Oros005797.1
Basic Information
- Insect
- Ormyrus rosae
- Gene Symbol
- retn_1
- Assembly
- GCA_035047165.1
- Location
- JAWWML010000031.1:13303500-13308925[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.7e-17 2.4e-13 51.1 0.0 29 89 4 62 1 62 0.93 2 2 2 8.3e+03 -1.9 0.0 5 21 181 200 179 249 0.56
Sequence Information
- Coding Sequence
- ATGGCGAAATCGGTGCTCGACCTCTTCGAGCTGTACAACCTGGTAATCGCTCGCGGTGGCCTCGTCGACGTCATCAACAAGAAGCTCTGGCAGGAAATCATCAAGGGACTGCACCTCCCGTCGAGCATAACCTCCGCCGCCTTCACACTGCGCACCCAATACATGAAATACCTGTACCCGTACGAGTGCGAGAAGAAGCACCTGTCCTCGCCGGCGGAGCTGCAGGCGGCGATCGACGGCAATCGGCGCGAGGGCCGCCGCAGCAACTACGGCAactacggcggcggcggcggctccgtcGACGGCCTCGTGCGCAGCCCGCACACCCCGGGCTCGCTCGCCTCCCTCCATCCGCTCTCGCTGGTCGCGGCGGCCGCCAGCGGCCAGCACCAGGTCGGACCGCAGAGCCTCGTCAACGGGAGCGCCGCCCACACGCCGATGCCCCACCATCCGCACCATCCGCAACACCAGCAGGGTGGCGGCCTCGGGCAGCCACTCAATGCAGGCATGGCGCCGGAGATCGAGGTGCGCGTGGCCGAGTACATGAAGCAGCTGCAGCGGGAGATGGGCAGAAAGGCGACGGGCTCGCCGGTCCAGCACCATCTCCCGAGCAACCTGAGCCCCTCGCCGCCGCCCCAGGCGTCGGCCGtccgctcgccgccgccgacgtccCGCGAGCAGGCCGCCTTCCTCGAGATGTCCCGTCTGACCCTCTGGAACATGTACAACAACAACATTCACCCCGGCCTCGGCTACGCTCAGGCCCCCTCGCCGCCCCACGGATCGCACTCACCCCCGCCGCAGCCGATGAGCCCCGAGCCGCAGAAGGAGGCACTCGACCTTGGATTGAGATCCTCACCGAGCTCATCGTCGACTCGCCACAGTCCGCCGTCATCCAACGGCAGCATGAACATCAAGCGCGAGGTGGACACCGTCGTTTCTCCCCACACTTCCGCCGCCAACAAGAGGCTCTGCAGGGACGAGGACAGTCCTCCAAGAGAGACTGTTCCTTCCGCTCTCCCAGGCACACACATCAAGATCGCAAACAGAGGCGACGGTCGCGATAACTCACTCGTAGTCAGTATGGAACTCAACGGAGTCATGTACCAAGGTGTGCTCTTCGCCCAGACAGACGGCAGCGTTGCTGCTAACAATAACGAGAACAAGGCCTCGACTCGCAACGTCGTCTCGTGA
- Protein Sequence
- MAKSVLDLFELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKHLSSPAELQAAIDGNRREGRRSNYGNYGGGGGSVDGLVRSPHTPGSLASLHPLSLVAAAASGQHQVGPQSLVNGSAAHTPMPHHPHHPQHQQGGGLGQPLNAGMAPEIEVRVAEYMKQLQREMGRKATGSPVQHHLPSNLSPSPPPQASAVRSPPPTSREQAAFLEMSRLTLWNMYNNNIHPGLGYAQAPSPPHGSHSPPPQPMSPEPQKEALDLGLRSSPSSSSTRHSPPSSNGSMNIKREVDTVVSPHTSAANKRLCRDEDSPPRETVPSALPGTHIKIANRGDGRDNSLVVSMELNGVMYQGVLFAQTDGSVAANNNENKASTRNVVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01113207;
- 90% Identity
- iTF_01109893; iTF_01111544; iTF_01110710;
- 80% Identity
- iTF_01109893;