Pmem017500.1
Basic Information
- Insect
- Papilio memnon
- Gene Symbol
- retn
- Assembly
- GCA_003118335.3
- Location
- JAOPJP010000008.1:2414484-2419914[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.2e-19 4.2e-16 59.5 0.0 17 89 55 125 47 125 0.93
Sequence Information
- Coding Sequence
- ATGCGATGCGATACGATTTGGCACGCTCTCCCGGCTTTACGGGTTTTACGGATCTTACGTGCTTTACGAGTTTTACGGCCCTTACCCGCCGCGGCTGTAAAAGGTTTTACAGCAGGAGCGGGCAACGATCTGACTTACGGCGCGACGCTCGCCTGCCGAGCTCGCACTCCTATAAACCGGCTGCCGATAATGGCGAAGTCCGTGCTGGACCTGTACGAGCTGTACAACCTGGTGATCGCCCGCGGCGGCCTCGTCGAAGTCATCAACAAGAAGCTGTGGCAGGAGATCATCAAGGGCCTGAGACTGCCATCCTCCATCACTTCTGCAGCATTCACACTACGTACACAATACATGAAGTATTTATACGACTACGAGTGTGAGAAGAAGAATCTATCGACGCGCAGTGAGCTAGACGCGGCCATTGAGGGGAACAAGCGCGAAGGCCGGCGCGCCTCGGGACAGTATGACGCGCAGGCAGCGCTCGCTATGCCATCGCTGAACCGTGGTGTGTCTCTATCGATGCCGCTGGCGCAGCCGTTAGCGCTGCCTCTGGGCGCGGTGCCGCGGCTACCATTGCACGCGCCGCATCTACACTCGCACGACATCGAGTACCGTGTGCGAGAGTACATGAAGATGATACAACAGCAGAGGGACCTTATAAGAAACGGTTCGGAGTCACCTCCCGGCAACGGCGGTACGATGATGTCGCCGCGAGAGGCCGCGCTGAGCGCCATCGACGTGTCGCGTCTCACGCTCTGGTCGCTCTACAACAACAACAACAACAGCCCGCAGCCGGACCTCGAGCCGCAGCGTGAGGCGTTGAATCTAAGCGAGAGTCCGAACTCAACCGCGAGCGGCGGCAAGCGGGAGGCGTGCCGCTCCCCCCCGCCGCCCGCCAAGCGCCGCACGCCGCGCCCCCCCTCGCCCCGCGACACGCCGCCGCGGCATGCGCACGCCGCACACGCGCCGCACGCGCCACACGCCGCGCACCCCGCGCACGGCAGCCACGGCCCGCACGCGCACACGCCGCAGCTCAACGGCAACGCTAATGGACTCAACAACGGCGTCAACGGTGCCGCCTTCAAGATCACAACCAGAGGTGATGCAAACACAGGAGACCAGCAACTGGTAGTGTCAATAGAGCTGAACGGTGTCACGTACGAAGGAGTCCTCTTCCCCTCGCAGAGCAACGGCCAAGCAGCTCACAGGCAAATGGTCTCTTAA
- Protein Sequence
- MRCDTIWHALPALRVLRILRALRVLRPLPAAAVKGFTAGAGNDLTYGATLACRARTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALAMPSLNRGVSLSMPLAQPLALPLGAVPRLPLHAPHLHSHDIEYRVREYMKMIQQQRDLIRNGSESPPGNGGTMMSPREAALSAIDVSRLTLWSLYNNNNNSPQPDLEPQREALNLSESPNSTASGGKREACRSPPPPAKRRTPRPPSPRDTPPRHAHAAHAPHAPHAAHPAHGSHGPHAHTPQLNGNANGLNNGVNGAAFKITTRGDANTGDQQLVVSIELNGVTYEGVLFPSQSNGQAAHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01154802;
- 90% Identity
- iTF_01140725;
- 80% Identity
- -