Basic Information

Insect: Dynastes hyllus
Gene Symbol: su(Hw)
Assembly: GCA_029619255.2
Location: JAROYC020000003.1:46281696-46306906[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 2.8e-06 0.00034 22.2 1.9 1 23 147 170 147 170 0.96

2 13 0.0017 0.22 13.4 1.3 2 23 202 224 201 224 0.96

3 13 0.00014 0.018 16.9 0.2 1 23 230 252 230 252 0.96

4 13 0.00022 0.028 16.2 4.5 1 21 258 278 258 279 0.95

5 13 1.3e-07 1.6e-05 26.5 0.5 1 23 290 312 290 312 0.98

6 13 5.3e-05 0.0066 18.2 0.5 1 23 322 344 322 344 0.98

7 13 1.8e-06 0.00022 22.8 0.2 1 23 350 372 350 372 0.98

8 13 4.3e-06 0.00054 21.6 1.5 1 23 378 400 378 400 0.99

9 13 3e-05 0.0037 19.0 2.6 1 23 406 428 406 428 0.95

10 13 5.3e-05 0.0066 18.2 1.9 1 23 434 457 434 457 0.94

11 13 1.6e-05 0.002 19.8 1.4 2 23 464 485 463 485 0.96

12 13 5.8e-07 7.2e-05 24.4 2.7 1 23 491 513 491 513 0.99

13 13 9e-06 0.0011 20.6 3.1 2 23 520 542 519 542 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	2.8e-06	0.00034	22.2	1.9	1	23	147	170	147	170	0.96
2	13	0.0017	0.22	13.4	1.3	2	23	202	224	201	224	0.96
3	13	0.00014	0.018	16.9	0.2	1	23	230	252	230	252	0.96
4	13	0.00022	0.028	16.2	4.5	1	21	258	278	258	279	0.95
5	13	1.3e-07	1.6e-05	26.5	0.5	1	23	290	312	290	312	0.98
6	13	5.3e-05	0.0066	18.2	0.5	1	23	322	344	322	344	0.98
7	13	1.8e-06	0.00022	22.8	0.2	1	23	350	372	350	372	0.98
8	13	4.3e-06	0.00054	21.6	1.5	1	23	378	400	378	400	0.99
9	13	3e-05	0.0037	19.0	2.6	1	23	406	428	406	428	0.95
10	13	5.3e-05	0.0066	18.2	1.9	1	23	434	457	434	457	0.94
11	13	1.6e-05	0.002	19.8	1.4	2	23	464	485	463	485	0.96
12	13	5.8e-07	7.2e-05	24.4	2.7	1	23	491	513	491	513	0.99
13	13	9e-06	0.0011	20.6	3.1	2	23	520	542	519	542	0.94

