Basic Information

Insect: Elymnias hypermnestra
Gene Symbol: -
Assembly: GCA_015832385.1
Location: JACTOM010000006.1:1803279-1825717[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 9.1e-05 0.0074 17.4 1.5 1 23 418 440 418 440 0.96

2 20 0.0072 0.58 11.4 0.6 1 20 446 465 446 468 0.94

3 20 2.3e-05 0.0019 19.2 5.4 1 23 487 509 487 509 0.98

4 20 2.6e-05 0.0021 19.1 4.5 1 23 515 537 515 537 0.99

5 20 3.7e-05 0.003 18.6 5.3 1 23 543 565 543 565 0.97

6 20 1.8e-05 0.0015 19.6 7.2 1 23 571 593 571 593 0.97

7 20 7.6e-07 6.1e-05 23.9 2.9 1 23 599 621 599 621 0.97

8 20 0.00011 0.0087 17.1 6.7 1 23 627 649 627 649 0.97

9 20 3.3e-05 0.0027 18.7 6.6 1 23 655 677 655 677 0.98

10 20 5.2e-07 4.2e-05 24.4 1.9 1 23 683 705 683 705 0.98

11 20 5.3e-05 0.0042 18.1 7.9 1 23 711 733 711 733 0.98

12 20 1.9e-05 0.0015 19.5 7.8 1 23 739 761 739 761 0.98

13 20 1.7e-06 0.00014 22.8 5.3 1 23 767 789 767 789 0.98

14 20 2.4e-05 0.002 19.2 6.5 1 23 795 817 795 817 0.97

15 20 0.00012 0.0096 17.0 7.3 1 23 823 845 823 845 0.97

16 20 4.9e-06 0.00039 21.4 5.9 1 23 851 873 851 873 0.98

17 20 6e-05 0.0048 17.9 7.8 1 23 879 901 879 901 0.97

18 20 2.6e-05 0.0021 19.1 7.5 1 23 907 929 907 929 0.96

19 20 0.00077 0.062 14.4 0.3 1 23 936 958 936 958 0.96

20 20 0.17 14 7.1 4.1 1 23 967 989 967 989 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	9.1e-05	0.0074	17.4	1.5	1	23	418	440	418	440	0.96
2	20	0.0072	0.58	11.4	0.6	1	20	446	465	446	468	0.94
3	20	2.3e-05	0.0019	19.2	5.4	1	23	487	509	487	509	0.98
4	20	2.6e-05	0.0021	19.1	4.5	1	23	515	537	515	537	0.99
5	20	3.7e-05	0.003	18.6	5.3	1	23	543	565	543	565	0.97
6	20	1.8e-05	0.0015	19.6	7.2	1	23	571	593	571	593	0.97
7	20	7.6e-07	6.1e-05	23.9	2.9	1	23	599	621	599	621	0.97
8	20	0.00011	0.0087	17.1	6.7	1	23	627	649	627	649	0.97
9	20	3.3e-05	0.0027	18.7	6.6	1	23	655	677	655	677	0.98
10	20	5.2e-07	4.2e-05	24.4	1.9	1	23	683	705	683	705	0.98
11	20	5.3e-05	0.0042	18.1	7.9	1	23	711	733	711	733	0.98
12	20	1.9e-05	0.0015	19.5	7.8	1	23	739	761	739	761	0.98
13	20	1.7e-06	0.00014	22.8	5.3	1	23	767	789	767	789	0.98
14	20	2.4e-05	0.002	19.2	6.5	1	23	795	817	795	817	0.97
15	20	0.00012	0.0096	17.0	7.3	1	23	823	845	823	845	0.97
16	20	4.9e-06	0.00039	21.4	5.9	1	23	851	873	851	873	0.98
17	20	6e-05	0.0048	17.9	7.8	1	23	879	901	879	901	0.97
18	20	2.6e-05	0.0021	19.1	7.5	1	23	907	929	907	929	0.96
19	20	0.00077	0.062	14.4	0.3	1	23	936	958	936	958	0.96
20	20	0.17	14	7.1	4.1	1	23	967	989	967	989	0.98

