Basic Information

Insect: Megachile leachella
Gene Symbol: stc_1
Assembly: GCA_963576845.1
Location: OY756248.1:302828-307324[+]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 2 3.5e+04 -4.4 1.6 15 19 550 554 549 554 0.81

2 14 0.069 1.2e+03 0.6 0.2 4 10 583 589 582 590 0.95

3 14 6.7e-06 0.12 13.4 13.8 3 19 598 614 597 614 0.91

4 14 9.5e-07 0.017 16.1 17.9 1 18 650 667 650 668 0.97

5 14 1.8e-08 0.00032 21.6 9.5 1 19 706 724 706 724 0.98

6 14 1.4e-06 0.025 15.6 13.2 4 18 771 785 764 786 0.86

7 14 2 3.5e+04 -4.7 1.6 5 10 815 820 815 820 0.90

8 14 0.00058 10 7.2 8.4 1 11 826 836 826 837 0.97

9 14 1.5 2.6e+04 -3.7 0.6 4 10 841 847 840 847 0.86

10 14 4.2e-10 7.4e-06 26.8 12.6 1 19 853 871 853 871 0.98

11 14 0.27 4.7e+03 -1.3 1.7 5 10 899 904 893 905 0.90

12 14 2 3.5e+04 -8.7 11.6 10 19 918 928 907 928 0.71

13 14 5.2e-08 0.00091 20.1 12.1 1 16 964 979 964 990 0.85

14 14 8e-06 0.14 13.1 13.6 1 19 996 1015 996 1015 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	2	3.5e+04	-4.4	1.6	15	19	550	554	549	554	0.81
2	14	0.069	1.2e+03	0.6	0.2	4	10	583	589	582	590	0.95
3	14	6.7e-06	0.12	13.4	13.8	3	19	598	614	597	614	0.91
4	14	9.5e-07	0.017	16.1	17.9	1	18	650	667	650	668	0.97
5	14	1.8e-08	0.00032	21.6	9.5	1	19	706	724	706	724	0.98
6	14	1.4e-06	0.025	15.6	13.2	4	18	771	785	764	786	0.86
7	14	2	3.5e+04	-4.7	1.6	5	10	815	820	815	820	0.90
8	14	0.00058	10	7.2	8.4	1	11	826	836	826	837	0.97
9	14	1.5	2.6e+04	-3.7	0.6	4	10	841	847	840	847	0.86
10	14	4.2e-10	7.4e-06	26.8	12.6	1	19	853	871	853	871	0.98
11	14	0.27	4.7e+03	-1.3	1.7	5	10	899	904	893	905	0.90
12	14	2	3.5e+04	-8.7	11.6	10	19	918	928	907	928	0.71
13	14	5.2e-08	0.00091	20.1	12.1	1	16	964	979	964	990	0.85
14	14	8e-06	0.14	13.1	13.6	1	19	996	1015	996	1015	0.97

