Oere012606.1
Basic Information
- Insect
- Osmoderma eremita
- Gene Symbol
- su(Hw)
- Assembly
- GCA_031763485.1
- Location
- JARFOC010001224.1:408421-415001[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 5.6e-06 0.0014 21.2 0.6 1 23 141 164 141 164 0.96 2 13 4e-05 0.01 18.5 0.2 2 23 196 218 195 218 0.96 3 13 3.5e-05 0.0089 18.7 1.8 1 23 224 246 224 246 0.98 4 13 9.1e-06 0.0023 20.5 2.2 1 21 252 272 252 273 0.95 5 13 1.1e-07 2.8e-05 26.5 0.5 1 23 284 306 284 306 0.98 6 13 0.00024 0.06 16.1 0.6 3 23 318 338 316 338 0.98 7 13 5e-06 0.0013 21.3 0.3 1 23 344 366 344 366 0.98 8 13 7.6e-05 0.019 17.6 0.7 1 23 372 394 372 394 0.99 9 13 2.8e-05 0.007 19.0 2.6 1 23 400 422 400 422 0.95 10 13 4.9e-05 0.012 18.2 1.9 1 23 428 451 428 451 0.94 11 13 2.5e-05 0.0062 19.2 2.8 2 23 458 479 457 479 0.96 12 13 6.6e-08 1.7e-05 27.3 0.6 1 23 485 507 485 507 0.99 13 13 8.3e-06 0.0021 20.6 3.1 2 23 514 536 513 536 0.94
Sequence Information
- Coding Sequence
- ATGGATACTGAGACTATACTATTGAAGACAGAACCTACCGAAGTGGTTGAGGTAAACGGCGCCCGTACAGAATTGAGAATTGTTCCACTTTTACACGTTTCAGAGGCTGATAATGTTATAACTACTTTGGAAGTAATAACTGATACGGatggcaattttaaaattaacacaatCGAACAAAATGAAAGTATCGAAGACGTGCAAAGAGAGATTGAGCTTGAGATGGATACAGATGAATATGTTGAAGAAAATAGTATCCAATATTCTGTTGATGAGTCTTTGGATCAAGATGAAGAGGACGAGGAATTTGAGAATGAGGGTGAAGATGAAATAGAAGACGATGATGATCCTGACGATCCTGTTTTTGAAATTGACAATTACAGACATGTGAAAGCTGAGAGAACAGATGATGAAGAAGAGTATGCATGcaacatttgtaaaaaaaattacaagacACCAGTCAGTTTAAAAAGACATATTACTGTATCTCATAGTGAAGAGTTGAAACAGGAGGATCCATTAGCCTTTGAGCTATGTGCTTGTTGCGGTGAACCTGTTGATTCAGCCCATACAACCGGCGATATTAAATGTGGAAAATGCGATAAACTCTTTGTAGTGCAAAGTAATTTAGACAGACACATGAGCATTGAACATAATGATAAGGATTTTTTCCAATGCGTAGAATGTCATCAACATTTCGACACAAAAGATACTTTAATTGTTCACATGGCGGTTCATCCCCTAACTAAACCATACTCTTGTAAGGTTTGTAATAAAGAGTTCACTAGAAAGTATCATCTTGATAGACATTTGATGCAGAGCGGCTGTGAAGGCCCACCCCGTAACATTTACAAATGCCAAGTCTGTGAAAAAGTCTTCATACGCAAAGATAACTTAAGGGTGCATTTGAGAGCCCATGCCGGCgaagtgaaaaagaaaaaaatattcggtTGCACTTATTGTGGTAAAGAATTTCAAGGACACGCTTTGTTGGGCGTGCACATGCGAACCCATACAGgAGAAAGACCATACCCTTGTGATTTATGCCCGAAGAGATTTCCGTCTAGCGGTGCGATGAAAAAACACAGGAGAATGCATACGGGCGAAAAACCATACGAATGTAGCGTATGTAAAAACCGGTTTGCCGCTAAAGAGACCTTGAACAGGCACGTTCGTACCCATACAGGCGACAAACCTCATTCTTGCCAATTTTGTGGGAAAAGCTTTATACAAGCGGCACAATTGAGAGCACACATCTTCCACCACACTGGAGAGAATGCATTTACTTGTCCCCATTGCAATAGAGCGTTTAATAGACGAGTTCGCCTGACTACTCATATTTTGTTTGTGCACGAAGGCGCTCAACCTATGCAATGCGATTATTGTGACAAGAATTTTTATAGGAAAGAAGATTTACACAGGCACACTTTATTACATAGCGGCGTAAAACCTTACAAATGCGAAGTATGCGACAAGTCTTTTGCTGTTAAGTCTTCTCTTAAATTGCATATGCTTACTCATCGTAAAGAACCACCTTGTAGTTGCGACGAATGTGGAAGGGCGTTTATTAGGCAGGATTGTCTTCTTAGGCATATGAGGGCGAAACATAGGGATGTTTTAGAAGATATTCTGGCAGGCGCTGAGAAAAAACGCTTACAGCAGCAGCTTTTGAGTGTTGCTCAAGATGTAGCTGCTGGTAACAAGTTTACCGAACAACAGAGCGGTATGTGGAATGAAATAACATTAACCGATtctataaaagaattattaactcTGCTGGTCGATGAAGCTACTTTGAGAGCGTTCGGGTGGCCTGATACCCCAGTTGATAAGATGTTAGATGCCGTTATAAAGAGGTGCGGACATCAACCCGCGTCCGACGAAGATTTCGATTATATTGGGCGCATGCGCGAAAATGCAAAACTCTTGTTTACAGTGGTTATAGATGATGATGCCATAAAAGCATTGTTAAATAATCAAACTGTAGACGAAGTAATCCTACATGTTTTGAGACTTGCTAAGAACGAGTAG
- Protein Sequence
- MDTETILLKTEPTEVVEVNGARTELRIVPLLHVSEADNVITTLEVITDTDGNFKINTIEQNESIEDVQREIELEMDTDEYVEENSIQYSVDESLDQDEEDEEFENEGEDEIEDDDDPDDPVFEIDNYRHVKAERTDDEEEYACNICKKNYKTPVSLKRHITVSHSEELKQEDPLAFELCACCGEPVDSAHTTGDIKCGKCDKLFVVQSNLDRHMSIEHNDKDFFQCVECHQHFDTKDTLIVHMAVHPLTKPYSCKVCNKEFTRKYHLDRHLMQSGCEGPPRNIYKCQVCEKVFIRKDNLRVHLRAHAGEVKKKKIFGCTYCGKEFQGHALLGVHMRTHTGERPYPCDLCPKRFPSSGAMKKHRRMHTGEKPYECSVCKNRFAAKETLNRHVRTHTGDKPHSCQFCGKSFIQAAQLRAHIFHHTGENAFTCPHCNRAFNRRVRLTTHILFVHEGAQPMQCDYCDKNFYRKEDLHRHTLLHSGVKPYKCEVCDKSFAVKSSLKLHMLTHRKEPPCSCDECGRAFIRQDCLLRHMRAKHRDVLEDILAGAEKKRLQQQLLSVAQDVAAGNKFTEQQSGMWNEITLTDSIKELLTLLVDEATLRAFGWPDTPVDKMLDAVIKRCGHQPASDEDFDYIGRMRENAKLLFTVVIDDDAIKALLNNQTVDEVILHVLRLAKNE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00070595; iTF_00434316; iTF_00308228; iTF_00626386; iTF_00627468; iTF_01499055; iTF_01121020; iTF_00956462;
- 90% Identity
- -
- 80% Identity
- -