Sequence Information

Coding Sequence: ATGAACCAGGATCACCATAGTATTAGTTCGGGTGGTGGCCAACCTCCAAACAATTCAGAGTCCCAAAACGCAAGAGTTCAATCTACACAGCAACAACAACAACAGCAAGCTAATTTAACACCTACAACATCTGCTACTGACTTGAGAGTTAACTCTGCAGCTGTAAACGTCGCTCTGTCGAGCGTGGCTAAATATTGGGTGTTTACAAATCTCTTTCCCGGCCCCATACCGCAGGTTTCCGTCTATGGATTACCTGGTACAAGAATTGAAAATGGAAAACCAGTACAGGACCTTGGGCAAGCACATGCTAGTATACTGAATGGTGACCCCAACATTATATTGGGGCATGCAGGGCAGCAGCAGGTCACTGTATCTGCAGCGGGACAACAGATTCCTGTCTCACAGATCATTGCCACACAGGCAACCCAAGGACATGatGGTTTGGTGGGACATGGTCAGCAACAAGATGCGACAGCGGGTACTGCACAATTGGCTGTTGCAGGCCAGACATCCCAGCAGGTAGCCAATAATCGGGTCGACTTTGTACAACACCATAACATTGATATGGTAAATCATGTGGGTCATCATTCACAGCAACATATCATGCAGCAACAGTTAATGGCGGCGGCTCGTCCAGACCACGCTAATCAACAGATACAACTTACTGTGAGCGAGGATGGCATCGTGACTGTAGTGGAACCGGCGGGCGGAAAACTTGTTGATAAGGAAGAACTGCATGAGACAATTAAGATGCCCTCAGACCACACCCTCACAGTGCATCAGTTGCAGCAGATTGTAGGACATCATCAGgttATAGACAGCGTGGTGCGCATAGAGCAAGCGACTGGAGAGCAAGCAAATATACTCGTCACACAAAACCCAGATGGTACCACTTCTATTGAAACCAGTGCAGTTGACCCCTTGCTCATTAAAGAAGAGAAAAGCGGCGCTAAAATCGAGTCGGCACAGTTCGCTATACCTGCCGAAATCAAAGATATCAAGGGAATCGATTTGAAGAGTGCAATGGGTATGGAAGGGGCAGTGGTGAAAATATCAACTGGCTCAGAGCATGATCTCCATACCATGTACAAGGTTAATGTGGAAGATCTGTCACAACTCTTGGCATATCATGAAGTGTTTGGAAAACTCAGTGCCGAAGGACAGCAACAAACCAAGGTCATGAATGAAGTGGATGTTGAAGTAGCCGGTACCAGCACTGCAATGTCTGAAGCAGAGACATCACCTGGACACCATGCCTGCGACATTTGTGGAAAGATATTCCAATTTCGTTACCAGCTTATTGTTCACAGACGATATCACGGTGAAAGCAAACCATACACATGCCAAGTATGTGGCTCAGCATTTGCCAATGCGGTTGAGTTATCAAAGCACGGAAAATGTCACTTGGcCGGCGATCCAGCTGAGCGCCAAGCGAAGAGGTTGGCTCAAGACAAACCGTATGCATGTTCCACGTGTCACAAGACATTTTCAAGGAAAGAGCATCTTGACAACCACGTGAGGAGTCACACCGGAGAGACCCCTTACAGGTGTCAGTTCTGCGCGAAGACGTTCACTCGCAAGGAGCATTTAGTGAACCACGTGAGAAAACACACGGGCGAAACTCCGCACCGCTGCGAGATATGCAAGAAAAGCTTTACTCGCAAAGAACACTTCATGAACCACGTTATGTGGCATACCGGTGAAACGCCGCACCATTGCCAAATTTGCGGAAAGAAGTATACTAGAAGGGAGCATTTAGTGAATCATATGAGGTCACATACGAATGATACCCCGTTCAGATGCGAACTGTGTGGCAAGTCCTTCACGAGAAAGGAACACTTCACCAATCACATATTGTGGCATACTGGTGAAACTCCACATCGCTGTGACTTCTGCTCGAAGACTTTCACAAGGAAGGAACATTTACTTAATCACGTGCGGCAACACACCGGAGAATCGCCTCATCGATGCAACTTCTGTTCCAAGTCCTTCACCCGCCGCGAACACCTGGTGAATCATATTAGACAGCATACCGGAGAAACTCCGTTTCAATGCGGATACTGTCCCAAAGCTTTCACCAGGAAGGATCATCTTGTGAACCATGTCCGACAGCATACAGGGGAATCACCACACAAGTGCTCATTCTGCACGAAATCATTTACACGAAAGGAACACCTGACTAACCATGTCCGCCAACACACCGGGGAATCCCCACATCGATGTACATTCTGTTCGAAGTCATTCACAAGGAAGGAGCATCTTACAAATCACATCAGACAGCATACGGGTGAGACTCCCCATAAGTGCACGTACTGCCCGCGCGCTTTCTCGCGGAAGGAACATCTCAACCAACACATCAGGCAACACACTGGTGACATGCCGCACACCTGCACATACTGCAGCAAGAGCTTCACCAGGAAAGAACACCTTGTCACTCACGTCAGGCAACACACTGGCGAGACACCGTTTAAATGCACATTCTGTTCGAAGTCCTTCTCAAGAAAAGAGCACCTCACCAACCATGTCCATCTGCACACTGGAGAAACACCACACAAATGTCCGTTCTGCACAAAGACATTCTCCAGAAGAGAACATTTAACCAATCATGTCCGaATACACACTGGAGAATCGCCCCATCGTTGTGAATTTTGTCAAAAGACTTTCACTCGCAAAGAGCATTTAACAAATCATTTAAAGCAACACACGGGAGACACCCCACACGCTTGCAAAATTTGCTCCAAGCACTTCACTAGGAAGGAACATCTAGTAACACATATGAGATCGCACAGTTGCGGTGAACGACCCTTTAGCTGTGGGGAATGTGGGAAGTCGTTCCCTTTGAAAGGGAATCTATTGTTCCACGAACGATCACACAAAAGCGGCAATGCGAACAAACATTTCCGTTGTGAAGTCTGCTCTAAGGAATTCTTGTGCAAAGGTCACTTAGTGGCACATCGACGAACGCACTCGGAGGGCGGCGATAATGCCACTAATACGGAACCAGCTACTGAAAACGAGGATTGTGGTGATTATTCAAAGTGCGAGAAGGATGCCACTGAGATACCTGAACGAAAACACGACGTGAGAGTTACAACAGTAACTGAAAACAACACAGCCCAAACACAACTCAGTACTGTTATGCAAATAACGAGTCAGCAACCAGTTATTACGGGCACTGCAACCAGTGCGGCGAACGTACAACCTGGGACGTTCACGCACACTGCCAGTGGCCAACACCACACAGGGACAACGATTGCCCACCATCCAGTCACTGTGAATTACTAG
Protein Sequence: MNQDHHSISSGGGQPPNNSESQNARVQSTQQQQQQQANLTPTTSATDLRVNSAAVNVALSSVAKYWVFTNLFPGPIPQVSVYGLPGTRIENGKPVQDLGQAHASILNGDPNIILGHAGQQQVTVSAAGQQIPVSQIIATQATQGHDGLVGHGQQQDATAGTAQLAVAGQTSQQVANNRVDFVQHHNIDMVNHVGHHSQQHIMQQQLMAAARPDHANQQIQLTVSEDGIVTVVEPAGGKLVDKEELHETIKMPSDHTLTVHQLQQIVGHHQVIDSVVRIEQATGEQANILVTQNPDGTTSIETSAVDPLLIKEEKSGAKIESAQFAIPAEIKDIKGIDLKSAMGMEGAVVKISTGSEHDLHTMYKVNVEDLSQLLAYHEVFGKLSAEGQQQTKVMNEVDVEVAGTSTAMSEAETSPGHHACDICGKIFQFRYQLIVHRRYHGESKPYTCQVCGSAFANAVELSKHGKCHLAGDPAERQAKRLAQDKPYACSTCHKTFSRKEHLDNHVRSHTGETPYRCQFCAKTFTRKEHLVNHVRKHTGETPHRCEICKKSFTRKEHFMNHVMWHTGETPHHCQICGKKYTRREHLVNHMRSHTNDTPFRCELCGKSFTRKEHFTNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCNFCSKSFTRREHLVNHIRQHTGETPFQCGYCPKAFTRKDHLVNHVRQHTGESPHKCSFCTKSFTRKEHLTNHVRQHTGESPHRCTFCSKSFTRKEHLTNHIRQHTGETPHKCTYCPRAFSRKEHLNQHIRQHTGDMPHTCTYCSKSFTRKEHLVTHVRQHTGETPFKCTFCSKSFSRKEHLTNHVHLHTGETPHKCPFCTKTFSRREHLTNHVRIHTGESPHRCEFCQKTFTRKEHLTNHLKQHTGDTPHACKICSKHFTRKEHLVTHMRSHSCGERPFSCGECGKSFPLKGNLLFHERSHKSGNANKHFRCEVCSKEFLCKGHLVAHRRTHSEGGDNATNTEPATENEDCGDYSKCEKDATEIPERKHDVRVTTVTENNTAQTQLSTVMQITSQQPVITGTATSAANVQPGTFTHTASGQHHTGTTIAHHPVTVNY*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00953726;
90% Identity: iTF_01151387;
80% Identity: -