Pelw012209.1
Basic Information
- Insect
- Papilio elwesi
- Gene Symbol
- retn
- Assembly
- GCA_029641285.1
- Location
- CM056351.1:3680585-3686668[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3e-19 6.2e-16 59.0 0.0 17 89 58 128 46 128 0.93 2 2 6.3 1.3e+04 -2.9 0.0 25 38 247 260 211 261 0.67
Sequence Information
- Coding Sequence
- ATGCGATGCGATATGATTTGGCACGCTCTCCCGGCTTTACGGGCTTTACGGATTTTACGGGGTTTACGGCCCTTACCCGGCGCGGCTGTAAAGGGTTTTACAGCGGCCGAAGCGTGCAACGATCTGACTTACAGCGCGACGCTCGCCCGACGCAATCGTTTCCTCGTCGTTCGCACTCCCATAAACCGGCTGCCGATAATGGCGAAGTCGGTTCTCGATCTGTACGAGCTGTACAACCTGGTGATAGCCCGCGGCGGCCTCGTGGAGGTCATCAACAAGAAGCTGTGGCAGGAGATCATCAAGGGACTGCGACTGCCCTCCTCTATCACCTCCGCCGCGTTCACACTTCGCACACAgtacatgaaatacttatacgACTACGAGTGCGAGAAGAAGAACCTGTCGACGCGGAGCGAGCTGGACGCCGCCATCGAGGGCAACAAGCGCGAGGGCCGGCGCGCCTCGGGGCAGTATGACGCGCAGGCGGCGCTCGCCATGCCGTCGCTGAACCGAGGCGTGTCGTTGTCGATGCCGctggcgcagccgctggcgctGCCGCTGGGCGCGGTGCCGCGGCTGCCGCTGCACGCGCCGCACCTGCACAGCCACGACATTGAGTACCGCGTGCGCGAGTACATGAAGATGATACAGCAACAACGGGACCTCATCAGAAACGGGTCGGAGTCACCACCCAGCAACGGGAGTACGATGATGTCGCCCCGCGAGGCCGCACTGAGCGCGATAGACGTGTCGCGCCTCACGCTCTGGTCGCtctacaacaacaacaacagtcCCCAGCCAGACCTCGAGCCGCAGCGTGAGGCGTTGAATTTAAGCGAAAGTCCAAACTCGACTGCGACCGGTGTCAACATCAAGAGGGAAGCGTGCCGCTCTCCCCCGCCGCCCGCCAAACGCCGCACCCCGCGCCCGCCCTCGCCCCGCGACACCCCGCCGCGACACGCGCACGCCACGCATGGACCACACGGAGGTCACGCTACGCACCTTAGCCACGCACACACGCCGCAGCTCAATGGCAATGCCAACGGAGTCAACAATGGCGTCAATGGGGCCGCGTTCAAGATCACAACCAGAGGTGATGCAACCACCGGGGATCAACAATTGGTCGTCTCGATCGAACTCAACGGAGTCACGTACGAAGGCGTTCTCTTCCCCTCACAAAACGGAAACGGCCAAAGCGCTCACAGGCAAATGGTTTCTTAA
- Protein Sequence
- MRCDMIWHALPALRALRILRGLRPLPGAAVKGFTAAEACNDLTYSATLARRNRFLVVRTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALAMPSLNRGVSLSMPLAQPLALPLGAVPRLPLHAPHLHSHDIEYRVREYMKMIQQQRDLIRNGSESPPSNGSTMMSPREAALSAIDVSRLTLWSLYNNNNSPQPDLEPQREALNLSESPNSTATGVNIKREACRSPPPPAKRRTPRPPSPRDTPPRHAHATHGPHGGHATHLSHAHTPQLNGNANGVNNGVNGAAFKITTRGDATTGDQQLVVSIELNGVTYEGVLFPSQNGNGQSAHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01154802;
- 90% Identity
- iTF_01140725;
- 80% Identity
- -