Basic Information

Insect: Osmia bicornis
Gene Symbol: stc
Assembly: GCA_907164935.1
Location: NC:14112625-14118888[+]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 4 2.4e+04 -4.4 1.6 15 19 558 562 557 562 0.81

2 14 0.14 8.5e+02 0.5 0.2 4 10 591 597 590 598 0.95

3 14 1.9e-06 0.011 16.1 14.5 3 19 606 622 605 622 0.91

4 14 4.4e-06 0.027 14.9 17.4 1 18 658 675 658 676 0.97

5 14 1.9e-05 0.11 12.9 14.0 1 19 714 732 714 732 0.96

6 14 2.4e-05 0.14 12.6 12.9 4 18 779 793 772 794 0.86

7 14 3.2 1.9e+04 -3.8 2.0 5 10 823 828 823 828 0.93

8 14 0.0012 7.1 7.2 8.4 1 11 834 844 834 845 0.97

9 14 2.3 1.4e+04 -3.4 0.7 4 10 849 855 848 855 0.87

10 14 4e-10 2.4e-06 27.9 13.8 1 19 861 879 861 879 0.98

11 14 1 6.2e+03 -2.2 0.6 5 10 907 912 907 913 0.89

12 14 4 2.4e+04 -8.6 11.5 10 19 926 936 915 936 0.71

13 14 4.9e-07 0.003 18.0 13.7 1 16 972 987 972 998 0.86

14 14 1.7e-05 0.11 13.0 14.2 1 19 1004 1023 1004 1023 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	4	2.4e+04	-4.4	1.6	15	19	558	562	557	562	0.81
2	14	0.14	8.5e+02	0.5	0.2	4	10	591	597	590	598	0.95
3	14	1.9e-06	0.011	16.1	14.5	3	19	606	622	605	622	0.91
4	14	4.4e-06	0.027	14.9	17.4	1	18	658	675	658	676	0.97
5	14	1.9e-05	0.11	12.9	14.0	1	19	714	732	714	732	0.96
6	14	2.4e-05	0.14	12.6	12.9	4	18	779	793	772	794	0.86
7	14	3.2	1.9e+04	-3.8	2.0	5	10	823	828	823	828	0.93
8	14	0.0012	7.1	7.2	8.4	1	11	834	844	834	845	0.97
9	14	2.3	1.4e+04	-3.4	0.7	4	10	849	855	848	855	0.87
10	14	4e-10	2.4e-06	27.9	13.8	1	19	861	879	861	879	0.98
11	14	1	6.2e+03	-2.2	0.6	5	10	907	912	907	913	0.89
12	14	4	2.4e+04	-8.6	11.5	10	19	926	936	915	936	0.71
13	14	4.9e-07	0.003	18.0	13.7	1	16	972	987	972	998	0.86
14	14	1.7e-05	0.11	13.0	14.2	1	19	1004	1023	1004	1023	0.97

