Phep024741.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Pandemis heparana
Gene Symbol
-
Assembly
GCA_963854515.1
Location
OY978032.1:3290633-3302389[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 25 0.0019 0.12 13.6 5.2 1 23 253 276 253 276 0.93
2 25 1.9 1.3e+02 4.1 0.2 3 23 303 324 303 324 0.96
3 25 0.015 1 10.7 0.6 1 23 349 371 349 371 0.98
4 25 0.91 60 5.1 1.1 1 23 375 397 375 397 0.78
5 25 1 68 4.9 3.9 1 23 401 424 401 424 0.93
6 25 6.3 4.1e+02 2.5 8.7 2 23 431 453 430 453 0.94
7 25 0.0016 0.11 13.7 0.4 1 23 460 483 460 483 0.95
8 25 0.0014 0.09 14.0 4.9 1 23 489 511 489 511 0.98
9 25 5.8e-06 0.00039 21.4 2.7 1 23 517 539 517 539 0.98
10 25 0.074 4.9 8.5 0.9 1 23 604 626 604 626 0.96
11 25 0.23 15 7.0 0.0 2 23 655 677 654 677 0.92
12 25 3.3 2.2e+02 3.3 0.6 2 23 698 720 697 720 0.91
13 25 0.0012 0.078 14.2 2.1 2 23 726 748 725 748 0.95
14 25 0.011 0.7 11.2 1.3 1 23 753 776 753 776 0.96
15 25 0.66 44 5.5 0.1 2 23 779 801 778 801 0.95
16 25 0.037 2.4 9.5 1.4 2 21 808 827 807 828 0.93
17 25 0.012 0.78 11.0 0.4 1 23 889 912 889 912 0.92
18 25 0.13 8.7 7.7 0.1 3 23 941 962 939 962 0.93
19 25 0.089 5.9 8.3 1.0 3 23 986 1008 984 1008 0.95
20 25 0.0011 0.072 14.3 0.6 3 20 1015 1032 1013 1036 0.90
21 25 0.027 1.8 9.9 0.4 1 23 1041 1064 1041 1064 0.97
22 25 0.00029 0.019 16.1 0.4 2 23 1070 1092 1070 1092 0.94
23 25 8.1e-05 0.0053 17.8 4.7 1 23 1096 1119 1096 1119 0.97
24 25 0.00035 0.023 15.9 0.6 2 23 1126 1147 1125 1147 0.96
25 25 0.0076 0.5 11.6 3.2 1 23 1153 1175 1153 1175 0.97

Sequence Information

Coding Sequence
ATGGATTTTGACGAGATTGTTGTTAAAGAGAGCCCCGGCTTGTGCCGGTGCTGCCTTTCCGAGGGCTGTTATAAAGACTTGGGTTCAGAGTATAGTTGGATGAGCGAAACCGAAATTTATGCCGATATGTTACTAGAATGCTTCGATATCAGCATATCGCAGCATCCAACCGGGCCGAACGGTTCAAACCGTCTCATATGCGAAGTGTGCATCACGCGGCTGCGGGACGCATGCAACTTCAAGAAGCAGGTGCTGGAGTCGGAGAAGCGATTCGTGGGCATGGTGGGCCGCGGGGAGTTCCGGCCCAAAGTGCTGCTGTACCAGACGCAGATGAAGACCGAGCTCAGCATGGAGATAGAGGAGGATACCGGGGCTGATGATGCTGAAGTGGAATATCTCGAAGATGATGCAGACTTTGTAGATGAGGACCTTCTCAAAAACGAAGACTACGGAGAACCCTCAGTGTCTGAAGACATAACAGTCTCCGCTTTAGCCGTGAAAGGCAAGCGGGGGCGCCCGAAGAAGTCCTCTACAGCCGTGAAGCCGGAGAAGAAGGCTAAGGTGCCCAAGCTCGAGGAGAAGCCCACCAAGTCCAAAGCCGTTGCTAAAGGTAAGAAACGGCCGGAACCCGCGTCCGACGCAACGACAAATAGGTCCCAATTGTCAGCAACCAAACGAAACAGGCTCATGAAGGCAAACGCCATCATTGTCCTAGAATCATCCACGGTTGTGCCTTTCAAATGGCAGAGGCAGAATTACCTATGTTTCTTTTGCCACAAGACGTTTAAGAGCACTGAATCCCTCAAAAAACATACCAGGGATGATCACCAGAAATCCAACATCAAAGCCGCCGTTTCTTACCTAAGGAGGGACGAGAAAGTTAAAGTTGACGTGACTGTTATAGGCTGCAGAATCTGTAGCGCAAAGTTAGACGACATAAACTCGCTTATAACGCATCTCCGATCAGCGCACGACAAAAAATTCACCGAACAATATGGCTGCTTCGGCGTCATACCATACAGACTCGATTGCGACGATAATACTTTCCAATGCGCAGTTTGCAACGAACAATTCCAATACTTTATCAAACTAAACGAACACATGAATCTACACTACGGGAATTACATATGCGATGTTTGTGGCAAAGGTTTCCTCAGCCAGAACAGGTTGAGGTGTCACGTGTTGAATCACGGCTCGGGTTTCCGTTGCAGCCTTTGCCCTGAAACCTTTGACTCTCTCACCATGAGACACAATCACGAATGCAAAGTGCACAACAAGGAGAAACTTTGCAAGTGTTTTTACTGTGACGAAACTTTCCCAAATTACATGCGGCGCAAACGCCATCACCACACCGTGCATAATCTAGAAATACCAGGCTTCAACTGTCCGATATGTCACAAGGCGTTCGAAATAGAAAGCAAAATGCAAGTGCATCTCAAAGAAGTGCATGTGAGAGAGAAGAATTACTCGTGCACCATGTGCGATCAGAAGTTTTTCTCGAAGACACACGTCCAGAAGCATATGGTGAAGCATTTTGGTGAGAGAGTGCATCAGTGCGAAGTGTGTAAGAAGTCTTACGCGAGGAAACAGACTTTGAGGGATCATATGCGTATCCATAGCAACGATAAGAGATTTGTATGCGCGCTGTGCAGCCAGGCTTTTGTGCAGAATAACATAGAGAAAATTTCCTTTTCAGATGTTAAACCGCGGAAATACAAAGGCTGTGAATCGTCGTCGATGCGCAGACGGAAAAATCTCCAAATACTGTTCAACACCACAACGATAATACCTTTCAAATGGCGCGGCAAATACCTCTGCTTCTATTGCAGCAAAGATATAGCGGAGTACTCCGCACTCCGCAAACATACCAAGTCCCATGGGGACTGCTCTACGCGCGATCACTCCTTAAAAGTCCTCAAGGGAGGCCAAAACATGGAAATTAAAATAGACGTATCCGATATTAGTTGCGAAATCTGTAGCGAACCATTTCCTACTATAGACGATATAATAACGCATTTGTTCATCAAACACAAGTTAGAGTACGATAGGGGAGTAGACATGGCTATAGAAGAGTATAGGCTGGTAGATCTCAGTTGTCTGGCGTGTGAGGAAAAATTCGCGTATTTCGGCTACTTGGTGTCACATGTCAACAATTGTCATCCTAAGAACTGCCTCATTTGCGACAAGTGCGAGCAAAAGTTTAATAAGAAACGTGACTTGTTCTCTCACATGAAGAACTACCATAGAGAAGGTGGTTATCAGTGTGAATCGTGCCCGCAGACGTTTAGTTCTTTAAATATTCTCCGTAAACACAGAAACAATAGACATTTGACTAGGTGTAGCGTTTGCCAGTTAAAACTGCCGTCGGCCGCATTGAAACAAAAGCATATGGAAATTGAACATCCCGATGATGGCTCTTTGCAGTGCGATAATTGCTTCAAAGAATTCCACACGAAACAGGGACTCCGAATGCATGCGAGGAAGTGTAAAGGCGATGATGATTTGTTTCAAAttgaaataagaaaaagggaTTACGATCCTATGGACCTGGATCAGAACTACGAAGACCCCGTGAAAAGACCTAGCGTTAAACAGATTAGGGAAAATATAGTCGTAGTTATAAACATGTCGACGGCAATACCTTTTAATTTCTACAAGAATAAGTTTAACTGTTTTTATTGCTCCAAAGACTTCCCCGACTCTGATTTGATGCGTGAGCATACTGTTATCGAACATCCTGTGTGTGACGTCAAACAGAAATGTATAAGGAAATGTAGGGAGTCTGTAGCGTGCGTCAAAGTTGACATTTCGTCTCTAGCTTGTAAATTGTGCTTCGAGTCTGTATCAGACTTCGATAATTTGTTagatcatttaattttaaaacacgaCGCTAATTACGATAAGTCTATAACAACTTGCTTGCAACCTTATAGGCTTATAAAAGACCATATGGCTTGCCCGCACTGTCCCAACGAAGTCTTTAGGTTCTTCGGTACGTTATTAAAACATATGAACAACAAACatactaacaataatataatttgcgTCTATTGCGGACAAACATTTAGGCGGGATCAGAATCTGCGCGTTCATATCTGGAGGCATCACAGGGACGGTAGATTTAAATGTAACATTTGTGGTGTGGATTGTAATATACCGTCTAGACTGTACATGCATATGGCTAAAGCCCACGGCGTCAAGGCGGCCAAATGTCCTAAATGTCCAGAGAGCTTCTCAACTCAGTATTTAAGACAGAAACATCTCATCGAAGTACACAATTCGGGCCACAAGTGCTCCTATTGTGGGAAACTGTTCACTCGTAATTCTTTCATGAGAGACCACATTCGACGGACTCATTTGAAGGAGAAAAATGTCGAATGCTCCATCTGTAACATGAAGTTTTTCAACAACATACTCCTTAGACGCCACATGGTTAAACATAGCGGCGAGAAGAACTTCCATTGCGATATTTGCGGTGAAAGATTCTTTTGGAGAAAAAGTCTTCGGACTCACATGTCTAGGCACAATAAGCACATTCATCCATCACATATTTAA
Protein Sequence
MDFDEIVVKESPGLCRCCLSEGCYKDLGSEYSWMSETEIYADMLLECFDISISQHPTGPNGSNRLICEVCITRLRDACNFKKQVLESEKRFVGMVGRGEFRPKVLLYQTQMKTELSMEIEEDTGADDAEVEYLEDDADFVDEDLLKNEDYGEPSVSEDITVSALAVKGKRGRPKKSSTAVKPEKKAKVPKLEEKPTKSKAVAKGKKRPEPASDATTNRSQLSATKRNRLMKANAIIVLESSTVVPFKWQRQNYLCFFCHKTFKSTESLKKHTRDDHQKSNIKAAVSYLRRDEKVKVDVTVIGCRICSAKLDDINSLITHLRSAHDKKFTEQYGCFGVIPYRLDCDDNTFQCAVCNEQFQYFIKLNEHMNLHYGNYICDVCGKGFLSQNRLRCHVLNHGSGFRCSLCPETFDSLTMRHNHECKVHNKEKLCKCFYCDETFPNYMRRKRHHHTVHNLEIPGFNCPICHKAFEIESKMQVHLKEVHVREKNYSCTMCDQKFFSKTHVQKHMVKHFGERVHQCEVCKKSYARKQTLRDHMRIHSNDKRFVCALCSQAFVQNNIEKISFSDVKPRKYKGCESSSMRRRKNLQILFNTTTIIPFKWRGKYLCFYCSKDIAEYSALRKHTKSHGDCSTRDHSLKVLKGGQNMEIKIDVSDISCEICSEPFPTIDDIITHLFIKHKLEYDRGVDMAIEEYRLVDLSCLACEEKFAYFGYLVSHVNNCHPKNCLICDKCEQKFNKKRDLFSHMKNYHREGGYQCESCPQTFSSLNILRKHRNNRHLTRCSVCQLKLPSAALKQKHMEIEHPDDGSLQCDNCFKEFHTKQGLRMHARKCKGDDDLFQIEIRKRDYDPMDLDQNYEDPVKRPSVKQIRENIVVVINMSTAIPFNFYKNKFNCFYCSKDFPDSDLMREHTVIEHPVCDVKQKCIRKCRESVACVKVDISSLACKLCFESVSDFDNLLDHLILKHDANYDKSITTCLQPYRLIKDHMACPHCPNEVFRFFGTLLKHMNNKHTNNNIICVYCGQTFRRDQNLRVHIWRHHRDGRFKCNICGVDCNIPSRLYMHMAKAHGVKAAKCPKCPESFSTQYLRQKHLIEVHNSGHKCSYCGKLFTRNSFMRDHIRRTHLKEKNVECSICNMKFFNNILLRRHMVKHSGEKNFHCDICGERFFWRKSLRTHMSRHNKHIHPSHI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00155558; iTF_01246118; iTF_01135025; iTF_00156510; iTF_00680839;
90% Identity
iTF_01135025;
80% Identity
-