Basic Information

Insect: Cetonia aurata
Gene Symbol: su(Hw)
Assembly: GCA_949128085.1
Location: OX421883.1:57655593-57671402[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 1.8e-06 0.00032 22.5 0.4 1 23 135 158 135 158 0.96

2 13 0.0011 0.2 13.8 0.9 2 23 190 212 189 212 0.95

3 13 7.4e-05 0.014 17.4 2.3 1 23 218 240 218 240 0.98

4 13 1.1e-05 0.002 20.0 2.9 1 21 246 266 246 267 0.95

5 13 1.7e-07 3.1e-05 25.8 0.5 1 23 278 300 278 300 0.98

6 13 8.9e-05 0.016 17.2 1.6 3 23 312 332 310 332 0.98

7 13 4.8e-06 0.00087 21.2 0.3 1 23 338 360 338 360 0.98

8 13 9.2e-06 0.0017 20.3 1.7 1 23 366 388 366 388 0.99

9 13 2.3e-05 0.0043 19.0 2.6 1 23 394 416 394 416 0.95

10 13 1.6e-05 0.003 19.5 1.7 1 23 422 445 422 445 0.94

11 13 8.4e-06 0.0015 20.4 1.2 2 23 452 473 451 473 0.96

12 13 1.2e-06 0.00022 23.1 0.6 1 23 479 501 479 501 0.98

13 13 7e-06 0.0013 20.7 3.1 2 23 508 530 507 530 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	1.8e-06	0.00032	22.5	0.4	1	23	135	158	135	158	0.96
2	13	0.0011	0.2	13.8	0.9	2	23	190	212	189	212	0.95
3	13	7.4e-05	0.014	17.4	2.3	1	23	218	240	218	240	0.98
4	13	1.1e-05	0.002	20.0	2.9	1	21	246	266	246	267	0.95
5	13	1.7e-07	3.1e-05	25.8	0.5	1	23	278	300	278	300	0.98
6	13	8.9e-05	0.016	17.2	1.6	3	23	312	332	310	332	0.98
7	13	4.8e-06	0.00087	21.2	0.3	1	23	338	360	338	360	0.98
8	13	9.2e-06	0.0017	20.3	1.7	1	23	366	388	366	388	0.99
9	13	2.3e-05	0.0043	19.0	2.6	1	23	394	416	394	416	0.95
10	13	1.6e-05	0.003	19.5	1.7	1	23	422	445	422	445	0.94
11	13	8.4e-06	0.0015	20.4	1.2	2	23	452	473	451	473	0.96
12	13	1.2e-06	0.00022	23.1	0.6	1	23	479	501	479	501	0.98
13	13	7e-06	0.0013	20.7	3.1	2	23	508	530	507	530	0.94

