Opom011502.1
Basic Information
- Insect
- Ormyrus pomaceus
- Gene Symbol
- retn
- Assembly
- GCA_900474385.1
- Location
- UCOM01000911.1:26652-32173[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.4e-17 1.7e-13 51.1 0.0 29 89 4 62 1 62 0.93 2 2 1.5 5.8e+03 -1.9 0.0 5 21 185 204 183 253 0.56
Sequence Information
- Coding Sequence
- ATGGCGAAATCGGTCCTCGACCTCTTCGAGCTGTACAACCTGGTAATCGCTCGCGGTGGCCTCGTCGACGTCATCAACAAGAAGCTCTGGCAGGAAATCATCAAGGGACTGCACCTCCCGTCGAGCATAACCTCCGCCGCCTTCACACTGCGCACCCAATACATGAAATACCTGTACCCGTACGAGTGCGAGAAGAAGCACCTGTCCTCGCCGGCGGAGCTGCAGGCGGCGATCGACGGCAATCGGCGCGAGGGTCGCCGCAGCAACTACGGCAactacggcggcggcggcggcgccgtcGACGGCCTCGTGCGCAGTCCGCACACCCCGGGCTCGCTCGCCTCCCTCCACCCGCTCTCCCTGGTGGCTGCGGCGGCCAGCGGCCAGCACCAGGTCGGCCCGCAGGGCCTCGTCAACGGGAGCGCCGCCCACACGCCGATGCCCCACCATCCGCACCATCCGCAGCACCAGCAGGGCGGCGGCCTCGGCCAGCCGCTCAATGCAGCTCTCTTTCCAGGCATGGCGCCGGAGATCGAGGTGCGCGTGGCCGAGTACATGAAGCAGCTGCAGCGGGAGATGGGCAGAAAGGCGACGGGCTCGCCGGTCCAGCACCACCTCCCGAGCAACCTGAGCCCCTCGCCGCCGCCCCAGGCATCGGCGgtgcgctcgccgccgcccaCGTCGCGCGAGCAGGCCGCCTTCCTCGAGATGTCCCGTCTGACCCTCTGGAACATGTACAACAACAACATTCACCCCGGCCTCGGCTACGCTCAGGCCCCCTCGCCGCCCCACGGATCGCACTCGCCGCCGCCCCAGCCGATGAGCCCCGAGCCGCAGAAGGAGGCGCTCGACCTTGGATTGAGATCCTCCCCGAGCTCATCGTCGACTCGCCACAGTCCGCCGTCATCCAACGGCAGCATGAACATCAAGCGCGAGGTGGACACCGTCGTTTCTCCCCACACTTCCGCCGCCAACAAGAGGCTCTGCAGGGACGAGGACAGTCCTCCAAGAGAGACTGTTACTTCCGCTCTCCCAGGCACACACATCAAGATCGCAAACAGAGGTGACGGTCGCGATAACTCACTCGTAGTCAGTATGGAACTCAACGGAGTCATGTACCAAGGTGTGCTCTTCGCCCAGACAGACGGCAGCGTTGCTGCTAACAACAACGAGAACAAGGCCTCGACTCGCAACGTCGTCTCGTGA
- Protein Sequence
- MAKSVLDLFELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKHLSSPAELQAAIDGNRREGRRSNYGNYGGGGGAVDGLVRSPHTPGSLASLHPLSLVAAAASGQHQVGPQGLVNGSAAHTPMPHHPHHPQHQQGGGLGQPLNAALFPGMAPEIEVRVAEYMKQLQREMGRKATGSPVQHHLPSNLSPSPPPQASAVRSPPPTSREQAAFLEMSRLTLWNMYNNNIHPGLGYAQAPSPPHGSHSPPPQPMSPEPQKEALDLGLRSSPSSSSTRHSPPSSNGSMNIKREVDTVVSPHTSAANKRLCRDEDSPPRETVTSALPGTHIKIANRGDGRDNSLVVSMELNGVMYQGVLFAQTDGSVAANNNENKASTRNVVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01113207;
- 90% Identity
- iTF_01112367;
- 80% Identity
- -