Basic Information

Insect: Amphimallon solstitiale
Gene Symbol: su(Hw)
Assembly: GCA_963170755.1
Location: OY720676.1:118459890-118471640[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 9.5e-06 0.0031 21.0 0.2 1 23 135 158 135 158 0.96

2 13 0.00096 0.31 14.7 0.1 2 23 190 212 189 212 0.95

3 13 0.0031 1 13.1 0.6 1 23 218 240 218 240 0.97

4 13 2e-05 0.0065 20.0 2.0 1 21 246 266 246 267 0.95

5 13 3.5e-08 1.2e-05 28.6 0.4 1 23 278 300 278 300 0.98

6 13 1.6e-05 0.0052 20.3 0.1 1 23 310 332 310 332 0.98

7 13 7.3e-06 0.0024 21.4 0.3 1 23 338 360 338 360 0.98

8 13 7.2e-06 0.0024 21.4 1.2 1 23 366 388 366 388 0.99

9 13 4.1e-05 0.013 19.0 2.6 1 23 394 416 394 416 0.95

10 13 7.2e-05 0.024 18.2 1.9 1 23 422 445 422 445 0.94

11 13 1.5e-05 0.0048 20.4 1.2 2 23 452 473 451 473 0.96

12 13 1.7e-06 0.00056 23.3 1.8 1 23 479 501 479 501 0.99

13 13 1.2e-05 0.0038 20.7 3.1 2 23 508 530 507 530 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	9.5e-06	0.0031	21.0	0.2	1	23	135	158	135	158	0.96
2	13	0.00096	0.31	14.7	0.1	2	23	190	212	189	212	0.95
3	13	0.0031	1	13.1	0.6	1	23	218	240	218	240	0.97
4	13	2e-05	0.0065	20.0	2.0	1	21	246	266	246	267	0.95
5	13	3.5e-08	1.2e-05	28.6	0.4	1	23	278	300	278	300	0.98
6	13	1.6e-05	0.0052	20.3	0.1	1	23	310	332	310	332	0.98
7	13	7.3e-06	0.0024	21.4	0.3	1	23	338	360	338	360	0.98
8	13	7.2e-06	0.0024	21.4	1.2	1	23	366	388	366	388	0.99
9	13	4.1e-05	0.013	19.0	2.6	1	23	394	416	394	416	0.95
10	13	7.2e-05	0.024	18.2	1.9	1	23	422	445	422	445	0.94
11	13	1.5e-05	0.0048	20.4	1.2	2	23	452	473	451	473	0.96
12	13	1.7e-06	0.00056	23.3	1.8	1	23	479	501	479	501	0.99
13	13	1.2e-05	0.0038	20.7	3.1	2	23	508	530	507	530	0.94

