Epro035509.2
Basic Information
- Insect
- Eudemis profundana
- Gene Symbol
- -
- Assembly
- GCA_947034915.1
- Location
- CAMQQJ010000457.1:226557-241184[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 25 0.0029 0.24 13.2 4.3 1 23 246 269 246 269 0.93 2 25 0.56 45 6.0 0.1 2 23 295 317 294 317 0.92 3 25 0.017 1.4 10.8 0.4 1 23 342 364 342 364 0.98 4 25 1.2 1e+02 4.9 1.2 1 23 368 390 368 390 0.84 5 25 0.24 20 7.2 1.8 1 23 394 417 394 417 0.90 6 25 1.2 96 5.0 7.1 2 23 424 446 423 446 0.90 7 25 0.0011 0.091 14.5 0.4 1 23 453 476 453 476 0.95 8 25 0.0024 0.19 13.5 4.8 1 23 482 504 482 504 0.97 9 25 3.8e-06 0.00031 22.3 2.8 1 23 510 532 510 532 0.98 10 25 0.58 47 6.0 0.5 1 23 571 593 571 593 0.95 11 25 0.29 24 6.9 0.1 2 23 622 644 621 644 0.93 12 25 0.79 64 5.5 0.1 2 23 665 687 664 687 0.92 13 25 0.0026 0.21 13.4 1.7 2 23 693 715 692 715 0.95 14 25 0.006 0.48 12.2 0.8 1 23 720 743 720 743 0.96 15 25 0.4 32 6.5 0.1 2 23 746 768 745 768 0.95 16 25 0.026 2.1 10.2 1.6 2 22 775 795 774 795 0.94 17 25 0.0064 0.51 12.1 0.3 1 23 855 878 855 878 0.95 18 25 1.2 1e+02 4.9 0.1 3 23 907 928 905 928 0.92 19 25 0.078 6.3 8.7 0.6 3 23 952 974 950 974 0.95 20 25 0.0013 0.1 14.3 0.6 3 20 981 998 979 1002 0.90 21 25 0.02 1.6 10.6 0.4 1 23 1007 1030 1007 1030 0.97 22 25 0.00086 0.07 14.9 0.2 2 23 1036 1058 1036 1058 0.94 23 25 8.9e-05 0.0072 18.0 4.9 1 23 1062 1085 1062 1085 0.97 24 25 0.0004 0.032 15.9 0.6 2 23 1092 1113 1091 1113 0.96 25 25 0.0064 0.51 12.1 2.3 1 23 1119 1141 1119 1141 0.97
Sequence Information
- Coding Sequence
- ATGGATTTTGACGAAATTGTGGTGAAAGAGAGCCCCGGCTTATGCCGGTGCTGTCTGTCCGAAGGATGCTACAAAGACCTAGGTTCTGAATATAGTTGGATGAGCGAGACCGAAATTTACGCCGATATGCTGCTTGAATGCTTCGATATTAGCATATCACAGCATCCGACCGGTCCGAATGGCTCCAACAGACTCATCTGTGAAGTGTGCATCACTCGGTTACGGGACGCTTGCAACTTCAAGAAGCAGGTGCTTGAGTCGGAGAAAAAGTTCGTGGATATGGTGGGGCGCGGGGAGTTCCGGCCAAAAGTCCTGCTGTACCAGACCCAGATGAAGACTGAACTGAACATGGATCTGGAGGAAGATACCGGGGCTGATGATGGCGAGGTGGAATATCTAGAGGAGGACGTAGACTTCGTTGATGAGGAACTCCTCAAATCCGAAGACTACGCAGAGGCCTCAGTGTCCGAAGACATCACCGTCTCAGCCCTGGCTGTTAAAGGCAAACGGGGTCGACCGAAGAAGACCGCAGCCAAGCCGGAGAAGAAGGCTAAAGTCGCCAAGTTGGAAGAAAAGCCCAAGAAAGCAGTTGCTAAAGGTAAAAAACGCCCAGACTCGGCCGTCCTACAAACTAAGCCATTGACGGCGACCAAACGCAACCGCCTAATGAAAGGCAACGCTACGATAGTCCTAGAGAACTCAACAGTAGTCCCCTTCAAATGGCAGAGACAGAACTACCTCTGCTTCTTCTGTCATAAGACTTTCAAGAGCACTGACTCTCTAAAAGACCACACGAGGGACGAGCATAAGAAATCCAACATAAAAGCGGCAGTTTCTTACCTAAGAAGGGACGAGAAAGTCAAAATTGACGTCACTGTCATTGAGTGTAAACTTTGTGGCGTTAAATTAGACGATCTTAACTCTCTCCTAACTCATCTTACTGAAAAACACGATAAGACCTTCACGGAACAAAGCGGATCCTTTGGTTTAATCCCTTACAAACTAGATACTGGCTCTAGCTCCTTCCAATGCGCCGTTTGCACGGAAGAATTCCAATATTTCATTAAACTTAATGAACACATGAACATACACTTCGGTAGCTATATCTGTGAGCTCTGCGGCAAAGGATTCTTAAGTCAAAACCGTTTAAGATGCCACGTGTTAAGCCACGGCGCTGGTTTCCGATGCACCATGTGCCCTGAGACGTTTGACTCGTTAACCATGAGACATAACCACGAAACTAGAGTCCATAACAAGGAGAAACTCTGCAAGTGCTTCTATTGCGACGAAACATTCCCTAACTACATGCAAAGGAAGAGACATCATCACGCTGTCCATAACTTAGAAATCCAAGCGTTCAACTGCCCTATCTGTCATAAAGCGTTTGAAATTGAGAGCAAAATGCAGGTTCACATCAAGGAAGTGCATGTAAGAGAGAAGAATTTCTCTTGCTCTATGTGCGACCAGAAGTTTTTCTCTAAAACCCACGTGCAGAAACACATGGTAAAGCATTTTGGGGAGAGGGTGCACCAGTGTGAGATTTGCAAGAAGTCGTACGCAAGGAAGCAGACGTTAAGGGATCATATGCGTATACATAATGTAAAACCGCGGAAATACAAAGGCTGCGAATCGTCTTCGATGCGCAGACGAAAGAACCTACAAATATTGTTCAACAACACTACAATCATTCCCTTCAAATGGAGGGGGAAATACCTCTGCTTCTATTGTAGTAAAGATATAGCCGAATACCCCGCTCTTCGAAAACATACGAAATCCCACGGACATTGTTCCACTCGCGATCATTCCTTAAAAGTCCTTAAAGGAGGTCAAAATATGGAAATCAAAATCGATATCTCTGAGATTACTTGTGAAATTTGCAACGAACTTTTCCCTACCTTTGACGATATCATCACCCATCTATTCATCAAACACAAAATAGAATATGACAGAGAAGTAGAAATGGCAATAGAAGAGTATAGACTAGTCGATCTTAGTTGTTTAGCTTGCGATGAGAAATTCGCGTACTTCGGGTATTTGGTCTCTCACGTTAATAACAGTCATCCCAAAAATTGCCTCATCTGTGATAAGTGCGAACAAAAGTTTAATAAGAAACGAGATTTATTCTCTCATATAAAGAATTATCATAGAGAGGGTGGTTATCAGTGTGAGCTGTGTCCGTTGAGTTTTAGTTCGTTAAATATACTTAGAAAACATAGGAATAATCGTCATTTGACGCGATGTAGCATATGCCAGTTGAAGCTGCCTTCAGCAGCTTTGAAACAGAAACATATGGAAGTAGAACATCCAGACGACGGTTCTTTGCAATGCGATAATTGTTTCAAAGAATTTCACACAAAACAAGGTCTAAGAATGCACGTAAGAAAATGCAAAGGCGATGAACTGTTCGATATAGAAATAAGGAAAAAGGATTACGATCCTATGGATTTGGATCAAAACTATGAGGATCCAGTGAAAAGACCGAGCGTTAAACAGATTAGAGAAAACATAGTTATAGTCATCAACATGTCAACTGCTATTCCTTTTAATTTCTATAAGAATAAATTTAACTGTTTTTACTGTTCCAAAGACTTTCCTGATTCGGATTTAATGCGCGAACACACGATTATAGAACACCCTACGTGCGATGTTAAGCAGAAATGCATTAGGAAGTGTAGAGAGTCGGTTGCATGCGTTAAAATAGACATTTCTTCACTGGCCTGTAAATTATGCTTTGAATCACTTCCAGATCTAGATACACTGTTAGACCATTTAATTCTAAAACATAACGCGAATTACGACAAGACAATCACGACTTGTTTACAAGCTTACAGGCTTATCAAAGATCATATGGCGTGCCCTCACTGTCCAGGCGAAGTATTCAGGTTCTTTGGCACTCTGTTGAAACATATGAACAATAAACATACTAACAACAATATTATATGCGTATATTGTGGTCAAACATTTAGACGGGATCAGAATTTGCGCGTGCACATCTGGAGGCACCATAGGGATGGTAGATTTAAGTGTAACATATGCGGTGCCGAGTGTAATATACCTTCTAGGTTATACATGCACATGGCCAAAGCTCATGGGGTTAAGGCAGCTAAATGTCCGAAATGTCCGGAAAGTTTCGCTACTCAATACCTAAGACAGAAGCATTTAATAGAAGTACACGATTCTGGTCACAAATGCACGTATTGCGGTAAATTGTTCACTAGGAACTCCTTCATGAGGGATCACATTAGACGGACCCATTTGAAGGAGAAAAATGTAGAATGTTCCATATGCAATATGAAGTTTTTCAACAATATTCTTCTGAGGCGGCATATGGTGAAGCATAGTGGCGAGAAGAATTTTCACTGCGACATTTGCGGCGAAAGATTCTTCTGGCGGAAAAGCCTCCGGACGCACATGGCTAGGCATAATAAGCATATCAATCCTGTACATATTTAG
- Protein Sequence
- MDFDEIVVKESPGLCRCCLSEGCYKDLGSEYSWMSETEIYADMLLECFDISISQHPTGPNGSNRLICEVCITRLRDACNFKKQVLESEKKFVDMVGRGEFRPKVLLYQTQMKTELNMDLEEDTGADDGEVEYLEEDVDFVDEELLKSEDYAEASVSEDITVSALAVKGKRGRPKKTAAKPEKKAKVAKLEEKPKKAVAKGKKRPDSAVLQTKPLTATKRNRLMKGNATIVLENSTVVPFKWQRQNYLCFFCHKTFKSTDSLKDHTRDEHKKSNIKAAVSYLRRDEKVKIDVTVIECKLCGVKLDDLNSLLTHLTEKHDKTFTEQSGSFGLIPYKLDTGSSSFQCAVCTEEFQYFIKLNEHMNIHFGSYICELCGKGFLSQNRLRCHVLSHGAGFRCTMCPETFDSLTMRHNHETRVHNKEKLCKCFYCDETFPNYMQRKRHHHAVHNLEIQAFNCPICHKAFEIESKMQVHIKEVHVREKNFSCSMCDQKFFSKTHVQKHMVKHFGERVHQCEICKKSYARKQTLRDHMRIHNVKPRKYKGCESSSMRRRKNLQILFNNTTIIPFKWRGKYLCFYCSKDIAEYPALRKHTKSHGHCSTRDHSLKVLKGGQNMEIKIDISEITCEICNELFPTFDDIITHLFIKHKIEYDREVEMAIEEYRLVDLSCLACDEKFAYFGYLVSHVNNSHPKNCLICDKCEQKFNKKRDLFSHIKNYHREGGYQCELCPLSFSSLNILRKHRNNRHLTRCSICQLKLPSAALKQKHMEVEHPDDGSLQCDNCFKEFHTKQGLRMHVRKCKGDELFDIEIRKKDYDPMDLDQNYEDPVKRPSVKQIRENIVIVINMSTAIPFNFYKNKFNCFYCSKDFPDSDLMREHTIIEHPTCDVKQKCIRKCRESVACVKIDISSLACKLCFESLPDLDTLLDHLILKHNANYDKTITTCLQAYRLIKDHMACPHCPGEVFRFFGTLLKHMNNKHTNNNIICVYCGQTFRRDQNLRVHIWRHHRDGRFKCNICGAECNIPSRLYMHMAKAHGVKAAKCPKCPESFATQYLRQKHLIEVHDSGHKCTYCGKLFTRNSFMRDHIRRTHLKEKNVECSICNMKFFNNILLRRHMVKHSGEKNFHCDICGERFFWRKSLRTHMARHNKHINPVHI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01136017;
- 90% Identity
- -
- 80% Identity
- -