Sequence Information

Coding Sequence: ATGGCCACATGGGATGGTTCTGATTCTAAACCAGAAGACcaaaattattacacatatttcaaTCAAAATGTTGCTGGTTCTGCAACAGGGACATGGACATATTTTCCCAGCAATGTAAATAATGAATACTTGCAATCTAATCGTGAATATTATGTGCAAAATGAACCTTTATACGAACCCAATGGCCCAAATACTTCTCATCGCACGAATACAGATGGTTGGCCAATTCCATCTGTCACCAATCTTTATCAGAAACATGTAATGAGCATAGTAGGTAATTCTCAAGTATCAAGTAATCCGAAATGTTTTACAAATAATCAACGAAGTTTCGTATCTGAAAACTGTTGGAAGGACGATTACAATTCAGGAATAACCAAAACTAAACGCAATTCtatagaaaaaatgaaaaagccaAGTAATTCAAGTCTTCATGTTATGGCTGAAGAGTTTGTGCCAAATAATGTAGAATTGAATGATAAAAGATGCGATTTACAAAATACAAAGCCTGTCAGTACTATAAATTCTGTCAAAAATAGtaatgaaacattaaataaaCAGACATTTTATAACACAAGCAGGTTTGAAAGAAAATACAATActaaaaaaaatgcaaattataAACCTAGAGAAGGACAACAAGATCAATTTTATAGGCGAAATATGTACAAAAATTCTTTTCAGCAACAAGGGAAAGCTTCTCATAAATTTCACGGTAATAAGTATGTtactaataaatattacttGGATAAACCACAAATAGATGTAAAAAGCATAGATGAAAATATGTTAGATAAAGAAATGATGAATGATAATAGTGGTTGTAAAAGTAACGAATTTTCTACAACAAACTTAAATGAGAAAGAATTATCTTTAAATGCGgaaacaaatttgaataatgatAAACAAATTCTAAACAGTAATGAACAGACTACTACTGTTAGAAatgaaaatgtacaagaaagtaATACAAAGCAGTATAATAATCAGATTAAGGAATTTTCTTACTATAATTCTGGTTCAAAACAATTTCATAATAATCGTAGGACTACAAAGAAGTATTCGTATAATGTTAAATACAACAGAGAGGAAAGCACCTTTAAAGAAAAGAAACGGAATTATCAAGGATATAACAGAGAAAATTACAGTAAAGAGCATAAATTTAAGGTAAAGGAGCAAATGTATAGCAATGGTGAACATGATGAGTTTAAGGAGTGTTATGAGAAGGAAATTGGATCCGAAGCAAAGGATctaaaagaaaaaaagtataattatcaagGATTTAATGATTCAAAAgaatataataaagaaaataaaaatgaaatatttaaagaaaaagacaaaaataaaagttatgtatttgaaaataatgaCAAAGGAAATGAACATTGGAGTAACAAAAGAGAAAGTGCTGAAAAGAGTAGTATTCAAAAATggggaaaaaataaaaaatctcttGTTGATGATGATGCAAATCAAAGAGAGAGATTAGCGGATCAACTAAGTAGAGGACAATTGGAATGTTTAGTGTGTTGCGAATACATTAAACAGAATGATTATATTTGGTCATGTTCTAATTGCTTCCATGTTTTACACTTAAAATGTATCAAGAAATGGGCAAAATCGTCGCAAGTGGAAAATGGTTGGAGATGCCCAGCGTGTCAAAATATGAGTGTAACAATTCCTGAAAACTGTTTTTGCTTTTGTGGCAAAACAAAAGCACCTGAATGGAATCGTAGAGATGTTGCACATTCTTGTGGTGAAGTGTGTGGTAGAGTACTATCAAAAAATTGTACGCATAAATGTACTCTTTTGTGCCATCCAGGGTCTTGTCCACAATGTACAGCAATGGTAACGAAGTATTGTGGTTGCGGTAAAACATCGCAAACGGTACAGTGCAGTGCACATAAGTTACTGTTATGTGATTCTACATGTGATAAGGATTTAAATTGTGGTAAGCACAAATGTGAAAGGCGATGTCATcatggagaatgtggaaattgtgaGAAAACAATAATGCAAAGATGTTATTGTGGTAAAAATACCAGAGAAGTAACATGTCAAAGCAATATTTCTCTTACTTATTCTTGTCAAACTACTTGTAATAAGTTATTAGAATGTGGTAATCATACTTGTACAAAGTTATGCCATGCTGATGATTGCGAGTCTTGTTCTTTGACCCCAGAGAAAATTACAACTTGTTGTTGCGGACAAACGCCGTTAACAGAAAAGAGACAAAGTTGTTTAGATCCAGTTCCAGTTTGTGATAAAGTATGCTCTAAAAAACTAAAATGTGGACAACCTAATAATCCTCATACCTGTAAAGCAAAATGTCATCAAGGAGATTGCCCTACATGCGATTTAACTACAGATGTCAAATGTCGTTGCGGAAATATGGACAGAGAAATAGCTTGTAAAGACTTAACGTCAAAAGCTGATGATGCTCGGTGTGAAAAAAGATGTACAAAGAAAAGATCTTGTGGCAAGCATAAATGTAATCAGTTATGTTGCATAGAAATAGAACATATTTGTCCACTGGTGTGTTCCAAAACTTTAAGTTGTGGTAGACATAAATGTGAACAAAGTTGTCATAaagGAAGATGTCAATCTTGTTGGCATAGTAGTTTTGACGAATTATATTGTGAATGTGGAGCTGCTGTAATATATCCTCCTGTCCCTTGTGGTACGAGAAGACCTACTTGTGAAAGGCCATGTTCGCGTCAGCACTCGTGTGGACACGAAGTTCTTCATAATTGTCACAGTGAGCCAACATGTCCTCCTTGTACTGTTCTTACTCAGAGATGGTGCCATGGTAAACATGAACTCAGAAAAGCTGTTCCGTGTTATGTTACTGAAATTTCATGTGGTTTGCCATGTAATAAACCTATATCATGCGGTCGACATAAGTGTATTAGTATCTGTCATTCTGGCCCGTGTGAAAAACCAGGACAACAATGTTCACAACCTTGCACTAATCCTAGGGAAATGTGTGGTCACATTTGTGCAGCTCCGTGTCACGAGGGTAAATGCCCAGATACTCCGTGTAAGGAGATGGTAAAGGTAACATGTCAATGTGGACATAGATCTATGTCTCGTGTATGTGCAGAAAATTCTACAGAATATCAGAGAATAGCAAGCAGTATATTAGCTAGTAAAATGACTGATATGCAACTTGGTCACTCTATTAATTTGGAACAAGTTTTTGGTCAAGGAGCAAAGAAGCAGAATCAGTTGAAAACTTTAGAATGCAATGATGAATGTAAAATAATAGAACGTAATAGGAGGTTGACACTAGGTTTGCAGATTGCTAATCCAGATTTAAGCGGAAAATTAATGCCTAAATATAGCGATTTCATGAAACAGTGGGCTAAGAAGAACCCACAGTTTTGTCAAATGGTTCATGATAAATTAACAGAGTTAGTTCAACTAGCCAAAACTTCGAAACAGAAATCTCGTAGTTACTCTTTTGATTGTATGAACAAAGATAAGCGCCATTTTGTTCATGAGTCTTGCGAACATTTTGGTTGTGAAAGTCAGGCGTATGATCAAGAGCCGAAAAGAAATGTTGTTGCTACTGCTATAAAAGATAAGTGTTGGTTACCAAGCTACAGTTTACTAGAAATCGTGCAACGAGAAAATGGTCAAAGAAAAGTTCCAGGTCCAATGCTGAATACCTTAAAAACCGATGGACCTGTAAAaacaatatTATCACTGCCTACACAAAGAAGTCAAAAATCAGAAATACAGTCCACCGTGAAGACAGCTGAACCAGAAATAGATTACTTTGATTACCATGGTTAA
Protein Sequence: MATWDGSDSKPEDQNYYTYFNQNVAGSATGTWTYFPSNVNNEYLQSNREYYVQNEPLYEPNGPNTSHRTNTDGWPIPSVTNLYQKHVMSIVGNSQVSSNPKCFTNNQRSFVSENCWKDDYNSGITKTKRNSIEKMKKPSNSSLHVMAEEFVPNNVELNDKRCDLQNTKPVSTINSVKNSNETLNKQTFYNTSRFERKYNTKKNANYKPREGQQDQFYRRNMYKNSFQQQGKASHKFHGNKYVTNKYYLDKPQIDVKSIDENMLDKEMMNDNSGCKSNEFSTTNLNEKELSLNAETNLNNDKQILNSNEQTTTVRNENVQESNTKQYNNQIKEFSYYNSGSKQFHNNRRTTKKYSYNVKYNREESTFKEKKRNYQGYNRENYSKEHKFKVKEQMYSNGEHDEFKECYEKEIGSEAKDLKEKKYNYQGFNDSKEYNKENKNEIFKEKDKNKSYVFENNDKGNEHWSNKRESAEKSSIQKWGKNKKSLVDDDANQRERLADQLSRGQLECLVCCEYIKQNDYIWSCSNCFHVLHLKCIKKWAKSSQVENGWRCPACQNMSVTIPENCFCFCGKTKAPEWNRRDVAHSCGEVCGRVLSKNCTHKCTLLCHPGSCPQCTAMVTKYCGCGKTSQTVQCSAHKLLLCDSTCDKDLNCGKHKCERRCHHGECGNCEKTIMQRCYCGKNTREVTCQSNISLTYSCQTTCNKLLECGNHTCTKLCHADDCESCSLTPEKITTCCCGQTPLTEKRQSCLDPVPVCDKVCSKKLKCGQPNNPHTCKAKCHQGDCPTCDLTTDVKCRCGNMDREIACKDLTSKADDARCEKRCTKKRSCGKHKCNQLCCIEIEHICPLVCSKTLSCGRHKCEQSCHKGRCQSCWHSSFDELYCECGAAVIYPPVPCGTRRPTCERPCSRQHSCGHEVLHNCHSEPTCPPCTVLTQRWCHGKHELRKAVPCYVTEISCGLPCNKPISCGRHKCISICHSGPCEKPGQQCSQPCTNPREMCGHICAAPCHEGKCPDTPCKEMVKVTCQCGHRSMSRVCAENSTEYQRIASSILASKMTDMQLGHSINLEQVFGQGAKKQNQLKTLECNDECKIIERNRRLTLGLQIANPDLSGKLMPKYSDFMKQWAKKNPQFCQMVHDKLTELVQLAKTSKQKSRSYSFDCMNKDKRHFVHESCEHFGCESQAYDQEPKRNVVATAIKDKCWLPSYSLLEIVQRENGQRKVPGPMLNTLKTDGPVKTILSLPTQRSQKSEIQSTVKTAEPEIDYFDYHG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01122771;
90% Identity: iTF_00964170;
80% Identity: -