Sequence Information

Coding Sequence: ATGGAATCTGAAACCATAGTTTTAAAGACGGAGCCATCAGAAGAAATTGAGTTAAATGGAAACCGTACAGAATTAAGGATTGTCCCTCTTTTGCACGTTACAGATTCTGATGTTATAACAACATTGGAAGTAACAACTGATACagatggaaattttaaaatcaatacgATTGAGCAGAATGATGTCATCAACGATGTTCAAAGAGAAATCGAACTTGAAATGGAAGCGGATGAGTATGTTGAAGAAAATAGTATACAATATTCTTTAGAGGGATCATTGgatcaagaagaagaagaagatgataatgatgatgatgatgttaACTTAAATGATATTGAAGATGAAGTGGATGGTGAGGATGAAGATCCAGATGATCCGGAATTTGATATTGACGAATATCAAAAtctaaaaactgaaaaaattgaTGAGGAAGACCTGTATGTCTGTAATATATGTAAACGAAGCTATAAAACACCAGCAagcTTGAAGAGGCATATCACAGTATGTCATAGTGAGGAATTAAAGCAAGAAGATCCTTTAGCGTTTGAGCTATGTACTTGCTGCGGAGAACCTGTTGATTCTGCTCATACGaCGGGTGACATTAAATGTGGAAAATGCGAAAAACTTTTTCATCTACAAAGCAATTTAGATCGTCATATGAGTATTGAGCATAATGAAAATGATTTCTATCAATGCATAGAATGTAGCCTTACATTTACTACTAAAAGTGATCTAATAGAACATATGGGTATACATCCACTATCTAAACCGTATTGCTGCAAAGTATGTAATAAAGATTTTACTAGAAGATATCATCTTGATAGACACCTTATGCAAACTGGTTGCGATGGACCACCGAAGAATGCCTTTAAATGTCAGGTTTGCGAAAAAGTATTTGCACGCAAGGATAATTTGAGGGTGCATTTAAGAGCACATGCGGgagaagtaaaaaagaaaaaaattttcgcttgCACTTATTGTGGTAAAGAATTTCAAGGACATGCTTTATTAGGCGTACATATGCGAACTCATACAGGTGAAAGACCATATCCTTGTGATATCTGCCCGAAAAGATTTCCATCAAGTGGTGCTATGAAAAAACATAGAAGAATGCACACAGGTGAAAAACCATATGAATGTAACACATGTAAAAAACGGTTTGCTGCTAAAGAAACTTTGAACAGGCACGTGCGTACCCACACCGGTGACAAACCTCATTCCTGTCAATTTTGTGGGAAGAGTTTTATACAGGCAGCACAACTACGAGCACACATCTTCCATCACACTGGAGAAAACGCCTTCACGTGCCCACATTGCAACAGAGCTTTTAATAGGCGTGTCCGTTTAACCACGCACATCTTGTTTGTTCATGAAGGTGCACAGCCTATGCAATGTGATTTCTGTGATAAGAATTTCTACAGAAAAGAAGATTTACAAAGACACACTTTGCTACACAGTGGTCTAAAACCGTTTAAATGCGAAGTATGTAATAAATGCTTCGCTGTGAAGTCATCTCTGAAACTACATATGCTCACTCACCGCAAAGAGCCTCCATGCAGTTGTGATGAATGTGGAAGAGCATTTATTAGACAGGATTGTTTATTGAGACACATGAGAGCGAAGCACAGAGATGTGTTGGAAGACATTATGGCCAGTGCAGAAAAGAAACGTTTACAGCAACAGCTTTTAAGTGTCGCCCAAGACGTTGCTGctggaaataaatttactgaacAGCAAAATGGCATATGGAACGAAATAACATTAACTGATTCGATAAAAGAACTGTTGACATTACTGGTAGATGAAGCGACCTTAAAAGCATTTGGTTGGCCCGATACTCCAGTCGACAAAATGTTGGATGCAGTTATAAAACGATGTGGACATCAACCTGCATCTGACGAAGATTTTGATTATATAGGGCGGATGCGCGAAAATGCAAAGTTGTTATTTACAGTTGTTATAGACGATGACGCCATAAAAGctcttttaaataatcaaactgTCGACGAGGTAATTCTCCATGTTTTGAGACTCGctaaaaatgaataa
Protein Sequence: MESETIVLKTEPSEEIELNGNRTELRIVPLLHVTDSDVITTLEVTTDTDGNFKINTIEQNDVINDVQREIELEMEADEYVEENSIQYSLEGSLDQEEEEDDNDDDDVNLNDIEDEVDGEDEDPDDPEFDIDEYQNLKTEKIDEEDLYVCNICKRSYKTPASLKRHITVCHSEELKQEDPLAFELCTCCGEPVDSAHTTGDIKCGKCEKLFHLQSNLDRHMSIEHNENDFYQCIECSLTFTTKSDLIEHMGIHPLSKPYCCKVCNKDFTRRYHLDRHLMQTGCDGPPKNAFKCQVCEKVFARKDNLRVHLRAHAGEVKKKKIFACTYCGKEFQGHALLGVHMRTHTGERPYPCDICPKRFPSSGAMKKHRRMHTGEKPYECNTCKKRFAAKETLNRHVRTHTGDKPHSCQFCGKSFIQAAQLRAHIFHHTGENAFTCPHCNRAFNRRVRLTTHILFVHEGAQPMQCDFCDKNFYRKEDLQRHTLLHSGLKPFKCEVCNKCFAVKSSLKLHMLTHRKEPPCSCDECGRAFIRQDCLLRHMRAKHRDVLEDIMASAEKKRLQQQLLSVAQDVAAGNKFTEQQNGIWNEITLTDSIKELLTLLVDEATLKAFGWPDTPVDKMLDAVIKRCGHQPASDEDFDYIGRMRENAKLLFTVVIDDDAIKALLNNQTVDEVILHVLRLAKNE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01123946;
90% Identity: iTF_00627468; iTF_01499055; iTF_01121020; iTF_00956462;
80% Identity: iTF_00627468;