Ppro004853.1
Basic Information
- Insect
- Papilio protenor
- Gene Symbol
- retn
- Assembly
- GCA_029286645.1
- Location
- JAGSMZ010000007.1:5454934-5465637[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.9e-19 3.2e-16 60.0 0.0 17 89 60 130 52 130 0.94
Sequence Information
- Coding Sequence
- ATGCGATGCGATACGATTTGGCACGCTCTCCCGGCTTTACGGGTTTTACGGATCTTACGTGCTTTACGAGTTTTACGGCCCTTACCCGCTCCGGCTGTAAAGGGTTTTACAGCGGGATCGGGCAACGATCTGACTTACGGCGCGACGCTCGCCTGCCGAGCTCGTTTCCTTGTCGTTGGCACTCCTATAAACCGGCTGCCGATAATGGCGAAGTCCGTGCTGGACCTGTACGAGCTGTACAACCTGGTGATCGCCCGCGGCGGCCTCGTCGAGGTCATCAACAAGAAGCTGTGGCAGGAGATCATCAAGGGCCTGAGACTGCCATCCTCCATCACTTCTGCAGCATTTACACTACGTACACAataCATGAAGTATTTATACGACTACGAGTGTGAGAAGAAGAATCTATCGACGCGTAGTGAGCTAGACGCGGCTATCGAGGGTAACAAGCGCGAAGGCCGGCGTGCTTCGGGGCAGTACGACGCACAAGCAGCGCTCGCTATGgataaggaggaagatgatgatagAAGAATAATTAAGACGAGTATTAAAGTGCATGTATCGTTACAGCCATCGTTGAACCGTGGGGTGTCGCTGTCGATGCCGCTGGCGCAGCCGCTGGCGCTGCCGCTGGGCGCGGTGCCGCGGCTGCCGATGCACGCGCCGCATCTACACTCACACGACATCGAGTACCGCGTGCGAGAGTACATGAAGATGATACAACAACAGAGGGACCTTATCAGAAACGGTTCGGAGTCACCTCCCGGCAACGGCGGTACGATGATGTCGCCGCGAGAGGCCGCGCTGAGCGCCATCGACGTGTCGCGTCTCACGCTCTGGTCGCTctacaacaacaacaacaacagccCGCAGCCGGACCTCGAGCCGCAGCGTGAGGCGTTGAATCTAAGCGAGAGTCCGAACTCAACCGCGAGCGGCGGCAAGCGGGAGGCGTGCCGCTCCCCCCCGCCGCCCGCCAagcgccgcacgccgcgcccCCCCTCGCCCCGCGACACGCCGCCGCGCCACGCacacgccgcgcacgcgccgcacgcgccgcacgccgcgcaccccgcgcacggCAGCCACGGCCCGCACGCGCACACGCCGCAGCTCAACGGCAACGCTAATGGACTCAACAACGGCGTAAACGGTGCCGCCTTCAAGATCACAACCAGAGGTGATGCAAACACAGGAGATCAGCAACTTGTAGTGTCAATAGAGCTGAATGGAGTCACGTACGAAGGAGTCCTCTTCCCCTCGCAGAGTAATGGCCAAGCAGCTCACAGGCAAATGGTCTcttaa
- Protein Sequence
- MRCDTIWHALPALRVLRILRALRVLRPLPAPAVKGFTAGSGNDLTYGATLACRARFLVVGTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALAMDKEEDDDRRIIKTSIKVHVSLQPSLNRGVSLSMPLAQPLALPLGAVPRLPMHAPHLHSHDIEYRVREYMKMIQQQRDLIRNGSESPPGNGGTMMSPREAALSAIDVSRLTLWSLYNNNNNSPQPDLEPQREALNLSESPNSTASGGKREACRSPPPPAKRRTPRPPSPRDTPPRHAHAAHAPHAPHAAHPAHGSHGPHAHTPQLNGNANGLNNGVNGAAFKITTRGDANTGDQQLVVSIELNGVTYEGVLFPSQSNGQAAHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01154802;
- 90% Identity
- iTF_01140725;
- 80% Identity
- -