Basic Information

Insect: Megachile rotundata
Gene Symbol: stc
Assembly: GCA_000220905.1
Location: NW:324773-330850[+]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 2 1e+04 -4.4 1.6 15 19 556 560 555 560 0.81

2 14 0.07 3.5e+02 0.5 0.2 4 10 589 595 588 596 0.95

3 14 6.7e-06 0.033 13.4 13.8 3 19 604 620 603 620 0.91

4 14 9.5e-07 0.0047 16.1 17.9 1 18 656 673 656 674 0.97

5 14 3.4e-08 0.00017 20.7 9.2 1 19 712 730 712 730 0.98

6 14 1.4e-06 0.007 15.5 13.2 4 18 777 791 770 792 0.86

7 14 2 1e+04 -4.7 1.6 5 10 821 826 821 826 0.90

8 14 0.00059 2.9 7.2 8.4 1 11 832 842 832 843 0.97

9 14 1.5 7.3e+03 -3.7 0.6 4 10 847 853 846 853 0.86

10 14 1e-09 5.1e-06 25.6 12.0 1 19 859 877 859 877 0.98

11 14 0.27 1.3e+03 -1.3 1.7 5 10 905 910 899 911 0.90

12 14 2 1e+04 -8.6 11.5 10 19 924 934 913 934 0.71

13 14 5.2e-08 0.00026 20.1 12.1 1 16 970 985 970 996 0.85

14 14 8.1e-06 0.04 13.1 13.6 1 19 1002 1021 1002 1021 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	2	1e+04	-4.4	1.6	15	19	556	560	555	560	0.81
2	14	0.07	3.5e+02	0.5	0.2	4	10	589	595	588	596	0.95
3	14	6.7e-06	0.033	13.4	13.8	3	19	604	620	603	620	0.91
4	14	9.5e-07	0.0047	16.1	17.9	1	18	656	673	656	674	0.97
5	14	3.4e-08	0.00017	20.7	9.2	1	19	712	730	712	730	0.98
6	14	1.4e-06	0.007	15.5	13.2	4	18	777	791	770	792	0.86
7	14	2	1e+04	-4.7	1.6	5	10	821	826	821	826	0.90
8	14	0.00059	2.9	7.2	8.4	1	11	832	842	832	843	0.97
9	14	1.5	7.3e+03	-3.7	0.6	4	10	847	853	846	853	0.86
10	14	1e-09	5.1e-06	25.6	12.0	1	19	859	877	859	877	0.98
11	14	0.27	1.3e+03	-1.3	1.7	5	10	905	910	899	911	0.90
12	14	2	1e+04	-8.6	11.5	10	19	924	934	913	934	0.71
13	14	5.2e-08	0.00026	20.1	12.1	1	16	970	985	970	996	0.85
14	14	8.1e-06	0.04	13.1	13.6	1	19	1002	1021	1002	1021	0.97

