAATTGCAGCAGATTGTAGGACATCATCAGGTCATAGACAGCGTTGTTCGCATCGAGCAAGCAACAGGTGAACCTGCCAATATTCTAGTGACGCAGAATCCAGACGGCACCACGTCAATCGAGACCAGCGGCGTTGACCCTCTCCTTGTGAAAGATGAGAAGAATAGTGCCAAAATTGAATCGGCACAATTCGCTATACCTGCTGACATTAAGGATATTAAGGGAATTGATTTGAAGAGTGCAATGGGAATGGAAGGAGCAGTAGTGAAAATATCAACTGGCACAGAGCACGATCTACACACTATGTACAAAGTGAATGTAGAAGATCTGTCCCAACTGCTGGCCTACCATGAAGTGTTTGGCAAACTCAGTGCCGAAGGGCAACAACAGGCTAAGGTGATAAATGAGGTAGGCGTTGAAGTGGCGGGCACGAGCGCAGCAATGGCCGAAGCGGAAACGTCGCCCGGACATCACGCCTGCGACATCTGCGGAAAGATATTCCAGTTCCGGTACCAGCTTATTGTACATAGacGATATCACGGCGAGAGCAAACCATACACATGTCAAGTTTGCGGATCTGCTTTTGCCAACGCGGTGGAATTGTCCAAACACGGCAAATGTCACCTTGCTGGTGACCCAGCCGAACGTCAAGCAAAGAGGTTAGCACAAGATAAGCCGTACGCGTGCTCTACGTGCCAAAAGACATTTTCCCGGAAGGAGCATCTCGACAACCATGTTAGGAGTCACACTGGCGAGACTCCTTACAGGTGTCAGTTCTGTGCGAAGACGTTCACCCGCAAGGAGCACATGGTGAACCACGTTCGCAAGCACACGGGCGAGACGCCGCATCGCTGCGAGATATGCAAGAAGAGCTTCACGCGCAAAGAGCACTTCATGAACCATGTCATGTGGCACACAGGTGAAACGCCGCACCATTGTCAAATTTGTGGAAAGAAGTATACTAGGAAGGAGCATTTAGTGAACCATATGCGGTCCCATACAAATGATACTCCGTTCAGATGCGAACTGTGCGGCAAGTCCTTCACGAGGAAGGAGCACTTCACCAATCACATATTGTGGCACACGGGCGAAACACCGCACCGGTGTGACTTCTGCTCGAAAACTTTCACTCGCAAGGAACATTTACTTAACCACGTCCGACAACATACCGGCGAGTCGCCTCATCGGTGCAACTTCTGTTCAAAGTCCTTCACTCGCCGCGAGCACCTTGTGAACCACGTGCGGCAGCACACGGGCGAAACGCCGTTCCAGTGTGGATACTGCCCTAAGGCGTTCACCAGGAAAGATCATTTAGTGAACCACGTCCGTCAGCACACAGGGGAGTCCCCGCACAAGTGCTCTTACTGCACTAAATCGTTCACGCGCAAGGAACACCTAACGAACCACGTGCGCCAACACACAGGGGAATCCCCGCATCGGTGTACTTACTGCTCCAAGTCCTTCACCAGGAAGGAGCATCTTACTAACCATATACGACAGCACACGGGTGAGACTCCCCACAAGTGCACCTTTTGCCCGCGCGCCTTCTCCCGGAAAGAGCATCTCAACCAACACATCAGGCAACACACTGGTGACATGCCACACACGTGCACCTTCTGCAGCAAGAGCTTTACGAGAAAGGAACACCTTGTTACACATGTTCGGCAACACACTGGGGAGACTCCATTCAAATGCACATTCTGTTCGAAGTCCTTCTCAAGAAAGGAACATCTTACGAACCACGTCCACCTACATACTGGAGAAACTCCACACAAATGTGCCTTCTGCACGAAAACATTCTCCAGAAGGGAACACCTAACAAACCATGTCAGAATACACACTGGCGAATCACCACATCGCTGTGAGTTCTGCCAAAAGACCTTCACTCGCAAAGAGCACTTGACGAACCATTTGAAGCAACATACTGGGGACACGCCACATGCATGCAAAGTGTGCTCTAAACACTTCACTAGGAAGGAGCATCTTGTTACGCATAtgagATCACATAGCTGCGGCGAACGACCATTCAGTTGCACCGAATGTGGCAAATCGTTCCCGTTAAAAGGCAACTTACTGTTTCACGAACGATCACACAAAAGCGGAAACGCCAACAAACATTTCCGCTGCGAAATCTGCTCTAAGGAATTTATGTGCAAAGGTCATTTAGTGTCCCATCGGCGAACGCATACTGAAGCGGGCGAAAACCCAACCAATACAGAGCCAACAACTGAGAACGAAGACTGTGGTGACTATACGAAGTGCGAAAAGGATGCTGCTGAGATGCCAGAGAGAAAACATGAAATCAGAGTAACCGCTGACAACAGAACTGCTGAATCAAATACGACGCAAACACAACTGAGTACTGTAATGCAAATCACTAGCcagCAACCTGTCCGATCAGGAACCGCAACCAGTGCGGCGAGCGTGGCAACCGGTACTTTCACCCACGCGGCCAACGCCCAGCACCACGCTGGCACTACGATTGCCCATCATCCTGTCACTGTGAATTACTAG
Protein Sequence
MNPDHHNINTGGGQPPSNSEPQNPRVQSTQQQANLTPTTSATDLRVNSAAVNVALSSVAKYWVFTNLFPGPLPQVSVYGLPGTRIENGKPVQDLGQAHASILNGDPNIILGHAGQQQVTVSAAGQQIPVSQIIATQASQGHEGLVGHNQQQEPSASNAQMAVAGQSQQVPNNRVDFVQHHNIDMGHHSQQHIMQQQLMAATRPEHANQQIQLTVSEDGIVTVVEPGGKLVDKEDLHETIKMPSDHTLTVHQLQQIVGHHQVIDSVVRIEQATGEPANILVTQNPDGTTSIETSGVDPLLVKDEKNSAKIESAQFAIPADIKDIKGIDLKSAMGMEGAVVKISTGTEHDLHTMYKVNVEDLSQLLAYHEVFGKLSAEGQQQAKVINEVGVEVAGTSAAMAEAETSPGHHACDICGKIFQFRYQLIVHRRYHGESKPYTCQVCGSAFANAVELSKHGKCHLAGDPAERQAKRLAQDKPYACSTCQKTFSRKEHLDNHVRSHTGETPYRCQFCAKTFTRKEHMVNHVRKHTGETPHRCEICKKSFTRKEHFMNHVMWHTGETPHHCQICGKKYTRKEHLVNHMRSHTNDTPFRCELCGKSFTRKEHFTNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCNFCSKSFTRREHLVNHVRQHTGETPFQCGYCPKAFTRKDHLVNHVRQHTGESPHKCSYCTKSFTRKEHLTNHVRQHTGESPHRCTYCSKSFTRKEHLTNHIRQHTGETPHKCTFCPRAFSRKEHLNQHIRQHTGDMPHTCTFCSKSFTRKEHLVTHVRQHTGETPFKCTFCSKSFSRKEHLTNHVHLHTGETPHKCAFCTKTFSRREHLTNHVRIHTGESPHRCEFCQKTFTRKEHLTNHLKQHTGDTPHACKVCSKHFTRKEHLVTHMRSHSCGERPFSCTECGKSFPLKGNLLFHERSHKSGNANKHFRCEICSKEFMCKGHLVSHRRTHTEAGENPTNTEPTTENEDCGDYTKCEKDAAEMPERKHEIRVTADNRTAESNTTQTQLSTVMQITSQQPVRSGTATSAASVATGTFTHAANAQHHAGTTIAHHPVTVNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00953726;
90% Identity
iTF_01151387;
80% Identity
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