Pdem008330.1
Basic Information
- Insect
- Papilio demoleus
- Gene Symbol
- retn
- Assembly
- GCA_029286655.1
- Location
- JAGSMY010000011.1:5762020-5770155[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.7e-20 7.9e-17 62.0 0.0 16 89 71 142 62 142 0.95
Sequence Information
- Coding Sequence
- ATGATCTTTAGGCTAGCAGCGAGGAGAGGTATTGGCTTAGATGTAGAGTTTGAATTGGTGTGCGCGGGGTCGCTAGGTACACTCTATAGGCGAGTAATTGAGATCGATCAAGTCGTGAATCGAGTTGGGCGGCGCAATCAAAAGCGTATCAAGCCAATGAGCGACCGGCGGCGTGACTCGCAAGCTCGCTATTGGCCGGCCGCAGGGCCGAGGGGTACACCTATAAACCGGCTGCCGATAATGGCGAAGTCCGTGCTGGATCTGTATGAGCTGTACAACCTGGTGATAGCCCGCGGAGGTCTCGTCGAGGTTATCAACAAGAAGTTGTGGCAGGAGATCATCAAGGGCTTGAGACTGCCTTCCTCGATCACTTCAGCTGCGTTCACACTGCGCACACAATATATGAAGTACTTATACGACTATGAGTGTGAGAAGAAGAACCTATCAACACGCAGTGAACTGGACGCAGCTATCGAGGGTAACAAGCGCGAAGGTCGACGCGCATCGGGACAGTATGACGCGCAGGCTGCACTAGCTATGcCGTCGCTCAACCGCGGCGTGTCGCTGTCGATGCCGCTAGCACAGCCGCTGGCGTTGCCGCTGGGCGCGGTGCCGCGGCTGCCTCTGCACGCGCCTCACCTACACTCGCACGACATCGAGTACCGCGTGCGAGAGTACATGAAGATGATACAACAGCAGAGAGACCTCATCAGAAATGGTTCGGAGTCACCGCCCGGTAACGGTGGTACAATGATGTCGCCGCGAGAGGCCGCGCTGAGCGCCATCGACGTGTCCCGCCTCACTCTCTGGTCGCtctacaacaacaacaacaacagcCCGCAGCCAGACCTCGAGCCGCAGCGTGAGGCGTTGAATCTCAGCGAGAGTCCGAACTCAACAGCGAGCGGGGGCAAGCGGGAAGCTTGCCGCtccccgccgccgcccgccaagcgccgcacgccgcgccctCCCTCGCCCCGCGACACCCCGCCGCGACACGCGCACGCGCATGCGCACGCCGCGCACGCAGCACACGGCAGCCACGGCGCGCAAGCGCACACGCCTCAGCTCAACGGCAACGCCAACGGACTCAACAACGGCGTCAATGGAGCCGCCTTCAAGATCACAACCAGAGGTGATGCAAACACAGGAGACCAGCAGCTAGTAGTATCAATAGAGCTGAACGGAGTAACGTACGAAGGAGTATTGTTCCCCTCGCAGAGCGGCGGCCAGGCGCATAGACAAATGGTctcttaa
- Protein Sequence
- MIFRLAARRGIGLDVEFELVCAGSLGTLYRRVIEIDQVVNRVGRRNQKRIKPMSDRRRDSQARYWPAAGPRGTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALAMPSLNRGVSLSMPLAQPLALPLGAVPRLPLHAPHLHSHDIEYRVREYMKMIQQQRDLIRNGSESPPGNGGTMMSPREAALSAIDVSRLTLWSLYNNNNNSPQPDLEPQREALNLSESPNSTASGGKREACRSPPPPAKRRTPRPPSPRDTPPRHAHAHAHAAHAAHGSHGAQAHTPQLNGNANGLNNGVNGAAFKITTRGDANTGDQQLVVSIELNGVTYEGVLFPSQSGGQAHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01154802;
- 90% Identity
- iTF_01141437; iTF_01145086; iTF_01148619;
- 80% Identity
- -