Basic Information

Insect: Papilio protenor
Gene Symbol: -
Assembly: GCA_029286645.1
Location: JAGSMZ010000018.1:3005411-3018836[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 7e-05 0.0061 17.4 2.2 1 23 428 450 428 450 0.97

2 20 0.00082 0.072 14.1 0.7 1 20 456 475 456 478 0.94

3 20 1.8e-05 0.0016 19.3 4.4 1 23 497 519 497 519 0.98

4 20 0.00016 0.014 16.3 4.7 1 23 525 547 525 547 0.99

5 20 3.2e-05 0.0028 18.5 5.3 1 23 553 575 553 575 0.97

6 20 0.001 0.087 13.8 10.1 1 23 581 603 581 603 0.97

7 20 8.4e-07 7.4e-05 23.5 2.7 1 23 609 631 609 631 0.97

8 20 8.9e-05 0.0078 17.1 6.7 1 23 637 659 637 659 0.97

9 20 0.00029 0.026 15.5 5.5 1 23 665 687 665 687 0.97

10 20 4.3e-07 3.7e-05 24.4 1.9 1 23 693 715 693 715 0.98

11 20 1.1e-05 0.00092 20.0 7.9 1 23 721 743 721 743 0.98

12 20 4.4e-05 0.0038 18.1 6.3 1 23 749 771 749 771 0.98

13 20 2.1e-05 0.0018 19.1 6.6 1 23 777 799 777 799 0.98

14 20 8.5e-06 0.00074 20.3 4.9 1 23 805 827 805 827 0.97

15 20 7.8e-05 0.0068 17.3 7.2 1 23 833 855 833 855 0.97

16 20 1.1e-05 0.00093 20.0 5.8 1 23 861 883 861 883 0.98

17 20 2.3e-06 0.0002 22.2 6.1 1 23 889 911 889 911 0.97

18 20 4.5e-06 0.00039 21.2 3.7 1 23 917 939 917 939 0.96

19 20 0.00048 0.042 14.8 0.3 1 23 946 968 946 968 0.96

20 20 0.0022 0.19 12.8 4.5 1 23 977 999 977 999 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	7e-05	0.0061	17.4	2.2	1	23	428	450	428	450	0.97
2	20	0.00082	0.072	14.1	0.7	1	20	456	475	456	478	0.94
3	20	1.8e-05	0.0016	19.3	4.4	1	23	497	519	497	519	0.98
4	20	0.00016	0.014	16.3	4.7	1	23	525	547	525	547	0.99
5	20	3.2e-05	0.0028	18.5	5.3	1	23	553	575	553	575	0.97
6	20	0.001	0.087	13.8	10.1	1	23	581	603	581	603	0.97
7	20	8.4e-07	7.4e-05	23.5	2.7	1	23	609	631	609	631	0.97
8	20	8.9e-05	0.0078	17.1	6.7	1	23	637	659	637	659	0.97
9	20	0.00029	0.026	15.5	5.5	1	23	665	687	665	687	0.97
10	20	4.3e-07	3.7e-05	24.4	1.9	1	23	693	715	693	715	0.98
11	20	1.1e-05	0.00092	20.0	7.9	1	23	721	743	721	743	0.98
12	20	4.4e-05	0.0038	18.1	6.3	1	23	749	771	749	771	0.98
13	20	2.1e-05	0.0018	19.1	6.6	1	23	777	799	777	799	0.98
14	20	8.5e-06	0.00074	20.3	4.9	1	23	805	827	805	827	0.97
15	20	7.8e-05	0.0068	17.3	7.2	1	23	833	855	833	855	0.97
16	20	1.1e-05	0.00093	20.0	5.8	1	23	861	883	861	883	0.98
17	20	2.3e-06	0.0002	22.2	6.1	1	23	889	911	889	911	0.97
18	20	4.5e-06	0.00039	21.2	3.7	1	23	917	939	917	939	0.96
19	20	0.00048	0.042	14.8	0.3	1	23	946	968	946	968	0.96
20	20	0.0022	0.19	12.8	4.5	1	23	977	999	977	999	0.99