Sequence Information

Coding Sequence: ATGGATACTGAAACCATAATATTAAAGACGGAACCTACCGAAGTGGTTGAGGTAAATGGCAGTCGTACAGAATTGAGAATTGTCCCACTTTTACACGTTTCAGAGGCTGATGTCATAACTGCATTGGAAGTAACAACTGATACggatggaaattttaaaattaatacaattgaacaaaatgaaagTATTGACGTTCAAAGAGAGATTGAGCTTGAGATGGACACAGAAGAATATGTTGAAGACAATAGCATTCAATATTCGATTGAAGAATCGTTGGAAGAGGAAgatgaagaggaagaagaagtgGAGGAAGGTGAAGATGAAATAGAAGAAGAAGGAGATCTAGATTTTGAACCAAACAATTACAGTGGTATAGAAATTGAGAAACCATACGATGAAGAATATGCATGCAACATTTGTAAAAGAAGTTATAAGACACCAGCAagCCTAAAACGACATATAACTGTATCCCACGGTGAAGTATTAAAGCAAGAAGATCCCTTGGCATTTGAGCTCTGTACTTGCTGCGGTGAACCTGTCGATTCTGCTCACACAACGGGCGACATCAAATGTGGAAAATGCGATAAACTCTTCGTACTtgaatgtaatttaaatagacACATAAGTATTGAACATAATGAAAAGGATTTTTACCAGTGCGTGGAGTGTCATCACTATTTCAATACAAAAGATAGCTTAATCGAACATATGGCAATTCATCCTCTAACACAACCATATTCCTGTAAAgtttgcaataaaaagttcACTAGACGGTATCACCTTGACAGACATTTGATGCAGAGTGGTTGTGATGGTCCACCGCGTAATCTTTTTAAGTGCCAgGTTTGCGAAAAAGCATTTGTGCGCAAAGATAATTTAAGGGTGCATTTGAGAGCTCATGCTGGTgaagtgaaaaagaaaaaaatatttggttgcTCTCATTGCGGCAAAGAATTTCAAGGTCACGCATTATTAGCTGTGCATATGCGAACTCATACAGGAGAAAGGCCATACCCTTGCGATTTGTGTCCAAAAAAATTTCCATCTAGTGGTGCAATGAAGAAACATAGAAGAATGCATACGGGTGAAAAGCCATATGAGTGCAAGACATGTAAAAGACGATTTGCTGCCAAAGAAACCTTGAATAGGCATGTCCGTACTCATACAGGCGACAAGCCCCATTCTTGTCAATTCTGTGGGAAAAGTTTTATACAGGCGGCACAACTAAGGGCGCACATATTTCATCATACTGGAGAAAACGCATATACCTGTCCCCATTGCAACAGAGCGTTTAATAGAAGAGCGCGTTTAactacacatattttatttgtgcACGAGGGTGCCCAGCCGATGCAATGCGATTATtgtgaaaagaatttttatagaaaagaaGATTTACAGAGGCACACTTTATTACACAGTGGCATAAAGCCTTTTAAATGCGACGTATGCGGTAAAAGTTTTGCTGTAAAATCTTCTCTGAAATTGCACAATCTCACTCATCGCAAGGAACCACCTTGTAGTTGCGACGAATGTGGAAGGGCTTTTATCAGACAGGATTGTCTCCTTAGGCATATGAGAGCGAAACACAGGGATGTTTTAGAAGATATTATGGCAGGAGCTGAGAAAAAGCGTTTACAGCAACAACTTTTGAGTGTTGCTCAAGATGTAGCTGCCGGAAACAAATTTACTGAGAAACAGAGCGGTATATGGAATGAAATAACGTTAACTGATTCCATAAAGGAGTTATTAACTCTACTAGTGGACGAAGCTACCTTAAGAGCATTCGGGTGGCCTGACACTCCGGTTGATAAAATGTTAGATGCTGTTATAAAGAGATGTGGTCATCAACCTGCGTCCGACGAAGATTTCGATTATATTGGGCGGATGCGTGAAAACGCAAAACTCCTGTTTACAGTTGTTATAGATGACGATGCTATAAAAGCACTATTAAATAATCAAACTGTAGATGAAGTAATTCTTCATGTTTTGCGACTCGCTAAGAACGAGTAG
Protein Sequence: MDTETIILKTEPTEVVEVNGSRTELRIVPLLHVSEADVITALEVTTDTDGNFKINTIEQNESIDVQREIELEMDTEEYVEDNSIQYSIEESLEEEDEEEEEVEEGEDEIEEEGDLDFEPNNYSGIEIEKPYDEEYACNICKRSYKTPASLKRHITVSHGEVLKQEDPLAFELCTCCGEPVDSAHTTGDIKCGKCDKLFVLECNLNRHISIEHNEKDFYQCVECHHYFNTKDSLIEHMAIHPLTQPYSCKVCNKKFTRRYHLDRHLMQSGCDGPPRNLFKCQVCEKAFVRKDNLRVHLRAHAGEVKKKKIFGCSHCGKEFQGHALLAVHMRTHTGERPYPCDLCPKKFPSSGAMKKHRRMHTGEKPYECKTCKRRFAAKETLNRHVRTHTGDKPHSCQFCGKSFIQAAQLRAHIFHHTGENAYTCPHCNRAFNRRARLTTHILFVHEGAQPMQCDYCEKNFYRKEDLQRHTLLHSGIKPFKCDVCGKSFAVKSSLKLHNLTHRKEPPCSCDECGRAFIRQDCLLRHMRAKHRDVLEDIMAGAEKKRLQQQLLSVAQDVAAGNKFTEKQSGIWNEITLTDSIKELLTLLVDEATLRAFGWPDTPVDKMLDAVIKRCGHQPASDEDFDYIGRMRENAKLLFTVVIDDDAIKALLNNQTVDEVILHVLRLAKNE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01123946;
90% Identity: -
80% Identity: -