Sequence Information

Coding Sequence: ATGGCCACATGGGATGGTTCTGATTCTAAACCAGaggatcaaaattattatacatattttaatgaaaatattactgGTCCTGCAGCAGGAACCTGGACATTCTTTcctaataatgtaaataatgaGTATTTACCAGCTAATCGCGAATATTATGTACAAAATGAACCTTTATTTGAGCAAAATGACCCAAATACTTCCTATCGTACGAACACAGATGGTTGGTCAATGTCATCTGTAGCCAGTATTTATCAGAAACATGTAATGAGTATAGTAGATAATGCTGAAATGTCAGGCAATCAAAAATGCTTTACAAGTACTATTAAACCTCAACAAAGTTTTGCATCTAATAACCATTGGAAGGATGATTACAATTTAGAAACAATTGAAACTAAACATAATTTGGtagaaagaataaagaaaacagGTAATTCGAATCTTCATGTTACGGCTGAAGAGTTTGTGCCAAATAATACAGAACTGGATGATAAAAGATTtagattacaaaataaaagGTCTATCCATACTACGGATGCTTCTGTTAAAAATAGTAGCGAAACATTAGACAAacatacattttataatactAGTAGACACGAAAGAAAATACAATACTAGGAGAAACTCAAATTATAAACCTAAAGAAGGACAACAGGATAATCAATTTCATAAACgaaatacatataaaaattcGTATCAACAAGGAAAAGTCTCCCATAAATTTCAAGGTAATAAATGTTTTACTAACAAATACTATTCAGATAAATCACAGGCAGATGTAAAAGGTATAGATGAGAATATATTAGATAAGGATACAATGAATAATACCGATGCCTCTAGTAGTAAAGAATTTTATGCAAcaagtttaaataaaagtgAATTATTATCGagtatggaaataaatttgaataacaATAAAAGAGCATTAAACAAGAGGAGTGGTGAAAGTAGTACCGTTAGAGATGAAGGTTTACAAGAAAATGATACAAAGCAGTGTAATAATCAGGTTAAGGAATTCGCTTACTATGGTTCTGGTTCAAAGCAATTCCATAATAATCGCAGAAACACAAAGAAGTATCCgtacaatattaaatacaacagagaagaaaataattttaaagaaaagagACGGAATTATCAAGGATATAGTAGAGAAAATTTTAGTAAAGAGCATAAATCTAAAGTAATAAAGGAGCAAATGTGTAGAAACGGAGAACATAACGAGCTTCGAGAATGTTGTAGAGACGAAATGGGACttgaaataaaggaaataaaagaaaagaaatataattaccaAGGGTTTAATGAATCAAAAGAATATAACAAggaaaacaaaaatgaaatgttcttgaaagaaaaagatagaaataaaGGTTCTGTATTTGttgaaaacaatgaaaaaggaaatgaaCATTGGAATAACAAAAGAGAAAGCAGCGAAAGAAATAGTGTTCAAAAATgggggaaaaataaaaaatcttatgttgATGACGACGCCAATCAAAGGGAGAGATTAGCGGATCAACTAAGTAGGGGGCAACTAGAATGTTTAGTATGTTGTGAATACATTAAACAGAATGATTATATTTGGTCATGCTCTAATTGTTACCACGTTCTACATTTAAAGTGTATTAAAAAATGGGCAAAATCGTCGCAAGTAGAAAATGGTTGGAGATGTCCAGCCTGTCAAAATATGAGCGAAACGATTCCTGAAAACTGTTACTGTTTTTGTGGCAAGACAAAAGCACCTGAATGGAATCGTAGGGATGTTGCACATTCTTGCGGCGAAGTTTGTGGTAGACTACTATCAAAAAATTGTACTCACAAATGCACGCTTCTGTGTCATCCAGGCTCTTGTCCACCGTGTACAGCAATGGTAACAAAGTATTGTGGTTGCGGTAAAACATTGCAAACAGTCCAGTGCAGCGGCCATAAATTATTGCTCTGTGATTCTATATGTGATAAACTCTTAAATTGTGGTAAGCACAAATGTGAAAGACAATGCCACCATGGAGAATgtgaaaattgtaataaaacagTAACGCAAAtatGTTATTGCGGTAAAAATACAAGAGATGTTACATGTCAGAGCAATATTTTGCTTACATATTCTTGCGAGACTACTTGTGGTAAATTATTAGATTGTGGTAATCATACTTGTACAAAGTTATGCCATGCTGATGCTTGCGAGTGTTGTTCTTTAACTCCGGAAAAAATTACAACTTGTTGCTGCGGACAGACGCCATTAACAGAAATAAGACAAACTTGCTTAGACCCAGTTCCAGTATGTGATAAAGTTTGTTCCAAAAAACTAAAGTGTGGACAACCTAGTAGTCCTCATAGCTGTAAAGCAAAATGTCATCAAGGGGATTGCCCTAACTGCGACTTAACTACCGATGTTAAGTGTCGTTGCGGAAATATGGACAGAGAAATAGCTTGTAAAGATTTAACATCGAAAGCTGATGACGCTCGATGTGAGAAGAAGTGCACAAAAAAACGTTCTTGCGGAAAGCATAAATGTAATCAGTTATGTTGTATAGAAATAGAACATGTCTGTCCATTGGTGTGTTCTAAAACCTTAAGTTGCGGTAGACATAAATGTGAACAAAGTTGTCATAAAGGGAGATGTCAACCTTGTTGGCACAGTAGTTTTGATGAATTATACTGTGAATGCGGAGCTGCTGTTATATATCCTCCTGTTCCTTGTGGTACGAGAAGACCTACTTGCGATAGGCCCTGTTCTCGTCAACACTCTTGTGGCCACGAAGTACTACATAATTGTCACAGTGAACCAACCTGCCCTCCTTGCACTGTTCTTACTCAGAGATGGTGTCACGGTAAACACGAACTTCGAAAAGCTGTTCCATGTTATGTTACTGAAATTTCATGTGGTTTACCATGTAATAAACCTATATCGTGCGGTCGGCATAAATGTATCAGTACTTGTCATACGGGCCCATGTGAAAAACCAGGACAACAATGTATTCAACCTTGCACTACTCCAAGGGAAATGTGCGGACATGTTTGTGCAGCTCCGTGTCATGAGGGTAAATGTCCAGACACTCCGTGTAAGGAGATGGTAAAGGTGACATGTCAATGTGGACATAGATCTATGTCCCGTGTGTGTGCTGAAAATTCTAAAGAATATCAGAGAATAGCAAGCAGTATATTAGCTAGTAAAATGACTGATATGCAGTTGGGTCATTCTATTAATTTGGACCAAGTATTTGGCCAAGGTGCAAAGAAGCAAAATCAGTTGAAAACTTTAGAGTGCAACGATGAATGTAAAACGATAGAACGTAATAGAAAACTGGCGCTAGGTTTGCAAATAGCGAATCCAGATTTAAGCGGAAAATTAATGCCTAAATATAGTGATTTCATGAAACAGTGGGCTAAGAAAAATCCGCAGTTTTGTCAAATGGTTCATGATAAATTAACCGAATTGGTTCAATTAGCGAAAATTTCCAAACAGAAGTCTCGTAGTTATTCTTTTGATTGTATGAACAAAGATAAGCGTCATTTTGTTCATGAATCTTGTGAACATTTTGGCTGTGAAAGTCAAGCATATGATCAAGAACCAAAAAGAAATGTTGTAGCTACTGCTGTAAAGGATAAGTGTTGGTTACCGAGCTATAGTTTATTAGAAATCGTGCAGCGAGAAAATGGTCAAAGAAAAGTTCCAGGTCCGATGCTGAATACCTTAAAAACCGATGGACCTGTAAAgACAATATTATCACTGCCTACACAGAGGAGCCAAAAAACAGAAATACAGTCAACCGCGAAGACAGCTGAACCAGAAATAGATTACTTTGATTATCATggttaa
Protein Sequence: MATWDGSDSKPEDQNYYTYFNENITGPAAGTWTFFPNNVNNEYLPANREYYVQNEPLFEQNDPNTSYRTNTDGWSMSSVASIYQKHVMSIVDNAEMSGNQKCFTSTIKPQQSFASNNHWKDDYNLETIETKHNLVERIKKTGNSNLHVTAEEFVPNNTELDDKRFRLQNKRSIHTTDASVKNSSETLDKHTFYNTSRHERKYNTRRNSNYKPKEGQQDNQFHKRNTYKNSYQQGKVSHKFQGNKCFTNKYYSDKSQADVKGIDENILDKDTMNNTDASSSKEFYATSLNKSELLSSMEINLNNNKRALNKRSGESSTVRDEGLQENDTKQCNNQVKEFAYYGSGSKQFHNNRRNTKKYPYNIKYNREENNFKEKRRNYQGYSRENFSKEHKSKVIKEQMCRNGEHNELRECCRDEMGLEIKEIKEKKYNYQGFNESKEYNKENKNEMFLKEKDRNKGSVFVENNEKGNEHWNNKRESSERNSVQKWGKNKKSYVDDDANQRERLADQLSRGQLECLVCCEYIKQNDYIWSCSNCYHVLHLKCIKKWAKSSQVENGWRCPACQNMSETIPENCYCFCGKTKAPEWNRRDVAHSCGEVCGRLLSKNCTHKCTLLCHPGSCPPCTAMVTKYCGCGKTLQTVQCSGHKLLLCDSICDKLLNCGKHKCERQCHHGECENCNKTVTQICYCGKNTRDVTCQSNILLTYSCETTCGKLLDCGNHTCTKLCHADACECCSLTPEKITTCCCGQTPLTEIRQTCLDPVPVCDKVCSKKLKCGQPSSPHSCKAKCHQGDCPNCDLTTDVKCRCGNMDREIACKDLTSKADDARCEKKCTKKRSCGKHKCNQLCCIEIEHVCPLVCSKTLSCGRHKCEQSCHKGRCQPCWHSSFDELYCECGAAVIYPPVPCGTRRPTCDRPCSRQHSCGHEVLHNCHSEPTCPPCTVLTQRWCHGKHELRKAVPCYVTEISCGLPCNKPISCGRHKCISTCHTGPCEKPGQQCIQPCTTPREMCGHVCAAPCHEGKCPDTPCKEMVKVTCQCGHRSMSRVCAENSKEYQRIASSILASKMTDMQLGHSINLDQVFGQGAKKQNQLKTLECNDECKTIERNRKLALGLQIANPDLSGKLMPKYSDFMKQWAKKNPQFCQMVHDKLTELVQLAKISKQKSRSYSFDCMNKDKRHFVHESCEHFGCESQAYDQEPKRNVVATAVKDKCWLPSYSLLEIVQRENGQRKVPGPMLNTLKTDGPVKTILSLPTQRSQKTEIQSTAKTAEPEIDYFDYHG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01123369; iTF_00964170; iTF_00962196; iTF_00963558; iTF_00964810; iTF_00962880;
90% Identity: iTF_01123369;
80% Identity: -