Sequence Information

Coding Sequence: ATGAATACAGAACATCATAGTATCAATACGGGTGGTGGCCAACCTCCTGGTAACTCAGAGTCTCAAAATCAAAGAGTATCATCTTCTCAGCAACAACAATCAAACAATAATCTGCCTCCCACTACTTCTGCTACCGACCTACGAGTTAATTCGGCAGCTGTTAACGTTGCTTTGTCCAGTGTCGCTAAGTATTGGGTGTTTACAAATCTTTTTCCCGGGCCAATACCTCAAGTTTCCGTGTATGGACTCCCACCTAATGCAAGACTTGAAAATGGAAAACCTGTGCAGGAACTAGGCCAAGCCCACACTGGACTTCTGAATGGTGATCCTAACCTTATTCTCGGTCAGCACGGTGGGCAACCGCTATCGGTATCAGGACCAAGTGGTCAACAAATACCCGTCACACAAATTATTGCAACACAGTTGCAATCCGGACAGTCGCATGaaTCATTGGGGGCGCACGGTCAGCAGCAAGATCACAGCCAGCAGAACCCTGGCAACACAAGCCAAGGCTCGGTTAGCACGAGTCAGCCCTCGCACCAGCAGGTACCCAATAACCGGGTCGACTTTATACAACACCATAACACTGATATGGTAAATTATGTGGGTCATCATTCCCAACAACATTCAATGCAGCAACAACAGCTGATGTCTGCCAATCGGGACCACACAAATCAACAGATACAGCTAACAGTGAGTGAAGATGGCATTGTGACTGTGGTGGAACCGGGCGGAGGCAAGGTTGTGGACAAAGAGGAGATGCATGACGCCATCAAGATGCCAACAGACCATACCCTGACTGTTCATCAGCTGCAACAGATTGTTGGACATCATCagGTGATAGACAGCGTTGTTCGTATAGAACAAGCAACAGGCGAACCCGCTAATATACTTGTGACACAAAACCCCGATGGGACCACATCTATAGAGACCAGCGCATCTGAACAGCTTATAGTGAAAGATGAGAAAAATGTTGCAAAAATTGAATCTACACAATTTGCAATACCCACAGATATTAAGGACATCAAGGGGCTTGACTTAAAGAATGTGGGAACAATGGGTATGGAGGGAGCGGTTGTGAAAATTTCAGCGGGCGCTTCAGAACATGACTTGCATGCAATGTATAAAGTTAATGTTGAGGACCTCTCTCATCTGTTGGCTTACCATGAAGTTTTTGGTAAACTCAATCCCGAGGGGCAACCACAACCCAAGCCTATAAACGAAGTGGATGAAGCGGGAACAAGTGCTGCCATAGCTGAATCTGATACTTCGCCCGGACACCACTCCTGTGATATCTGCGGGAAGATTTTCCAGTTCCGATACCAACTTATTGTACACAGACGATACCACGGCGAGAGCAAACCTTACACATGTCAAGTTTGTGGCACCGCATTCGCTAATGCCATGGAACTTTCCAGACACGGAAAATGTCATCTTGCCGGAGACCCCTCAGAGAGACAAACTAAACGGCTGACTCAAGACAAGCCATACGCCTGCACAACTTGCCATAAAGCGTTCTCACGTAAGGAACACTTGGACAATCATGTTCGAAGCCACACTGGGGAAACGCCTTACAGatgtcAGTTCTGCGCGAAGACGTTCACGCGCAAGGAGCACATGGTGAACCACGTGCGCAAGCACACGGGCGAGACGCCGCACCGCTGCGACATCTGCAAGAAGAGCTTCACCCGCAAGGAGCACTTCATGAACCACGTCATGTGGCACACAGGTGAAACGCCGCATCATTGTCACATATGTTTGAAGAAGTATACTAGGAAGGAGCATTTAGTGAACCATATGCGATCTCACACGAACGACACACCGTTCCGATGTGAGTTGTGTGGCAAGTCCTTCACCAGAAAGGAACACTACACCAATCACATTCTCTGGCATACTGGCGAAACACCGCATCGTTGCGACTTCTGTTCGAAAACGTTCACCCGCAAGGAACATCTGTTGAACCACGTGCGGCAACACACGGGCGAGTCGCCGCACCGCTGCAGCTTCTGCGCCAAGTCCTTCACACGCCGCGAACACCTCGTCAACCACGTGCGACAGCACACTGGCGAGACGCCATTCCAGTGCGGGTACTGCCCAAAGGCGTTCACCAGGAAAGATCACTTAGTGAACCACGTGCGTCAGCACACCGGGGAGTCCCCGCACAAGTGCTCGTACTGCACGAAGACGTTCACCCGCAAGGAGCATCTCACCAACCACGTGCGGCAACACACGGGCGAGTCGCCGCACCGCTGCACCTACTGCGCCAAGTCCTTCACGCGCAAGGAGCACCTCGCCAACCACACCAGACAGCATACGGGCGAAACTCCTCACAAGTGCACGTACTGCACGCGGTCGTTCGCGCGCAAGGAGCACCTCACGAACCACGTGCGCCAGCACACCGGCGACATGCCGCATCCCTGCTCCTACTGCAACAAGCGGTTCACGCGCAAGGAGCACCTCGTCAACCACGTGCGACTGCATACGGGCGAGACTCCGTTCAAGTGCACGTATTGCACGAAGGAGTTCTCCCGCAAGGAGCACCTCACCAACCACGTGCACCAGCACACCGGGGAGACGCCGCACAAGTGCCCCTTCTGCACCAAGACCTACTCCCGCAAGGAGCATTTGACCAACCACGTCAGAATCCACACGGGCGAGTCGCCGCACCGCTGCGAGTACTGCGACAAGACGTTCACGCGCAAGGAGCACCTCATCAACCACCTGAAGCAGCACACGGGCGACACGCCGCACGCCTGCAAGGTCTGCTCCAAGCCCTTCACCAGGAAGGAACACCTCATGACGCATATGAGAGCACACAACTGCGGCGAGAGACCGTACTCGTGTGGGGAGTGCGGCAAGTCCTTCCCGTTGAAAGGCAATCTGCTCTTCCACGAGCGGTCGCATCAGAAGGGAGGCGGAAACAGACCCTTCAGATGCGATATTTGCTCCAAGGactttatttgcaaagGTCACTTGGTGTCGCACCAGCGCACGCACCAGACGGCGGGTGAGACTGCGCCCGGTGAGCAGCAGCCCGCCGCGCCCGTCGCCCCCGACGCAGCCAAGGACGCCGCGGACCGTGCTGACCGCAAACACGACGTCAGAGCAACAACTAACGAAAACAGACCGACAGAAGAAGAGGTCGCCCAGAGTCAGCAAAATAATGCTGTTATGCAAATTACTAGCCAGGTCCGAGGCGGTACGAGCAGCGCGACTAGTGTGGCGACGTTTACGCACACGACTAGCGCGCAGCACCACGCCGGCGGTGTCGCGCACCATCCCGTCACCGTCAACTACTAG
Protein Sequence: MNTEHHSINTGGGQPPGNSESQNQRVSSSQQQQSNNNLPPTTSATDLRVNSAAVNVALSSVAKYWVFTNLFPGPIPQVSVYGLPPNARLENGKPVQELGQAHTGLLNGDPNLILGQHGGQPLSVSGPSGQQIPVTQIIATQLQSGQSHESLGAHGQQQDHSQQNPGNTSQGSVSTSQPSHQQVPNNRVDFIQHHNTDMVNYVGHHSQQHSMQQQQLMSANRDHTNQQIQLTVSEDGIVTVVEPGGGKVVDKEEMHDAIKMPTDHTLTVHQLQQIVGHHQVIDSVVRIEQATGEPANILVTQNPDGTTSIETSASEQLIVKDEKNVAKIESTQFAIPTDIKDIKGLDLKNVGTMGMEGAVVKISAGASEHDLHAMYKVNVEDLSHLLAYHEVFGKLNPEGQPQPKPINEVDEAGTSAAIAESDTSPGHHSCDICGKIFQFRYQLIVHRRYHGESKPYTCQVCGTAFANAMELSRHGKCHLAGDPSERQTKRLTQDKPYACTTCHKAFSRKEHLDNHVRSHTGETPYRCQFCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHFMNHVMWHTGETPHHCHICLKKYTRKEHLVNHMRSHTNDTPFRCELCGKSFTRKEHYTNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCSFCAKSFTRREHLVNHVRQHTGETPFQCGYCPKAFTRKDHLVNHVRQHTGESPHKCSYCTKTFTRKEHLTNHVRQHTGESPHRCTYCAKSFTRKEHLANHTRQHTGETPHKCTYCTRSFARKEHLTNHVRQHTGDMPHPCSYCNKRFTRKEHLVNHVRLHTGETPFKCTYCTKEFSRKEHLTNHVHQHTGETPHKCPFCTKTYSRKEHLTNHVRIHTGESPHRCEYCDKTFTRKEHLINHLKQHTGDTPHACKVCSKPFTRKEHLMTHMRAHNCGERPYSCGECGKSFPLKGNLLFHERSHQKGGGNRPFRCDICSKDFICKGHLVSHQRTHQTAGETAPGEQQPAAPVAPDAAKDAADRADRKHDVRATTNENRPTEEEVAQSQQNNAVMQITSQVRGGTSSATSVATFTHTTSAQHHAGGVAHHPVTVNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01157022;
90% Identity: iTF_01145410; iTF_01147529; iTF_01149756; iTF_01139094; iTF_01144701; iTF_01143267;
80% Identity: -