Sequence Information

Coding Sequence: ATGGCCACATGGGATGGTTCTGATTCTAAACCAGAAGaccaaaattattatacgtaTTTCAATCAAAATGTTGCTGGTTCTGCAACAGGAACATGGACATATTTTCCCAGCaatgtaaataatgaatatttacaatCTAATCGTgaatattatgtacaaaatgaaCCTTTATATGAGCCCAATGGCTCAAATACTTCTTATCGTACAAACACAGATGGTTGGCCAATTCAATCTGTGACCAATCTTTATCAGAAACATGTAATGAGCATAGTAGGTAATTCTCCAGTATCAAGTAATCcaaaatgttttacaaataatCAACAAAGTTTTGTATCTGAAAACTGTTGGAAGGATGATTACAATTCAGGAATAACCAAAACTAAACGCACTTCTgtggaaaaaatgaaaaaaccaAGTAATTCAAGTCTTCATGTTATGGCTGAAGAGTTTGTGCCAAATAATGTAGAATTGAACGATAAAAGATGcgaattacaaaatacaaagtCTGTTAGTACTATGAATTctgtcaaaaataataatgaaacattaaataaacagACATTTTATAACACGAACAGGCttgaaagaaaatacaatactaaaaaaaatgtaaattataaacctAGAGAAGGACAAGATCAATTTTATAAGcgaaatacatataaaaattcttttcagcAACAAGGGAAAGCTTCTCATAAATTTCAAGGTAATAAGTATGTTACTAATAAATACTACTCGGATAAACCACAAATAGATGTAAAAAGCACAGATGAAAATATGCTAGATAAAGAAACGATGAATGATAATAGTGGTTGTAAAAGTAATGAATTTTctacaacaaatttaaatgagaaagaattatctttaaatatggaaacaaatttgaataatgataaacaaattttaaacagaaacaGTAATGAACAGACTTCTACTGTTAGAAATGAAAACGTACAAGAAAATGATACAAAGCAGTATAATAATCAGATTAAGGAATTTGCTTACTATAATTCTGGTTCAAAACAGTTTCATAATAATCGTAGGACTACAAAGAAGTATTCgtataatgttaaatataacaGAGAGGAAAGCGCctttaaagaaaagaaacggaaTTATCAAGGATATAACAGAGAAAATTACAGTAAAGAGCATAAATTTAAGGTAAAGGAGCAAATGTATAGTAATGGTGAACATAATGAGTTTAAGGAGTGTTATGAGAAGGAAATTGGATTCGAAGcaaaggaaataaaagaaaaaaagtataattatcAAGGATTTAATGAAtcaaaagaatataataaagaaaacaaaaatgaaatatttaaagaaaaagacAGAAGTAAAAgttatgtatttgaaaataatgacAAAGGAAATGAACATTGGAGTAACAAAAGAGAAAGCACTGAAAGGAGTAGCATTCAAAAATggggaaaaaataaaagatctcTTGTTGttTATAACTATATAGATGATGATGCAAATCAAAGAGAGAGGTTAGCGGATCAGCTAAGTAGAGGACAGTTGGAATGTTTAGTGTGTTGCGAATACATTAAACAGAATGATTATATATGGTCTTGTTCTAATTGCTTCCatgttttacatttaaaatgtatCAAGAAATGGGCAAAATCGTCGCAAGTGGAAAATGGTTGGAGATGCCCAGCGTGTCAAAATATGAGCGTGACAATTCCTGAAAACTGTTTCTGCTTTTGTGGCAAAACAAAAGCACCTGAATGGAATCGTAGAGATGTTGCACATTCTTGTGGTGAAGTGTGTGGTAGAGTTCtatcaaaaaattgtacacaTAAGTGTACTCTTTTGTGCCATCCAGGGTCTTGTCCACAATGTACAGCAATGGTCACAAAGTATTGTGGTTGCGGTAAAACATCGCAAACGGTACAATGCAGTGCACATAAGTTACTGTTATGTGATTCTACATGTGATAAGGATTTAAATTGTGGTAAGCACAAATGTGAAAGGCGATGTCATcatggagaatgtggaaattgcgAGAAAACAATAATGCAAAgATGTTATTGTGATAAAAATACCAGAGAAGTGACATGTCAGAGCAATATTTCTCTTACTTATTCCTGTCAAACtacttgtaataaattactagAATGTGGTAATCATACTTGTACAAAGTTATGCCATGCTGATGCTTGCGAGTCTTGTTCTTTAACCCCGGAGAAAATTACAACTTGTTGCTGTGGACAAACGCCCTTAACAGAAAAGAGACAAAGTTGTTTAGATCCAGTTCCAGTTTGTGATAAAGTATGttctaaaaaactaaaatgtGGACAACCTAATAATCCTCATACCTGTAAAGCAAAATGCCATCAAGGAGATTGCCCTACTTGCGATTTAACTACAGATGTCAAATGTCGTTGCGGAAATATGGACAGAGAAATAGCTTGTAAAGACTTAACGTCAAAAGCTGACGATGCTCGGTGTGAAAAAAGATGTACAAAGAAAAGATCTTGTGGCAAGCATAAATGTAATCAGTTATGTTGCATAGAAATAGAACATATTTGTCCATTGGTGTGTTCCAAAACTTTAAGTTGTGGCAGACATAAATGTGATCAAAGTTGTCATAAagGAAGATGTCAATCTTGTTGGCATAGTAGTTTTGATGAATTATATTGTGAATGTGGAGCTGCTGTAATATATCCTCCTGTCCCTTGTGGTACGAGAAGACCTACTTGTGAAAGGCCATGTTCGCGTCAGCACTCGTGTGGACATGAAGTTCTACATAATTGTCACAGTGAACCAACATGTCCTCCTTGCACTGTTCTTACTCAGAGATGGTGCCATGGTAAACATGAACTCAGAAAAGCTGTTCCCTGTTATGTTACTGAAATTTCATGTGGTTTGCCATGTAATAAACCTATATCATGCGGTCGACATAAGTGTATTAGTATCTGTCATTCTGGTCCATGTGAAAAACCAGGACAACAATGCTCACAACCTTGCACTAATCCTAGGGAAATGTGTGGTCACATTTGTGCAGCTCCGTGTCATGAGGGTAAATGCCCAGATACTCCATGTAAGGAGATGGTAAAGGTAACATGTCAATGTGGACATAGATCTATGTCTCGTGTATGTGCAGAAAATTCTACAGAATATCAGAGAATAGCAAGCAGTATATTAGCTAGTAAAATGACTGATATGCAACTTGGTCATTCTATTAATTTGGAACAAGTTTTTGGCACAGGGGCAAAGAAGCAGAATCAGTTGAAAACTTTAGAATGCAAtgatgaatgtaaaataatagaacGTAATAGAAGATTGACACTAGGTTTGCAGATTGCTAATCCAGATTTAAGCGGAAAATTAATGCCTAAATATAGCGATTTCATGAAACAGTGGGCTAAGAAGAACCCACAGTTTTGTCAAATGGTTCATGATAAATTAACAGAGTTAGTTCAACTAGCCAAAACTTCGAAACAGAAATCTCGTAGTTACTCTTTTGATTGTATGAACAAAGATAAGCGTCATTTTGTTCATGAATCTTGTGAACATTTTGGCTGTGAAAGTCAGGCGTATGATCAAGAACCGAAAAGAAATGTTGTTGCTACTGCTATAAAAGATAAGTGTTGGTTACCAAGCTACAGTTTACTAGAAATCGTGCAACGAGAAAATGGTCAAAGAAAAGTTCCAGGTCCAATGCTGAATACCTTAAAAACCGATGGACCTGTGAAaacaaTATTATCACTGCCTACACAAAGAAATCAAAAACCAGAAACACAGTCCACCGTGAAGACAGCTGAACCAGAAATAGATTACTTTGATTACCATGGTTAA
Protein Sequence: MATWDGSDSKPEDQNYYTYFNQNVAGSATGTWTYFPSNVNNEYLQSNREYYVQNEPLYEPNGSNTSYRTNTDGWPIQSVTNLYQKHVMSIVGNSPVSSNPKCFTNNQQSFVSENCWKDDYNSGITKTKRTSVEKMKKPSNSSLHVMAEEFVPNNVELNDKRCELQNTKSVSTMNSVKNNNETLNKQTFYNTNRLERKYNTKKNVNYKPREGQDQFYKRNTYKNSFQQQGKASHKFQGNKYVTNKYYSDKPQIDVKSTDENMLDKETMNDNSGCKSNEFSTTNLNEKELSLNMETNLNNDKQILNRNSNEQTSTVRNENVQENDTKQYNNQIKEFAYYNSGSKQFHNNRRTTKKYSYNVKYNREESAFKEKKRNYQGYNRENYSKEHKFKVKEQMYSNGEHNEFKECYEKEIGFEAKEIKEKKYNYQGFNESKEYNKENKNEIFKEKDRSKSYVFENNDKGNEHWSNKRESTERSSIQKWGKNKRSLVVYNYIDDDANQRERLADQLSRGQLECLVCCEYIKQNDYIWSCSNCFHVLHLKCIKKWAKSSQVENGWRCPACQNMSVTIPENCFCFCGKTKAPEWNRRDVAHSCGEVCGRVLSKNCTHKCTLLCHPGSCPQCTAMVTKYCGCGKTSQTVQCSAHKLLLCDSTCDKDLNCGKHKCERRCHHGECGNCEKTIMQRCYCDKNTREVTCQSNISLTYSCQTTCNKLLECGNHTCTKLCHADACESCSLTPEKITTCCCGQTPLTEKRQSCLDPVPVCDKVCSKKLKCGQPNNPHTCKAKCHQGDCPTCDLTTDVKCRCGNMDREIACKDLTSKADDARCEKRCTKKRSCGKHKCNQLCCIEIEHICPLVCSKTLSCGRHKCDQSCHKGRCQSCWHSSFDELYCECGAAVIYPPVPCGTRRPTCERPCSRQHSCGHEVLHNCHSEPTCPPCTVLTQRWCHGKHELRKAVPCYVTEISCGLPCNKPISCGRHKCISICHSGPCEKPGQQCSQPCTNPREMCGHICAAPCHEGKCPDTPCKEMVKVTCQCGHRSMSRVCAENSTEYQRIASSILASKMTDMQLGHSINLEQVFGTGAKKQNQLKTLECNDECKIIERNRRLTLGLQIANPDLSGKLMPKYSDFMKQWAKKNPQFCQMVHDKLTELVQLAKTSKQKSRSYSFDCMNKDKRHFVHESCEHFGCESQAYDQEPKRNVVATAIKDKCWLPSYSLLEIVQRENGQRKVPGPMLNTLKTDGPVKTILSLPTQRNQKPETQSTVKTAEPEIDYFDYHG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01122771;
90% Identity: iTF_00963558; iTF_00962196; iTF_00962880;
80% Identity: -