Sequence Information

Coding Sequence: ATGGATCCTGAAACTATAATTTTGAAGACTGAGCCCTCAGATGAACTTGAGATAAATGGACACCGTACTGAGTTGAGGATTGTTCCTCTTTTGCATGTCACAAATTCTGATGTTATAACTACACTAGAGGTAACAACTGATACAgatggaaattttaaaattaatactaTTGAACAGAATGACAGCATTGGAGATGTTCAAAGAGAAATTGAGCTTGAAATGGATGCAGATGAATATGATGAGGAAAGCAATATACAATATTCTATCCAGGCATCTTTAGCTGAAGAAGAAGTACAGAATGATAGTGAAAGAGAACATGAAGATATTGATCCTGATGATCCAGATTGTGCAATGGAAGATTATGGAAATGTAAAAGCTGAAAGAGTTGAGGAGGAAGAAgaatatatttgcaatatttgtaAAAGAGGCTATAAAACACCAGCCagCTTGAAAAGACATATAACTGTAGCACATAGTGAAGAATTAAAACAAGAAGACCCTCTGGCTTTTGAATTATGTACATGCTGTGGTGAACCTGTGGATTCCGCTCAtacgACAGGTGATATAAAATGTGGAAGGTGCGATAAACTTTTTGTGCTGCCAAATAATTTAGAGAGACATATTAGCATTGAACATAATGAGAAAGATTACTATCAGTGTGTGGAATGCCATAATAATTACAATTCAAAAGAAGAGTTGATACAACACCTTGGCATTCACCCAATAACAAAACCTTATTCGTGTAAAGTATGCAATAAGGAATTTACTAGAAGATATCATCTTGATAGGCATTTGATGCAGACTGATTGTGATGGACCACCAcgaaataattataaatgtcagGTATGTGACAAGGTGTTTGCACGGAAGGACAATTTAAGAGTTCATCTACGTGCGCATGCTGGTGAagtgaaaaagaagaaaatttttGCTTGTACATACTGTGGAAAAGAATTCCAAGGTTATGCATTATTGGCAGTACACATGCGAACACATACAGGTGAGAGACCATATCCTTGCGATTTATGTCCTAAGAGATTTCCATCTAGTGGTGCTATGAAAAAACATAGAAGAATGCATACTGGTGAAAAGCCCTATGAGTGTACTTTGTGCAAGAAACGATTTGCTGCTAAGGAAACTTTGAATAGACATGTACGTACCCATACAGGAGATAAACCTCATTCTTGTCAGTTTTGCGGGAAGAGTTTTATTCAAGCAGCACAATTAAGAGCACACATTTTTCATCATACTGGAGAAAATGCGTTTACATGCCCGCATTGCAATAGAGCCTTTAATAGACGAGTACGATTAACTACTCATATTTTGTTCGTTCACGAAGGTGCTCAACCCATGCAGTGCGATTATTGCGAGAAAAATTTTTATCGAAAAGAGGATTTGCAGAGACACACATTATTACACAGCGGTATAAAACCTTTCAAATGTGATGCATGTGGTAAATGTTTCGCCGTTAAGTCATCTCTAAAGTTACATATGCTTACACACCGAAAAGAACCTCCTTGTAGTTGCGAAGAATGCGGTAGAGCATTTATCAGACAGGATTGCCTTCTTAGACATATGAGAGCAAAACACAGGGATGTTTTAGAAGATATTATGGCTGGTGCAGAGAAAAAACGATTGCAACAACAACTTTTGAGTGTTGCCCAAGATGTAGCTGCAGGAAATAAATTTACTGAACAGCAGAGCGGTATTTGGAATGAGATAACACTGACCGACTCGATAAAAGAATTGTTGACACTACTCGTCGATGAAACAACGTTGAGAGCTTTCGGTTGGCCTGATACACCTGTTGACAAAATGTTAGACGCTGTCATAAAGAGATGCGGTCACCAACCTGCATCTGATGAGGATTTTGATTATATTGGAAGGATGCGCGAAAATGCAAAACTATTATTTACAGTTGTAATAGATGATGAAGCGATAAAGTCACTTTTAAATAATCAAACTGTAGATGAAGTTATTTTGCATGTTTTACGACTTGCTAAAAATGAATAA
Protein Sequence: MDPETIILKTEPSDELEINGHRTELRIVPLLHVTNSDVITTLEVTTDTDGNFKINTIEQNDSIGDVQREIELEMDADEYDEESNIQYSIQASLAEEEVQNDSEREHEDIDPDDPDCAMEDYGNVKAERVEEEEEYICNICKRGYKTPASLKRHITVAHSEELKQEDPLAFELCTCCGEPVDSAHTTGDIKCGRCDKLFVLPNNLERHISIEHNEKDYYQCVECHNNYNSKEELIQHLGIHPITKPYSCKVCNKEFTRRYHLDRHLMQTDCDGPPRNNYKCQVCDKVFARKDNLRVHLRAHAGEVKKKKIFACTYCGKEFQGYALLAVHMRTHTGERPYPCDLCPKRFPSSGAMKKHRRMHTGEKPYECTLCKKRFAAKETLNRHVRTHTGDKPHSCQFCGKSFIQAAQLRAHIFHHTGENAFTCPHCNRAFNRRVRLTTHILFVHEGAQPMQCDYCEKNFYRKEDLQRHTLLHSGIKPFKCDACGKCFAVKSSLKLHMLTHRKEPPCSCEECGRAFIRQDCLLRHMRAKHRDVLEDIMAGAEKKRLQQQLLSVAQDVAAGNKFTEQQSGIWNEITLTDSIKELLTLLVDETTLRAFGWPDTPVDKMLDAVIKRCGHQPASDEDFDYIGRMRENAKLLFTVVIDDEAIKSLLNNQTVDEVILHVLRLAKNE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01123946;
90% Identity: iTF_00434316;
80% Identity: -