Bany018043.2


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Bicyclus anynana
Gene Symbol
-
Assembly
GCA_947172395.1
Location
OX359215.1:12204527-12229739[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 22 9.7e-05 0.0053 17.3 1.5 1 23 414 436 414 436 0.96
2 22 0.0077 0.42 11.3 0.6 1 20 442 461 442 464 0.94
3 22 2.5e-05 0.0014 19.2 5.4 1 23 483 505 483 505 0.98
4 22 1.8e-05 0.001 19.6 5.6 1 23 511 533 511 533 0.99
5 22 4e-05 0.0022 18.5 5.3 1 23 539 561 539 561 0.97
6 22 1.3e-05 0.0007 20.1 7.3 1 23 567 589 567 589 0.97
7 22 8.4e-06 0.00045 20.7 3.8 1 23 595 617 595 617 0.97
8 22 0.00011 0.0062 17.1 6.7 1 23 623 645 623 645 0.97
9 22 0.00011 0.0062 17.1 6.5 1 23 651 673 651 673 0.97
10 22 0.00058 0.031 14.9 0.6 1 16 679 694 679 696 0.95
11 22 0.00047 0.025 15.2 0.4 1 16 704 719 704 720 0.96
12 22 0.62 34 5.4 1.4 9 23 720 734 718 734 0.92
13 22 1.1e-05 0.00059 20.3 7.7 1 23 740 762 740 762 0.98
14 22 2.8e-06 0.00015 22.1 7.5 1 23 768 790 768 790 0.98
15 22 9.6e-06 0.00052 20.5 5.5 1 23 796 818 796 818 0.98
16 22 0.00017 0.0091 16.6 6.9 1 23 824 846 824 846 0.97
17 22 5.7e-05 0.0031 18.0 6.1 1 23 852 874 852 874 0.97
18 22 5.2e-06 0.00028 21.3 5.9 1 23 880 902 880 902 0.98
19 22 6.4e-05 0.0035 17.9 7.8 1 23 908 930 908 930 0.97
20 22 4.9e-05 0.0027 18.2 7.4 1 23 936 958 936 958 0.96
21 22 0.00082 0.045 14.4 0.3 1 23 965 987 965 987 0.96
22 22 0.017 0.9 10.3 5.3 1 23 995 1017 995 1017 0.99

Sequence Information

Coding Sequence
ATGAATCCGGATCACCATAGTATAAATACGGGTGGTGGCCAACCTCCATCCAATTCAGAGTCTCAGAGTGCGAGGGTACAGGCGGCGCAGCAGCAAGCTAACTTGACGCCCACGACATCTGCTACAGACTTGAGAGTCAACTCTGCAGCTGTGAACGTTGCTTTGTCGAGCGTGGCCAAGTACTGGGTGTTTACAAACCTCTTCCCCGGCCCACTGCCACAGGTTTCCGTCTACGGCTTACCTGGTACGAGGATTGAAAATGGGAAACCAGTTCAGGATCTTGGCCAAGCTCACGCTAGTATACTGAATGGAGACCCCAACATTATACTGGGCCACGCTGGTCATACCGGCCACGCTGGCCAGCCTCAGGTCACAGTGTCAGCTTCGGGACAGCAGATTCCTGTGTCTCAGATCATTGCTACACAAGCAGGACATGATGGTCTGGTGGGTCACAGCCATCAGCAAGAGCCATCGGGGAGCACAGCACAGCTGTCGGTCTCGGGGCAGACTTCCCAGCAGGTACCCAATAACCGGGTCGAATTTGTACAACACCATAACATTGATATGGGACACCATTCTCAACAACATCTCCTACAGCAACAGTTGATGGCTGCTGCGCGACCAGAACACGCTAATCAACAGATCCAACTCACTGTAAGTGAAGACGGCATAGTGACTGTGGTGGAGCCGGGCAGTGGGAAGCTGGTGGACAAGGAAGATCTGCATGAGACTATCAAGATGCCCTCTGACCACACTCTCACTGTGCACCAGTTGCAACAGATAGTGGGTCATCATCAGGTGATCGACAGCGTCGTCCGTATCGAACAAGCCACAGGCGAACCGGCCAACATCCTTGTGACCCAAAACCCAGATGGCACCACATCCATAGAGACCAGTGCGGTCGACCCGCTCCTCGTCAAAGATGAGAAGAACGGCTCTAAGATAGAGTCTGCACAGTTCGCCATACCTGCCGAGATAAAGGATATCAAGGGAATCGATTTGAAGAGTGCAATGGGTATGGAGGGTGCGGTGGTGAAGATATCTACTGGCTCTGAACACGATCTGCACACCATGTACAAAGTGAATGTGGAGGATCTGTCGCAGCTGCTCGCCTACCATGAGGTGTTCGGCAAACTGAGCGCAGAAGGACAGCAGCAAAATAAGGTGATAAACGACGTGGAGGTGGAGGTGGCGGGCCCGAGCGCGGCGATGTCCGAGGCCGAGTCTTCGCCCGGACACCACGCGTGCGACATCTGCGGGAAGATATTCCAGTTCCGCTACCAGCTCATCGTTCACAGACGGTATCACGGCGAGAGCAAACCTTATACGTGTCAAGTTTGCGGGTCCGCTTTTGCCAATGCAGTTGAACTATCGAAACATGGAAAATGTCATCTCGCGGGTGACCCAGCCGAACGTCAAGCGAAGAGGCTGGCCCAAGACAAGCCATATGCGTGCTCCACGTGCCACAAGACCTTCTCGCGGAAGGAGCATCTTGACAACCACGTGCGGAGTCACACCGGGGAAACTCCTTACAGATGCCAGTACTGCTCGAAGACGTTCACCCGCAAGGAGCACATGGTGAACCACGTGCGCAAGCACACGGGCGAGACGCCGCACCGCTGCGAGATCTGCAAGAAGAGCTTCACGCGCAAGGAGCACTTCATGAACCACGTCATGTGGCACACCGGTGAAACGCCGCACCATTGTCAAATATGCGGAAAGAAGTATACTAGGAAGGAGCATTTAGTGAACCATATGCGATCCCATACAAACGATACACCGTTCAAATGTGAACTGTGCAGCAAGTCCTTCACCAGGAAGGAGCACTTCACCAATCACATATTGTGGCATACTGGTGAAACGCCCCACCGTTGTGACTTCTGTTCAAAGACATTTACACGCAAGGAGCACTTGCTCAACCACGTGCGTCAACACACCGGCGAGTCGCCGCACCGATGCAACTTCTGCTCTAAGTCCTTCACACGCCGCGAACACCTGGTGAACCACGTCAGACAGCATACCGGGGAGACGCCCTTCCAGTGCGGATACTGTCCTAAAGCCTTCACGAGAAAGGATCACCTTGGTAAGTTCTACCGGAATAACACTCCTTTCCAATGTGGATACTGTCCTAAAGCCTTCACGAGAAAGGATCACCTTGCCTTCACAAGAAAGGATCACTTTGTGAACCACGTCCGTCAACACACCGGGGAGTCCCCGCACAAGTGTTCTTACTGCACGAAGTCATTCACGCGCAAGGAACATCTGACCAATCACGTGCGCCAACACACCGGGGAGTCCCCTCATCGGTGTAATTACTGTTCGAAGTCGTTCACTAGAAAGGAACATCTCACTAATCATATTAGACAGCATACGGGGGAGACTCCCCACAAGTGTACGTTCTGCCCGCGCGCGTTCTCCCGGAAGGAGCATCTGAACCAACACATCAGGCAGCACACTGGTGACATGCCGCACACCTGCACGTTCTGCAGCAAGACCTTTACTAGGAAGGAGCACCTTGTTACACATGTTCGGCAACACACCGGGGAGACGCCATTCAAATGCACGTACTGTGCAAAGTCCTTCTCAAGGAAGGAGCACCTCACCAACCACGTCCACCTCCACACGGGGGAGACACCACACAAATGTCCTTTTTGCACCAAGACATTCTCCAGACGGGAACATTTAACCAATCATGTCCGGATACACACGGGCGAGTCGCCGCACCGCTGCGAGTTCTGTCAGAAGACGTTCACGCGCAAGGAGCACCTCACGAACCACCTCAAGCAGCACACGGGCGACACGCCGCACGCGTGCAAAGTGTGCTCCAAGCACTTCACCAGGAAGGAGCACCTTGTCACGCACATGAGGTCTCACAGTTGCGGCGACCGTCCGTTCAGCTGTGGCGAGTGCGGCAAGTCGTTCCCGCTGAAGGGCAACCTGCTGTTCCACGAGCGCTCGCACAAGAGCGGCAACAACAAGAACTTCCGCTGCGAAATCTGCTCCAAGGAGTTCATGTGCAAAGGTCACTTGGTGTCTCACCGGCGAACGCATAACGAGGCGGGAGACGCGGGGACGATTTCGGAGTCGGTGGCTGAAAACGAGGACTGCGGCGACTACTCCAAGTGCGAGGACACCAACGAAATACCAGAGAGGAAACACGATATCAGAGCTACAGTAGACAACAGAAATGACGGCACAGGAACACAAACACAACTGAGTACTGTAATGCAGATAACGAGCCAGCAACCAGTGAGAGCGGGAACGGTGACCAGTGCGGCGAGTGTAGCGCCTGGGTCTTTCACCCACACAGCCGGCAACCAGCACCACGCGGGCACGACCATCGCCCACCATCCCGTCACCGTGAACTACTAG
Protein Sequence
MNPDHHSINTGGGQPPSNSESQSARVQAAQQQANLTPTTSATDLRVNSAAVNVALSSVAKYWVFTNLFPGPLPQVSVYGLPGTRIENGKPVQDLGQAHASILNGDPNIILGHAGHTGHAGQPQVTVSASGQQIPVSQIIATQAGHDGLVGHSHQQEPSGSTAQLSVSGQTSQQVPNNRVEFVQHHNIDMGHHSQQHLLQQQLMAAARPEHANQQIQLTVSEDGIVTVVEPGSGKLVDKEDLHETIKMPSDHTLTVHQLQQIVGHHQVIDSVVRIEQATGEPANILVTQNPDGTTSIETSAVDPLLVKDEKNGSKIESAQFAIPAEIKDIKGIDLKSAMGMEGAVVKISTGSEHDLHTMYKVNVEDLSQLLAYHEVFGKLSAEGQQQNKVINDVEVEVAGPSAAMSEAESSPGHHACDICGKIFQFRYQLIVHRRYHGESKPYTCQVCGSAFANAVELSKHGKCHLAGDPAERQAKRLAQDKPYACSTCHKTFSRKEHLDNHVRSHTGETPYRCQYCSKTFTRKEHMVNHVRKHTGETPHRCEICKKSFTRKEHFMNHVMWHTGETPHHCQICGKKYTRKEHLVNHMRSHTNDTPFKCELCSKSFTRKEHFTNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCNFCSKSFTRREHLVNHVRQHTGETPFQCGYCPKAFTRKDHLGKFYRNNTPFQCGYCPKAFTRKDHLAFTRKDHFVNHVRQHTGESPHKCSYCTKSFTRKEHLTNHVRQHTGESPHRCNYCSKSFTRKEHLTNHIRQHTGETPHKCTFCPRAFSRKEHLNQHIRQHTGDMPHTCTFCSKTFTRKEHLVTHVRQHTGETPFKCTYCAKSFSRKEHLTNHVHLHTGETPHKCPFCTKTFSRREHLTNHVRIHTGESPHRCEFCQKTFTRKEHLTNHLKQHTGDTPHACKVCSKHFTRKEHLVTHMRSHSCGDRPFSCGECGKSFPLKGNLLFHERSHKSGNNKNFRCEICSKEFMCKGHLVSHRRTHNEAGDAGTISESVAENEDCGDYSKCEDTNEIPERKHDIRATVDNRNDGTGTQTQLSTVMQITSQQPVRAGTVTSAASVAPGSFTHTAGNQHHAGTTIAHHPVTVNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00953726;
90% Identity
iTF_01151387;
80% Identity
-